Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0009119/0.000912, allocations: 96.14 kB / 16.03 MB, free: 68 kB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.0009923/0.0009923, allocations: 185.7 kB / 16.92 MB, free: 6.691 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.304/1.304, allocations: 223.3 MB / 241 MB, free: 5.34 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1654/0.1654, allocations: 12.26 MB / 304.4 MB, free: 2.07 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.0002792/0.0002793, allocations: 8 kB / 368.2 MB, free: 9.473 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.07683/0.07712, allocations: 53.08 MB / 421.3 MB, free: 4.277 MB / 350.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.1538/0.2309, allocations: 8.202 MB / 429.5 MB, free: 34.77 MB / 350.1 MB
Notification: Performance of NFInst.instExpressions: time 0.002838/0.2338, allocations: 2.36 MB / 431.8 MB, free: 34.3 MB / 350.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0005352/0.2344, allocations: 119.6 kB / 432 MB, free: 34.3 MB / 350.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.000367/0.2347, allocations: 293.2 kB / 432.3 MB, free: 34.2 MB / 350.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.0008631/0.2356, allocations: 440.9 kB / 432.7 MB, free: 34.02 MB / 350.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0007243/0.2363, allocations: 0.5044 MB / 433.2 MB, free: 34.02 MB / 350.1 MB
Notification: Performance of NFFlatten.flatten: time 0.001272/0.2376, allocations: 2.161 MB / 435.3 MB, free: 33.5 MB / 350.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001137/0.2388, allocations: 1.092 MB / 436.4 MB, free: 33.25 MB / 350.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0004443/0.2392, allocations: 0.6805 MB / 437.1 MB, free: 32.95 MB / 350.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0005841/0.2398, allocations: 0.8373 MB / 438 MB, free: 32.53 MB / 350.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0001544/0.24, allocations: 111.5 kB / 438.1 MB, free: 32.53 MB / 350.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0001955/0.2402, allocations: 113.9 kB / 438.2 MB, free: 32.53 MB / 350.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0001796/0.2404, allocations: 366.4 kB / 438.5 MB, free: 32.3 MB / 350.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005408/0.2409, allocations: 1.029 MB / 439.6 MB, free: 31.65 MB / 350.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.001301/0.2422, allocations: 2.684 MB / 442.2 MB, free: 31.1 MB / 350.1 MB
Notification: Performance of FrontEnd - DAE generated: time 3.246e-06/0.2422, allocations: 0 / 442.2 MB, free: 31.1 MB / 350.1 MB
Notification: Performance of FrontEnd: time 1.292e-06/0.2422, allocations: 1.281 kB / 442.2 MB, free: 31.1 MB / 350.1 MB
Notification: Performance of Transformations before backend: time 2.214e-05/0.2423, allocations: 0 / 442.2 MB, free: 31.1 MB / 350.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.002744/0.245, allocations: 1.905 MB / 444.2 MB, free: 30.02 MB / 350.1 MB
Notification: Performance of prepare preOptimizeDAE: time 3.033e-05/0.2451, allocations: 9.688 kB / 444.2 MB, free: 30.02 MB / 350.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002558/0.2453, allocations: 233 kB / 444.4 MB, free: 29.91 MB / 350.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002108/0.2455, allocations: 420.6 kB / 444.8 MB, free: 29.52 MB / 350.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001725/0.2457, allocations: 259.1 kB / 445.1 MB, free: 29.36 MB / 350.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002688/0.246, allocations: 277.5 kB / 445.3 MB, free: 29.27 MB / 350.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003309/0.2493, allocations: 2.403 MB / 447.7 MB, free: 28.19 MB / 350.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 6.922e-05/0.2494, allocations: 14.39 kB / 447.7 MB, free: 28.18 MB / 350.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001642/0.2496, allocations: 113.2 kB / 447.9 MB, free: 28.09 MB / 350.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.667e-05/0.2496, allocations: 69.19 kB / 447.9 MB, free: 28.09 MB / 350.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002792/0.2524, allocations: 1.691 MB / 449.6 MB, free: 27.48 MB / 350.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009246/0.2617, allocations: 8.451 MB / 458.1 MB, free: 22.31 MB / 350.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001841/0.2635, allocations: 1.6 MB / 459.7 MB, free: 21.28 MB / 350.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0007984/0.2643, allocations: 0.5533 MB / 460.2 MB, free: 21.03 MB / 350.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.194e-05/0.2644, allocations: 12.97 kB / 460.2 MB, free: 21.03 MB / 350.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.479e-05/0.2644, allocations: 54.03 kB / 460.3 MB, free: 20.97 MB / 350.1 MB
Notification: Performance of pre-optimization done (n=139): time 2.605e-06/0.2644, allocations: 0 / 460.3 MB, free: 20.97 MB / 350.1 MB
Notification: Performance of matching and sorting (n=171): time 0.02428/0.2887, allocations: 9.233 MB / 469.5 MB, free: 17.55 MB / 350.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.753e-05/0.2888, allocations: 178.2 kB / 469.7 MB, free: 17.36 MB / 350.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004623/0.2892, allocations: 494.7 kB / 470.2 MB, free: 17.11 MB / 350.1 MB
Notification: Performance of collectPreVariables (initialization): time 7.998e-05/0.2893, allocations: 56.83 kB / 470.2 MB, free: 17.05 MB / 350.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003672/0.2897, allocations: 0.9491 MB / 471.2 MB, free: 16.32 MB / 350.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003316/0.29, allocations: 0.625 MB / 471.8 MB, free: 15.82 MB / 350.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002052/0.2903, allocations: 185.1 kB / 472 MB, free: 15.73 MB / 350.1 MB
