[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07836/0.07836, allocations: 15.4 MB / 285.8 MB, free: 5.883 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.000537/0.0005371, allocations: 16 kB / 347.8 MB, free: 18.08 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.09571/0.09626, allocations: 51.4 MB / 399.2 MB, free: 14.56 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Chemical.Examples.SimpleReaction): time 0.002578/0.09888, allocations: 2.259 MB / 401.5 MB, free: 12.29 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.00381/0.1027, allocations: 2.648 MB / 404.1 MB, free: 9.629 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001434/0.1029, allocations: 7.938 kB / 404.1 MB, free: 9.621 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0001355/0.103, allocations: 27.72 kB / 404.1 MB, free: 9.594 MB / 302.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.A.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.A.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.A.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.B.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.B.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.B.Utilities.UnitConversions.findUnit‘. Notification: Performance of NFTyping.typeBindings: time 0.0008106/0.1038, allocations: 298.7 kB / 404.4 MB, free: 9.301 MB / 302.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.A.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.A.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.B.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.SimpleReaction.B.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. Notification: Performance of NFTyping.typeClassSections: time 0.0007829/0.1046, allocations: 355.2 kB / 404.8 MB, free: 8.953 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0002898/0.1049, allocations: 282.7 kB / 405 MB, free: 8.676 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0001133/0.105, allocations: 36.39 kB / 405.1 MB, free: 8.641 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 9.587e-05/0.1052, allocations: 87.58 kB / 405.2 MB, free: 8.555 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0001758/0.1053, allocations: 107.5 kB / 405.3 MB, free: 8.449 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 2.113e-05/0.1054, allocations: 8 kB / 405.3 MB, free: 8.441 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 3.061e-05/0.1054, allocations: 8 kB / 405.3 MB, free: 8.434 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 6.158e-05/0.1055, allocations: 39.77 kB / 405.3 MB, free: 8.395 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 6.003e-05/0.1055, allocations: 65.58 kB / 405.4 MB, free: 8.324 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0001716/0.1057, allocations: 135.9 kB / 405.5 MB, free: 8.191 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.968e-06/0.1057, allocations: 0 / 405.5 MB, free: 8.191 MB / 302.1 MB Notification: Performance of FrontEnd: time 1.353e-06/0.1057, allocations: 0 / 405.5 MB, free: 8.191 MB / 302.1 MB Notification: Performance of Transformations before backend: time 4.578e-06/0.1057, allocations: 0 / 405.5 MB, free: 8.191 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 25 * Number of variables: 25 Notification: Performance of Generate backend data structure: time 0.0007175/0.1065, allocations: 482.4 kB / 406 MB, free: 7.672 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.957e-05/0.1065, allocations: 12.03 kB / 406 MB, free: 7.66 MB / 302.1 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 4.499e-05/0.1066, allocations: 42.56 kB / 406.1 MB, free: 7.609 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 4.43e-05/0.1066, allocations: 23.67 kB / 406.1 MB, free: 7.586 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003279/0.1069, allocations: 273.5 kB / 406.3 MB, free: 7.281 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.476e-05/0.107, allocations: 12 kB / 406.4 MB, free: 7.27 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 3.024e-05/0.107, allocations: 12 kB / 406.4 MB, free: 7.258 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0002038/0.1072, allocations: 110.3 kB / 406.5 MB, free: 7.145 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 1.614e-05/0.1072, allocations: 4 kB / 406.5 MB, free: 7.141 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.384e-05/0.1073, allocations: 4 kB / 406.5 MB, free: 7.137 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 6.092e-06/0.1073, allocations: 4 kB / 406.5 MB, free: 7.133 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.000134/0.1074, allocations: 79.84 kB / 406.6 MB, free: 7.055 MB / 302.