[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.09234/0.09234, allocations: 15.39 MB / 285.8 MB, free: 6.133 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0006051/0.0006052, allocations: 16 kB / 347.8 MB, free: 18.1 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1066/0.1073, allocations: 51.41 MB / 399.2 MB, free: 14.57 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit): time 0.002948/0.1103, allocations: 2.435 MB / 401.6 MB, free: 12.11 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.003819/0.1141, allocations: 2.683 MB / 404.3 MB, free: 9.422 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001461/0.1143, allocations: 7.938 kB / 404.3 MB, free: 9.414 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0001464/0.1144, allocations: 31.72 kB / 404.4 MB, free: 9.383 MB / 302.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.A.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.A.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.A.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.B.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.B.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.B.Utilities.UnitConversions.findUnit‘. Notification: Performance of NFTyping.typeBindings: time 0.0009068/0.1153, allocations: 318.6 kB / 404.7 MB, free: 9.07 MB / 302.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.A.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.A.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.B.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.B.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. Notification: Performance of NFTyping.typeClassSections: time 0.0008331/0.1162, allocations: 359.3 kB / 405 MB, free: 8.719 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0003577/0.1165, allocations: 326.5 kB / 405.3 MB, free: 8.398 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.000148/0.1167, allocations: 52.7 kB / 405.4 MB, free: 8.352 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0001137/0.1168, allocations: 87.58 kB / 405.5 MB, free: 8.266 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.000235/0.1171, allocations: 127.4 kB / 405.6 MB, free: 8.141 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 2.242e-05/0.1171, allocations: 4 kB / 405.6 MB, free: 8.137 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 2.971e-05/0.1171, allocations: 8 kB / 405.6 MB, free: 8.129 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 6.311e-05/0.1172, allocations: 47.81 kB / 405.7 MB, free: 8.082 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 5.984e-05/0.1173, allocations: 69.52 kB / 405.7 MB, free: 8.008 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0001702/0.1174, allocations: 155.9 kB / 405.9 MB, free: 7.855 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 5.55e-06/0.1175, allocations: 3.938 kB / 405.9 MB, free: 7.852 MB / 302.1 MB Notification: Performance of FrontEnd: time 1.412e-06/0.1175, allocations: 0 / 405.9 MB, free: 7.852 MB / 302.1 MB Notification: Performance of Transformations before backend: time 7.805e-06/0.1175, allocations: 4 kB / 405.9 MB, free: 7.848 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 31 * Number of variables: 31 Notification: Performance of Generate backend data structure: time 0.0007827/0.1183, allocations: 0.4982 MB / 406.4 MB, free: 7.301 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.963e-05/0.1183, allocations: 8.031 kB / 406.4 MB, free: 7.293 MB / 302.1 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 5.044e-05/0.1184, allocations: 46.56 kB / 406.4 MB, free: 7.238 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 5.569e-05/0.1184, allocations: 35.56 kB / 406.5 MB, free: 7.203 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003748/0.1188, allocations: 282.4 kB / 406.7 MB, free: 6.891 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.772e-05/0.1189, allocations: 12 kB / 406.8 MB, free: 6.879 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 3.756e-05/0.1189, allocations: 23.98 kB / 406.8 MB, free: 6.855 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0002433/0.1191, allocations: 133.6 kB / 406.9 MB, free: 6.719 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 1.191e-05/0.1192, allocations: 0 / 406.9 MB, free: 6.719 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.416e-05/0.1192, allocations: 4 kB / 406.9 MB, free: 6.715 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 8.887e-06/0.1192, allocations: 7.953 kB / 406.9 MB, free: 6.707 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0001556/0.1194, allocations: 95.88 kB / 407 MB, free: 6.613 MB / 302.