Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.00154/0.00154, allocations: 111.3 kB / 15.23 MB, free: 0.6602 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001757/0.001757, allocations: 194.2 kB / 16.13 MB, free: 6.668 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.283/1.283, allocations: 222.9 MB / 239.8 MB, free: 4.594 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1727/0.1727, allocations: 12.27 MB / 302.2 MB, free: 1.305 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.001091/0.001091, allocations: 59.91 kB / 365.1 MB, free: 10.26 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09639/0.09749, allocations: 52.08 MB / 417.2 MB, free: 6.066 MB / 350.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.1695/0.2671, allocations: 8.876 MB / 426 MB, free: 35.93 MB / 350.1 MB
Notification: Performance of NFInst.instExpressions: time 0.003834/0.2709, allocations: 2.362 MB / 428.4 MB, free: 35.64 MB / 350.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001114/0.2721, allocations: 122.7 kB / 428.5 MB, free: 35.64 MB / 350.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.0009909/0.2731, allocations: 289.3 kB / 428.8 MB, free: 35.61 MB / 350.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.001302/0.2744, allocations: 447.7 kB / 429.2 MB, free: 35.31 MB / 350.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0008818/0.2753, allocations: 0.5043 MB / 429.8 MB, free: 35.04 MB / 350.1 MB
Notification: Performance of NFFlatten.flatten: time 0.001348/0.2767, allocations: 2.157 MB / 431.9 MB, free: 33.91 MB / 350.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001124/0.2778, allocations: 1.113 MB / 433 MB, free: 33.44 MB / 350.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0007136/0.2786, allocations: 0.8109 MB / 433.8 MB, free: 33.05 MB / 350.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0006378/0.2792, allocations: 1.006 MB / 434.8 MB, free: 32.51 MB / 350.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.000237/0.2794, allocations: 182.8 kB / 435 MB, free: 32.51 MB / 350.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002872/0.2797, allocations: 177.9 kB / 435.2 MB, free: 32.51 MB / 350.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0002895/0.28, allocations: 453 kB / 435.6 MB, free: 32.21 MB / 350.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.0009491/0.281, allocations: 1.127 MB / 436.8 MB, free: 31.51 MB / 350.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.002424/0.2834, allocations: 3.275 MB / 440 MB, free: 30.26 MB / 350.1 MB
Notification: Performance of FrontEnd - DAE generated: time 7.724e-06/0.2834, allocations: 0 / 440 MB, free: 30.26 MB / 350.1 MB
Notification: Performance of FrontEnd: time 1.473e-06/0.2835, allocations: 3.062 kB / 440 MB, free: 30.26 MB / 350.1 MB
Notification: Performance of Transformations before backend: time 7.502e-05/0.2835, allocations: 0.9375 kB / 440 MB, free: 30.26 MB / 350.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.004174/0.2877, allocations: 2.349 MB / 442.4 MB, free: 28.88 MB / 350.1 MB
Notification: Performance of prepare preOptimizeDAE: time 5.632e-05/0.2878, allocations: 11.56 kB / 442.4 MB, free: 28.88 MB / 350.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0003981/0.2882, allocations: 237.7 kB / 442.6 MB, free: 28.77 MB / 350.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003496/0.2886, allocations: 419.1 kB / 443 MB, free: 28.38 MB / 350.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001914/0.2888, allocations: 256.7 kB / 443.3 MB, free: 28.22 MB / 350.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002655/0.289, allocations: 279.9 kB / 443.6 MB, free: 28.12 MB / 350.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003323/0.2924, allocations: 2.394 MB / 446 MB, free: 27.05 MB / 350.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 5.982e-05/0.2924, allocations: 14.91 kB / 446 MB, free: 27.04 MB / 350.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001588/0.2926, allocations: 109.1 kB / 446.1 MB, free: 26.95 MB / 350.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.477e-05/0.2926, allocations: 66.41 kB / 446.1 MB, free: 26.95 MB / 350.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002671/0.2953, allocations: 1.675 MB / 447.8 MB, free: 26.34 MB / 350.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009581/0.3049, allocations: 8.46 MB / 456.3 MB, free: 21.16 MB / 350.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001819/0.3067, allocations: 1.585 MB / 457.9 MB, free: 20.14 MB / 350.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0007454/0.3075, allocations: 0.5414 MB / 458.4 MB, free: 19.89 MB / 350.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 6.297e-05/0.3076, allocations: 17.31 kB / 458.4 MB, free: 19.89 MB / 350.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.193e-05/0.3076, allocations: 55.73 kB / 458.5 MB, free: 19.84 MB / 350.1 MB
Notification: Performance of pre-optimization done (n=139): time 3.918e-06/0.3076, allocations: 0 / 458.5 MB, free: 19.84 MB / 350.1 MB
Notification: Performance of matching and sorting (n=171): time 0.02325/0.3309, allocations: 9.114 MB / 467.6 MB, free: 16.42 MB / 350.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.557e-05/0.3309, allocations: 178.2 kB / 467.8 MB, free: 16.23 MB / 350.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004812/0.3314, allocations: 489.3 kB / 468.2 MB, free: 15.98 MB / 350.1 MB
Notification: Performance of collectPreVariables (initialization): time 7.277e-05/0.3315, allocations: 55.05 kB / 468.3 MB, free: 15.93 MB / 350.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0004198/0.3319, allocations: 0.9457 MB / 469.2 MB, free: 15.2 MB / 350.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003733/0.3323, allocations: 0.6299 MB / 469.9 MB, free: 14.69 MB / 350.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004627/0.3328, allocations: 351.8 kB / 470.2 MB, free: 14.51 MB / 350.1 MB
Notification: Performance of setup shared object (initialization): time 6.075e-05/0.3329, allocations: 324.6 kB / 470.5 MB, free: 14.2 MB / 350.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0012/0.3341, allocations: 0.6606 MB / 471.2 MB, free: 13.93 MB / 350.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001453/0.3355, allocations: 1.188 MB / 472.4 MB, free: 12.93 MB / 350.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.01652/0.3521, allocations: 4.784 MB / 477.2 MB, free: 10.85 MB / 350.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.564e-05/0.3521, allocations: 4.969 kB / 477.2 MB, free: 10.85 MB / 350.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.003902/0.356, allocations: 2.109 MB / 479.3 MB, free: 9.934 MB / 350.1 MB
Notification: Performance of prepare postOptimizeDAE: time 3.83e-05/0.3561, allocations: 17.66 kB / 479.3 MB, free: 9.93 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.366e-05/0.3561, allocations: 18.91 kB / 479.3 MB, free: 9.93 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 5.822e-05/0.3562, allocations: 36.09 kB / 479.3 MB, free: 9.926 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002625/0.3588, allocations: 0.6438 MB / 480 MB, free: 9.867 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 4.705e-05/0.3589, allocations: 50.05 kB / 480 MB, free: 9.852 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001143/0.36, allocations: 150.4 kB / 480.2 MB, free: 9.793 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.000131/0.3602, allocations: 92.88 kB / 480.3 MB, free: 9.773 MB / 350.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0)))))) start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))))) start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))) start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 2340000000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16100000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16800000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 580000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.00113/0.3613, allocations: 0.6474 MB / 480.9 MB, free: 9.359 MB / 350.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002307/0.3615, allocations: 97.69 kB / 481 MB, free: 9.309 MB / 350.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002455/0.364, allocations: 1.444 MB / 482.5 MB, free: 8.652 MB / 350.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.947e-05/0.364, allocations: 17.28 kB / 482.5 MB, free: 8.652 MB / 350.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.285e-05/0.3641, allocations: 2.125 kB / 482.5 MB, free: 8.652 MB / 350.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.555e-05/0.3641, allocations: 9.984 kB / 482.5 MB, free: 8.652 MB / 350.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.006088/0.3702, allocations: 3.587 MB / 486.1 MB, free: 6.984 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.983e-06/0.3702, allocations: 2.312 kB / 486.1 MB, free: 6.984 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002477/0.3727, allocations: 481.1 kB / 486.6 MB, free: 6.949 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 1.002e-05/0.3727, allocations: 7.75 kB / 486.6 MB, free: 6.949 MB / 350.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001251/0.3728, allocations: 58.69 kB / 486.6 MB, free: 6.918 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 9.839e-06/0.3728, allocations: 13.2 kB / 486.6 MB, free: 6.914 MB / 350.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.244e-06/0.3728, allocations: 0 / 486.6 MB, free: 6.914 MB / 350.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003427/0.3763, allocations: 2.504 MB / 489.1 MB, free: 5.602 MB / 350.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002012/0.3765, allocations: 155.7 kB / 489.3 MB, free: 5.457 MB / 350.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001629/0.3767, allocations: 52.55 kB / 489.3 MB, free: 5.422 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0009106/0.3776, allocations: 105.8 kB / 489.4 MB, free: 5.379 MB / 350.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002136/0.3778, allocations: 115.2 kB / 489.6 MB, free: 5.328 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.994e-05/0.3779, allocations: 51.03 kB / 489.6 MB, free: 5.285 MB / 350.1 MB
Notification: Performance of sorting global known variables: time 0.0002554/0.3781, allocations: 302.1 kB / 489.9 MB, free: 5.027 MB / 350.1 MB
Notification: Performance of sort global known variables: time 1.3e-07/0.3782, allocations: 0 / 489.9 MB, free: 5.027 MB / 350.1 MB
Notification: Performance of remove unused functions: time 0.001473/0.3796, allocations: 424 kB / 490.3 MB, free: 4.613 MB / 350.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001623/0.3798, allocations: 156.2 kB / 490.5 MB, free: 4.457 MB / 350.1 MB
Notification: Performance of simCode: created initialization part: time 0.002272/0.3821, allocations: 1.652 MB / 492.1 MB, free: 2.945 MB / 350.1 MB
Notification: Performance of simCode: created event and clocks part: time 2.525e-06/0.3821, allocations: 0 / 492.1 MB, free: 2.945 MB / 350.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.0009957/0.3831, allocations: 0.751 MB / 492.9 MB, free: 2.262 MB / 350.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001127/0.3842, allocations: 212.6 kB / 493.1 MB, free: 2.094 MB / 350.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.007553/0.3918, allocations: 5.942 MB / 499 MB, free: 12.32 MB / 366.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001039/0.3929, allocations: 1.366 MB / 0.4887 GB, free: 10.91 MB / 366.1 MB
Notification: Performance of simCode: alias equations: time 0.000877/0.3937, allocations: 166.7 kB / 0.4888 GB, free: 10.75 MB / 366.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003805/0.3941, allocations: 107.4 kB / 0.4889 GB, free: 10.64 MB / 366.1 MB
Notification: Performance of SimCode: time 2.41e-07/0.3941, allocations: 4 kB / 0.4889 GB, free: 10.64 MB / 366.1 MB
Notification: Performance of Templates: time 0.02652/0.4207, allocations: 15.19 MB / 0.5038 GB, free: 11.62 MB / 382.1 MB
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel  -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)