Notification: Performance of setup shared object (initialization): time 4.357e-05/0.2903, allocations: 323.3 kB / 472.3 MB, free: 15.42 MB / 350.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001173/0.2915, allocations: 0.6759 MB / 473 MB, free: 15.14 MB / 350.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001326/0.2928, allocations: 1.19 MB / 474.2 MB, free: 14.14 MB / 350.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0184/0.3112, allocations: 5 MB / 479.2 MB, free: 12.04 MB / 350.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.2e-05/0.3113, allocations: 6.203 kB / 479.2 MB, free: 12.04 MB / 350.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.003357/0.3146, allocations: 2.131 MB / 481.3 MB, free: 11.12 MB / 350.1 MB
Notification: Performance of prepare postOptimizeDAE: time 2.764e-05/0.3147, allocations: 16.28 kB / 481.3 MB, free: 11.12 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.363e-05/0.3147, allocations: 18.81 kB / 481.3 MB, free: 11.12 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 4.124e-05/0.3147, allocations: 31.59 kB / 481.4 MB, free: 11.12 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.002571/0.3173, allocations: 0.6451 MB / 482 MB, free: 11.06 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 4.262e-05/0.3174, allocations: 47.81 kB / 482.1 MB, free: 11.05 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001058/0.3184, allocations: 160.8 kB / 482.2 MB, free: 10.98 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001256/0.3186, allocations: 88.56 kB / 482.3 MB, free: 10.97 MB / 350.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0)))))) start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))))) start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))) start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 2340000000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16100000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16800000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 580000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0009914/0.3196, allocations: 0.6468 MB / 482.9 MB, free: 10.55 MB / 350.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.00022/0.3198, allocations: 99.11 kB / 483 MB, free: 10.5 MB / 350.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002556/0.3224, allocations: 1.45 MB / 484.5 MB, free: 9.852 MB / 350.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.74e-05/0.3224, allocations: 18.89 kB / 484.5 MB, free: 9.852 MB / 350.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 8.295e-06/0.3224, allocations: 1 kB / 484.5 MB, free: 9.852 MB / 350.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.094e-05/0.3224, allocations: 10.7 kB / 484.5 MB, free: 9.852 MB / 350.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.005976/0.3284, allocations: 3.602 MB / 488.1 MB, free: 8.184 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.121e-06/0.3284, allocations: 1.625 kB / 488.1 MB, free: 8.184 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002436/0.3309, allocations: 482.4 kB / 488.6 MB, free: 8.152 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 9.157e-06/0.3309, allocations: 6.875 kB / 488.6 MB, free: 8.152 MB / 350.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001141/0.331, allocations: 62.91 kB / 488.7 MB, free: 8.117 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.021e-05/0.331, allocations: 11.33 kB / 488.7 MB, free: 8.113 MB / 350.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.857e-06/0.331, allocations: 11.25 kB / 488.7 MB, free: 8.105 MB / 350.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003287/0.3343, allocations: 2.532 MB / 491.2 MB, free: 6.664 MB / 350.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 9.742e-05/0.3344, allocations: 153 kB / 491.4 MB, free: 6.496 MB / 350.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001476/0.3346, allocations: 48.97 kB / 491.4 MB, free: 6.449 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0009173/0.3355, allocations: 109.3 kB / 491.5 MB, free: 6.359 MB / 350.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001629/0.3357, allocations: 109.2 kB / 491.6 MB, free: 6.297 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.917e-05/0.3358, allocations: 53.52 kB / 491.7 MB, free: 6.254 MB / 350.1 MB
Notification: Performance of sorting global known variables: time 0.0002457/0.336, allocations: 296.9 kB / 492 MB, free: 6 MB / 350.1 MB
Notification: Performance of sort global known variables: time 1.5e-07/0.336, allocations: 0 / 492 MB, free: 6 MB / 350.1 MB
Notification: Performance of remove unused functions: time 0.001197/0.3372, allocations: 428 kB / 492.4 MB, free: 5.582 MB / 350.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001537/0.3374, allocations: 163 kB / 492.6 MB, free: 5.422 MB / 350.1 MB
Notification: Performance of simCode: created initialization part: time 0.002278/0.3397, allocations: 1.669 MB / 494.2 MB, free: 3.871 MB / 350.1 MB
Notification: Performance of simCode: created event and clocks part: time 2.324e-06/0.3397, allocations: 0 / 494.2 MB, free: 3.871 MB / 350.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.0009992/0.3407, allocations: 0.7611 MB / 495 MB, free: 3.109 MB / 350.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001212/0.3419, allocations: 214.7 kB / 495.2 MB, free: 2.91 MB / 350.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.007415/0.3493, allocations: 6.423 MB / 0.4899 GB, free: 12.43 MB / 366.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0009716/0.3503, allocations: 1.37 MB / 0.4912 GB, free: 11.03 MB / 366.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004596/0.3508, allocations: 123.4 kB / 0.4913 GB, free: 10.91 MB / 366.1 MB
Notification: Performance of SimCode: time 3.7e-07/0.3508, allocations: 0 / 0.4913 GB, free: 10.91 MB / 366.1 MB
Notification: Performance of Templates: time 0.02217/0.373, allocations: 18.6 MB / 0.5095 GB, free: 8.316 MB / 382.1 MB
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel  -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)