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0009358/0.1203, allocations: 0.5508 MB / 407.6 MB, free: 6.012 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.0002058/0.1205, allocations: 130.6 kB / 407.7 MB, free: 5.875 MB / 302.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 8.444e-05/0.1206, allocations: 56.83 kB / 407.8 MB, free: 5.816 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 2.041e-05/0.1206, allocations: 7.938 kB / 407.8 MB, free: 5.809 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.13e-05/0.1207, allocations: 30.56 kB / 407.8 MB, free: 5.77 MB / 302.1 MB Notification: Performance of pre-optimization done (n=11): time 1.132e-06/0.1207, allocations: 0 / 407.8 MB, free: 5.77 MB / 302.1 MB Notification: Performance of matching and sorting (n=11): time 0.0003309/0.121, allocations: 169.3 kB / 408 MB, free: 5.598 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.038e-05/0.1211, allocations: 55.39 kB / 408 MB, free: 5.531 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002665/0.1213, allocations: 275 kB / 408.3 MB, free: 5.246 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 1.624e-05/0.1214, allocations: 29.7 kB / 408.3 MB, free: 5.211 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0001015/0.1215, allocations: 156.1 kB / 408.5 MB, free: 5.055 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 3.347e-05/0.1215, allocations: 35.45 kB / 408.5 MB, free: 5.02 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 8.937e-06/0.1215, allocations: 7.938 kB / 408.5 MB, free: 5.012 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001175/0.1216, allocations: 338.8 kB / 408.8 MB, free: 4.672 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 7.694e-05/0.1217, allocations: 36.36 kB / 408.9 MB, free: 4.637 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0001061/0.1218, allocations: 97.8 kB / 409 MB, free: 4.523 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 9.176e-05/0.1219, allocations: 55.98 kB / 409 MB, free: 4.469 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.126e-06/0.122, allocations: 4 kB / 409 MB, free: 4.465 MB / 302.1 MB Notification: Performance of matching and sorting (n=21) (initialization): time 0.000274/0.1222, allocations: 193.1 kB / 409.2 MB, free: 4.27 MB / 302.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.575e-05/0.1223, allocations: 8 kB / 409.2 MB, free: 4.262 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.36e-06/0.1223, allocations: 160 / 409.2 MB, free: 4.262 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 1.286e-05/0.1223, allocations: 11.94 kB / 409.2 MB, free: 4.25 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.000194/0.1225, allocations: 43.91 kB / 409.3 MB, free: 4.207 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 8.696e-06/0.1225, allocations: 3.953 kB / 409.3 MB, free: 4.203 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001265/0.1226, allocations: 19.84 kB / 409.3 MB, free: 4.184 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 1.209e-05/0.1227, allocations: 4 kB / 409.3 MB, free: 4.18 MB / 302.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 6 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (21): * Single equations (assignments): 21 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0001204/0.1228, allocations: 138.6 kB / 409.4 MB, free: 4.035 MB / 302.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 4.481e-05/0.1228, allocations: 27.7 kB / 409.5 MB, free: 4.008 MB / 302.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 5.376e-05/0.1229, allocations: 25.78 kB / 409.5 MB, free: 3.984 MB / 302.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 3.176e-06/0.1229, allocations: 8 kB / 409.5 MB, free: 3.977 MB / 302.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 6.722e-06/0.1229, allocations: 3.984 kB / 409.5 MB, free: 3.973 MB / 302.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 5.25e-06/0.1229, allocations: 3.953 kB / 409.5 MB, free: 3.969 MB / 302.