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0008329/0.1083, allocations: 0.5118 MB / 407.1 MB, free: 6.492 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.000189/0.1085, allocations: 122.5 kB / 407.2 MB, free: 6.363 MB / 302.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 6.93e-05/0.1085, allocations: 48.77 kB / 407.2 MB, free: 6.312 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 9.668e-06/0.1086, allocations: 4 kB / 407.2 MB, free: 6.309 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.281e-05/0.1086, allocations: 38.59 kB / 407.3 MB, free: 6.262 MB / 302.1 MB Notification: Performance of pre-optimization done (n=10): time 1.243e-06/0.1086, allocations: 0 / 407.3 MB, free: 6.262 MB / 302.1 MB Notification: Performance of matching and sorting (n=10): time 0.00029/0.1089, allocations: 157.4 kB / 407.4 MB, free: 6.102 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 3.278e-05/0.1089, allocations: 59.34 kB / 407.5 MB, free: 6.031 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002227/0.1092, allocations: 250.6 kB / 407.7 MB, free: 5.781 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 1.61e-05/0.1092, allocations: 29.7 kB / 407.8 MB, free: 5.746 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 8.958e-05/0.1093, allocations: 136.3 kB / 407.9 MB, free: 5.609 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 2.985e-05/0.1093, allocations: 43.38 kB / 407.9 MB, free: 5.566 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 8.226e-06/0.1093, allocations: 8 kB / 408 MB, free: 5.559 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001083/0.1094, allocations: 334.8 kB / 408.3 MB, free: 5.223 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 7.721e-05/0.1095, allocations: 39.97 kB / 408.3 MB, free: 5.184 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 9.549e-05/0.1096, allocations: 85.12 kB / 408.4 MB, free: 5.082 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 9.651e-05/0.1097, allocations: 59.97 kB / 408.5 MB, free: 5.023 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.306e-06/0.1097, allocations: 4 kB / 408.5 MB, free: 5.02 MB / 302.1 MB Notification: Performance of matching and sorting (n=20) (initialization): time 0.0002558/0.11, allocations: 177.2 kB / 408.6 MB, free: 4.84 MB / 302.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.553e-05/0.11, allocations: 7.938 kB / 408.6 MB, free: 4.832 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.781e-06/0.11, allocations: 4 kB / 408.6 MB, free: 4.828 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 1.668e-05/0.1101, allocations: 3.984 kB / 408.7 MB, free: 4.824 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0001622/0.1102, allocations: 31.98 kB / 408.7 MB, free: 4.793 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 8.416e-06/0.1102, allocations: 4 kB / 408.7 MB, free: 4.789 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001142/0.1104, allocations: 27.89 kB / 408.7 MB, free: 4.762 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 1.092e-05/0.1104, allocations: 8 kB / 408.7 MB, free: 4.754 MB / 302.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 6 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (20): * Single equations (assignments): 20 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0001079/0.1105, allocations: 137.7 kB / 408.9 MB, free: 4.609 MB / 302.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 4.554e-05/0.1105, allocations: 23.72 kB / 408.9 MB, free: 4.586 MB / 302.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 5.079e-05/0.1106, allocations: 25.7 kB / 408.9 MB, free: 4.562 MB / 302.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.744e-06/0.1106, allocations: 0 / 408.9 MB, free: 4.562 MB / 302.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.318e-06/0.1106, allocations: 0 / 408.9 MB, free: 4.562 MB / 302.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 3.798e-06/0.1106, allocations: 4 kB / 408.9 MB, free: 4.559 MB / 302.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0002584/0.1109, allocations: 253.5 kB / 409.2 MB, free: 4.262 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.092e-06/0.1109, allocations: 4 kB / 409.2 MB, free: 4.258 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001152/0.111, allocations: 24.3 kB / 409.2 MB, free: 4.234 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 2.053e-06/0.111, allocations: 0 / 409.2 MB, free: 4.234 MB / 302.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.404e-05/0.1111, allocations: 4 kB / 409.2 MB, free: 4.23 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.346e-06/0.1111, allocations: 4 kB / 409.2 MB, free: 4.227 MB / 302.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.433e-06/0.1111, allocations: 3.938 kB / 409.2 MB, free: 4.223 MB / 302.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0003104/0.1114, allocations: 275.1 kB / 409.5 MB, free: 3.938 MB / 302.1 MB Notification: Performance of postOpt removeConstants (simulation): time 9.289e-05/0.1115, allocations: 112.8 kB / 409.6 MB, free: 3.809 MB / 302.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 2.674e-05/0.1115, allocations: 7.938 kB / 409.6 MB, free: 3.801 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001101/0.1116, allocations: 8 kB / 409.6 MB, free: 3.793 MB / 302.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 2.2e-05/0.1117, allocations: 3.984 kB / 409.6 MB, free: 3.789 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 7.834e-06/0.1117, allocations: 8 kB / 409.6 MB, free: 3.781 MB / 302.1 MB Notification: Performance of sorting global known variables: time 0.0001552/0.1118, allocations: 178 kB / 409.8 MB, free: 3.605 MB / 302.1 MB Notification: Performance of sort global known variables: time 1.4e-07/0.1119, allocations: 4 kB / 409.8 MB, free: 3.602 MB / 302.1 MB Notification: Performance of remove unused functions: time 0.0002963/0.1122, allocations: 40 kB / 409.8 MB, free: 3.562 MB / 302.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 2 (A.state,B.state) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (10): * Single equations (assignments): 10 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0005141/0.1127, allocations: 0.8059 MB / 410.6 MB, free: 2.73 MB / 302.1 MB Notification: Performance of simCode: created initialization part: time 0.0001952/0.1129, allocations: 103.8 kB / 410.7 MB, free: 2.629 MB / 302.1 MB Notification: Performance of simCode: created event and clocks part: time 1.904e-06/0.1129, allocations: 0 / 410.7 MB, free: 2.629 MB / 302.1 MB Notification: Performance of simCode: created simulation system equations: time 6.886e-05/0.113, allocations: 51.91 kB / 410.8 MB, free: 2.578 MB / 302.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004283/0.1134, allocations: 53.16 kB / 410.8 MB, free: 2.527 MB / 302.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00162/0.115, allocations: 1.235 MB / 412.1 MB, free: 1.215 MB / 302.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003047/0.1154, allocations: 0.7479 MB / 412.8 MB, free: 452 kB / 302.1 MB Notification: Performance of simCode: alias equations: time 0.0001239/0.1155, allocations: 34.28 kB / 412.8 MB, free: 416 kB / 302.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 9.429e-05/0.1156, allocations: 63.41 kB / 412.9 MB, free: 352 kB / 302.1 MB Notification: Performance of SimCode: time 2.3e-07/0.1156, allocations: 0 / 412.9 MB, free: 352 kB / 302.1 MB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.01482/0.1304, allocations: 4.284 MB / 417.2 MB, free: 12.05 MB / 318.1 MB Notification: Performance of buildModelFMU: configured platform static using cached values: time 0.0001575/0.1306, allocations: 181.5 kB / 417.4 MB, free: 11.81 MB / 318.1 MB Notification: Performance of buildModelFMU: Generate platform static: time 1.776/1.907, allocations: 8 kB / 417.4 MB, free: 11.8 MB / 318.1 MB (rm -f Physiolibrary_Physiolibrary.Chemical.Examples.SimpleReaction.pipe ; mkfifo Physiolibrary_Physiolibrary.Chemical.Examples.SimpleReaction.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Chemical.Examples.SimpleReaction.pipe >> ../files/Physiolibrary_Physiolibrary.Chemical.Examples.SimpleReaction.sim & /home/hudson/saved_omc/OMSimulator/install/linux/bin/OMSimulator --tempDir=temp_Physiolibrary_Physiolibrary_Chemical_Examples_SimpleReaction_fmu --startTime=0 --stopTime=1e-07 --timeout=50 --tolerance=1e-06 Physiolibrary_Physiolibrary_Chemical_Examples_SimpleReaction.fmu > Physiolibrary_Physiolibrary.Chemical.Examples.SimpleReaction.pipe 2>&1) Environment - environmentSimulation: