Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001577/0.001577, allocations: 100.1 kB / 15.88 MB, free: 12 kB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001905/0.001905, allocations: 195.6 kB / 16.79 MB, free: 6.809 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 2.053/2.053, allocations: 222.9 MB / 240.5 MB, free: 4.645 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.2556/0.2556, allocations: 12.27 MB / 302.9 MB, free: 1.41 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.002127/0.002127, allocations: 63.89 kB / 365.8 MB, free: 10.27 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1389/0.1411, allocations: 52.07 MB / 417.8 MB, free: 6.082 MB / 350.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.2948/0.436, allocations: 8.876 MB / 426.7 MB, free: 35.99 MB / 350.1 MB
Notification: Performance of NFInst.instExpressions: time 0.007233/0.4433, allocations: 2.359 MB / 429.1 MB, free: 35.7 MB / 350.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002813/0.4461, allocations: 123.2 kB / 429.2 MB, free: 35.7 MB / 350.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.002342/0.4485, allocations: 296.5 kB / 429.5 MB, free: 35.66 MB / 350.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.003815/0.4524, allocations: 434.6 kB / 429.9 MB, free: 35.37 MB / 350.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.002615/0.4551, allocations: 0.5065 MB / 430.4 MB, free: 35.09 MB / 350.1 MB
Notification: Performance of NFFlatten.flatten: time 0.004837/0.4599, allocations: 2.165 MB / 432.6 MB, free: 33.96 MB / 350.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.003224/0.4632, allocations: 1.116 MB / 433.7 MB, free: 33.48 MB / 350.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002086/0.4654, allocations: 0.8084 MB / 434.5 MB, free: 33.09 MB / 350.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002019/0.4674, allocations: 1.001 MB / 435.5 MB, free: 32.55 MB / 350.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0009377/0.4684, allocations: 181.2 kB / 435.7 MB, free: 32.55 MB / 350.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.001191/0.4696, allocations: 181.2 kB / 435.8 MB, free: 32.55 MB / 350.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0007781/0.4704, allocations: 462.4 kB / 436.3 MB, free: 32.25 MB / 350.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.00231/0.4728, allocations: 1.121 MB / 437.4 MB, free: 31.55 MB / 350.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.003504/0.4763, allocations: 2.753 MB / 440.2 MB, free: 30.65 MB / 350.1 MB
Notification: Performance of FrontEnd - DAE generated: time 1.137e-05/0.4763, allocations: 0 / 440.2 MB, free: 30.65 MB / 350.1 MB
Notification: Performance of FrontEnd: time 1.724e-06/0.4764, allocations: 0 / 440.2 MB, free: 30.65 MB / 350.1 MB
Notification: Performance of Transformations before backend: time 0.0001796/0.4765, allocations: 1.281 kB / 440.2 MB, free: 30.65 MB / 350.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.00788/0.4845, allocations: 2.355 MB / 442.5 MB, free: 29.27 MB / 350.1 MB
Notification: Performance of prepare preOptimizeDAE: time 6.047e-05/0.4845, allocations: 9.406 kB / 442.5 MB, free: 29.27 MB / 350.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0009228/0.4855, allocations: 239.6 kB / 442.8 MB, free: 29.15 MB / 350.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0006348/0.4861, allocations: 413.8 kB / 443.2 MB, free: 28.77 MB / 350.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0004178/0.4866, allocations: 256.9 kB / 443.4 MB, free: 28.61 MB / 350.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0008185/0.4874, allocations: 279.1 kB / 443.7 MB, free: 28.51 MB / 350.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.007836/0.4953, allocations: 2.393 MB / 446.1 MB, free: 27.44 MB / 350.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 0.000196/0.4955, allocations: 17.69 kB / 446.1 MB, free: 27.43 MB / 350.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0005227/0.4961, allocations: 109.4 kB / 446.2 MB, free: 27.34 MB / 350.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 8.475e-05/0.4962, allocations: 67.47 kB / 446.3 MB, free: 27.34 MB / 350.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.005706/0.5019, allocations: 1.676 MB / 448 MB, free: 26.73 MB / 350.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0201/0.5221, allocations: 8.458 MB / 456.4 MB, free: 21.56 MB / 350.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.003232/0.5253, allocations: 1.581 MB / 458 MB, free: 20.54 MB / 350.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001481/0.5269, allocations: 0.5461 MB / 458.5 MB, free: 20.29 MB / 350.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0001345/0.527, allocations: 13.19 kB / 458.6 MB, free: 20.29 MB / 350.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.717e-05/0.5271, allocations: 49.75 kB / 458.6 MB, free: 20.23 MB / 350.1 MB
Notification: Performance of pre-optimization done (n=139): time 7.033e-06/0.5271, allocations: 4 kB / 458.6 MB, free: 20.23 MB / 350.1 MB
Notification: Performance of matching and sorting (n=171): time 0.03783/0.565, allocations: 9.107 MB / 467.7 MB, free: 16.82 MB / 350.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001224/0.5651, allocations: 182 kB / 467.9 MB, free: 16.62 MB / 350.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0009966/0.5662, allocations: 492.6 kB / 468.4 MB, free: 16.38 MB / 350.1 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002634/0.5664, allocations: 55.48 kB / 468.4 MB, free: 16.32 MB / 350.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0006787/0.5671, allocations: 0.9451 MB / 469.4 MB, free: 15.59 MB / 350.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0007297/0.5679, allocations: 0.6301 MB / 470 MB, free: 15.09 MB / 350.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0009927/0.5689, allocations: 344.7 kB / 470.3 MB, free: 14.92 MB / 350.1 MB
Notification: Performance of setup shared object (initialization): time 7.982e-05/0.569, allocations: 324.3 kB / 470.7 MB, free: 14.61 MB / 350.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.00208/0.5711, allocations: 0.6685 MB / 471.3 MB, free: 14.33 MB / 350.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.002247/0.5734, allocations: 1.182 MB / 472.5 MB, free: 13.33 MB / 350.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0239/0.5973, allocations: 4.792 MB / 477.3 MB, free: 11.24 MB / 350.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 4.605e-05/0.5974, allocations: 5.844 kB / 477.3 MB, free: 11.24 MB / 350.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.006681/0.6041, allocations: 2.114 MB / 479.4 MB, free: 10.32 MB / 350.1 MB
Notification: Performance of prepare postOptimizeDAE: time 6.181e-05/0.6042, allocations: 18.52 kB / 479.4 MB, free: 10.32 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.839e-05/0.6042, allocations: 18.09 kB / 479.5 MB, free: 10.32 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.0001079/0.6044, allocations: 30.88 kB / 479.5 MB, free: 10.32 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.00418/0.6086, allocations: 0.6451 MB / 480.1 MB, free: 10.26 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.0001336/0.6087, allocations: 42.52 kB / 480.2 MB, free: 10.25 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.00227/0.611, allocations: 152.9 kB / 480.3 MB, free: 10.19 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0004076/0.6115, allocations: 89.95 kB / 480.4 MB, free: 10.18 MB / 350.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0)))))) start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))))) start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))) start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 2340000000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16100000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16800000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 580000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.002358/0.6138, allocations: 0.6493 MB / 481.1 MB, free: 9.758 MB / 350.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0005574/0.6144, allocations: 106.5 kB / 481.2 MB, free: 9.699 MB / 350.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.004417/0.6188, allocations: 1.434 MB / 482.6 MB, free: 9.051 MB / 350.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 4.114e-05/0.6189, allocations: 18.19 kB / 482.6 MB, free: 9.051 MB / 350.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.5e-05/0.619, allocations: 1.094 kB / 482.6 MB, free: 9.051 MB / 350.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 4.231e-05/0.619, allocations: 10.28 kB / 482.6 MB, free: 9.051 MB / 350.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.01166/0.6307, allocations: 3.594 MB / 486.2 MB, free: 7.379 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 2.114e-05/0.6308, allocations: 2.969 kB / 486.2 MB, free: 7.379 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.003699/0.6345, allocations: 476.4 kB / 486.7 MB, free: 7.348 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 5.087e-05/0.6346, allocations: 11.69 kB / 486.7 MB, free: 7.344 MB / 350.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0003139/0.6349, allocations: 62.33 kB / 486.8 MB, free: 7.309 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.693e-05/0.635, allocations: 12.86 kB / 486.8 MB, free: 7.305 MB / 350.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 5.651e-06/0.635, allocations: 1.812 kB / 486.8 MB, free: 7.305 MB / 350.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.005821/0.6408, allocations: 2.499 MB / 489.3 MB, free: 5.996 MB / 350.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0004883/0.6413, allocations: 157.6 kB / 489.4 MB, free: 5.852 MB / 350.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0003413/0.6417, allocations: 51.67 kB / 489.5 MB, free: 5.816 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.00171/0.6434, allocations: 102.5 kB / 489.6 MB, free: 5.777 MB / 350.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003784/0.6438, allocations: 106.7 kB / 489.7 MB, free: 5.766 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001782/0.644, allocations: 53 kB / 489.7 MB, free: 5.754 MB / 350.1 MB
Notification: Performance of sorting global known variables: time 0.000584/0.6446, allocations: 302.8 kB / 490 MB, free: 5.516 MB / 350.1 MB
Notification: Performance of sort global known variables: time 4.31e-07/0.6446, allocations: 0 / 490 MB, free: 5.516 MB / 350.1 MB
Notification: Performance of remove unused functions: time 0.002819/0.6475, allocations: 429.5 kB / 490.4 MB, free: 5.098 MB / 350.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0003619/0.6479, allocations: 158.6 kB / 490.6 MB, free: 4.941 MB / 350.1 MB
Notification: Performance of simCode: created initialization part: time 0.004272/0.6521, allocations: 1.649 MB / 492.3 MB, free: 3.43 MB / 350.1 MB
Notification: Performance of simCode: created event and clocks part: time 6.352e-06/0.6522, allocations: 0 / 492.3 MB, free: 3.43 MB / 350.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.001759/0.654, allocations: 0.7574 MB / 493 MB, free: 2.742 MB / 350.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002262/0.6562, allocations: 207.8 kB / 493.2 MB, free: 2.578 MB / 350.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.01282/0.6691, allocations: 5.987 MB / 499.2 MB, free: 12.8 MB / 366.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001549/0.6707, allocations: 1.371 MB / 0.4888 GB, free: 11.44 MB / 366.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0009093/0.6716, allocations: 123.4 kB / 0.489 GB, free: 11.32 MB / 366.1 MB
Notification: Performance of SimCode: time 1.002e-06/0.6716, allocations: 0 / 0.489 GB, free: 11.32 MB / 366.1 MB
Notification: Performance of Templates: time 0.04242/0.7141, allocations: 18.82 MB / 0.5073 GB, free: 8.508 MB / 382.1 MB
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel  -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)