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0003188/0.1233, allocations: 273.4 kB / 409.8 MB, free: 3.652 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.082e-06/0.1233, allocations: 0 / 409.8 MB, free: 3.652 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001306/0.1234, allocations: 19.98 kB / 409.8 MB, free: 3.633 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 5.65e-06/0.1234, allocations: 4 kB / 409.8 MB, free: 3.629 MB / 302.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.602e-05/0.1234, allocations: 0 / 409.8 MB, free: 3.629 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.473e-06/0.1234, allocations: 0 / 409.8 MB, free: 3.629 MB / 302.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.473e-06/0.1234, allocations: 0 / 409.8 MB, free: 3.629 MB / 302.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0003687/0.1238, allocations: 307 kB / 410.1 MB, free: 3.312 MB / 302.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0001033/0.1239, allocations: 108.8 kB / 410.2 MB, free: 3.188 MB / 302.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 3.164e-05/0.124, allocations: 3.984 kB / 410.2 MB, free: 3.184 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001145/0.1241, allocations: 4 kB / 410.2 MB, free: 3.18 MB / 302.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 2.6e-05/0.1241, allocations: 4 kB / 410.2 MB, free: 3.176 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.484e-06/0.1241, allocations: 4 kB / 410.2 MB, free: 3.172 MB / 302.1 MB Notification: Performance of sorting global known variables: time 0.0001798/0.1243, allocations: 193.9 kB / 410.4 MB, free: 2.988 MB / 302.1 MB Notification: Performance of sort global known variables: time 1.2e-07/0.1243, allocations: 4.062 kB / 410.4 MB, free: 2.984 MB / 302.1 MB Notification: Performance of remove unused functions: time 0.0002807/0.1246, allocations: 47.94 kB / 410.5 MB, free: 2.938 MB / 302.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 2 (A.state,B.state) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (11): * Single equations (assignments): 11 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0005723/0.1252, allocations: 0.8252 MB / 411.3 MB, free: 2.082 MB / 302.1 MB Notification: Performance of simCode: created initialization part: time 0.0002145/0.1254, allocations: 112.2 kB / 411.4 MB, free: 1.973 MB / 302.1 MB Notification: Performance of simCode: created event and clocks part: time 2.074e-06/0.1254, allocations: 4.062 kB / 411.4 MB, free: 1.969 MB / 302.1 MB Notification: Performance of simCode: created simulation system equations: time 6.937e-05/0.1255, allocations: 52.56 kB / 411.4 MB, free: 1.918 MB / 302.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004433/0.126, allocations: 61.02 kB / 411.5 MB, free: 1.855 MB / 302.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001833/0.1278, allocations: 1.352 MB / 412.9 MB, free: 444 kB / 302.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003498/0.1282, allocations: 0.7521 MB / 413.6 MB, free: 15.66 MB / 318.1 MB Notification: Performance of simCode: alias equations: time 0.0001355/0.1283, allocations: 46.2 kB / 413.7 MB, free: 15.61 MB / 318.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001076/0.1284, allocations: 71.41 kB / 413.7 MB, free: 15.54 MB / 318.1 MB Notification: Performance of SimCode: time 2.4e-07/0.1284, allocations: 0 / 413.7 MB, free: 15.54 MB / 318.1 MB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.01641/0.1448, allocations: 4.8 MB / 418.5 MB, free: 10.74 MB / 318.1 MB Notification: Performance of buildModelFMU: configured platform static using cached values: time 0.0002722/0.1452, allocations: 195.2 kB / 418.7 MB, free: 10.5 MB / 318.1 MB Notification: Performance of buildModelFMU: Generate platform static: time 1.842/1.988, allocations: 0 / 418.7 MB, free: 10.5 MB / 318.1 MB (rm -f Physiolibrary_Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.pipe ; mkfifo Physiolibrary_Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.pipe >> ../files/Physiolibrary_Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.sim & /home/hudson/saved_omc/OMSimulator/install/linux/bin/OMSimulator --tempDir=temp_Physiolibrary_Physiolibrary_SteadyStates_Examples_SimpleReaction_NormalInit_fmu --startTime=0 --stopTime=1e-08 --timeout=50 --tolerance=1e-06 Physiolibrary_Physiolibrary_SteadyStates_Examples_SimpleReaction_NormalInit.fmu > Physiolibrary_Physiolibrary.SteadyStates.Examples.SimpleReaction_NormalInit.pipe 2>&1) Environment - environmentSimulation: