[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.08491/0.08491, allocations: 15.41 MB / 285.8 MB, free: 5.766 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005607/0.0005609, allocations: 23.97 kB / 347.8 MB, free: 18.07 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1005/0.1011, allocations: 51.41 MB / 399.2 MB, free: 14.55 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Chemical.Examples.MichaelisMenten): time 0.003854/0.105, allocations: 2.871 MB / 402.1 MB, free: 11.66 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.005166/0.1102, allocations: 2.8 MB / 404.9 MB, free: 8.852 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0004992/0.1108, allocations: 15.88 kB / 404.9 MB, free: 8.836 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0003212/0.1111, allocations: 47.56 kB / 404.9 MB, free: 8.789 MB / 302.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.UnitConversions.findUnit‘. Notification: Performance of NFTyping.typeBindings: time 0.001715/0.1128, allocations: 362.3 kB / 405.3 MB, free: 8.434 MB / 302.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. Notification: Performance of NFTyping.typeClassSections: time 0.001371/0.1142, allocations: 379.2 kB / 405.6 MB, free: 8.062 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0008354/0.1151, allocations: 0.4899 MB / 406.1 MB, free: 7.57 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0002829/0.1154, allocations: 69.39 kB / 406.2 MB, free: 7.492 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.000359/0.1157, allocations: 147.3 kB / 406.4 MB, free: 7.348 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0004633/0.1162, allocations: 199.1 kB / 406.5 MB, free: 7.152 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 7.356e-05/0.1163, allocations: 12 kB / 406.6 MB, free: 7.141 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0001016/0.1164, allocations: 12 kB / 406.6 MB, free: 7.129 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0001247/0.1165, allocations: 83.7 kB / 406.6 MB, free: 7.047 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 0.000162/0.1167, allocations: 89.45 kB / 406.7 MB, free: 6.953 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0003594/0.1171, allocations: 263.6 kB / 407 MB, free: 6.695 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 6.472e-06/0.1171, allocations: 0 / 407 MB, free: 6.695 MB / 302.1 MB Notification: Performance of FrontEnd: time 2.014e-06/0.1171, allocations: 4 kB / 407 MB, free: 6.691 MB / 302.1 MB Notification: Performance of Transformations before backend: time 1.385e-05/0.1171, allocations: 0 / 407 MB, free: 6.691 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 48 * Number of variables: 48 Notification: Performance of Generate backend data structure: time 0.001428/0.1185, allocations: 0.6268 MB / 407.6 MB, free: 6.016 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.361e-05/0.1186, allocations: 12.02 kB / 407.6 MB, free: 6.004 MB / 302.1 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 8.931e-05/0.1187, allocations: 62.5 kB / 407.7 MB, free: 5.934 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 9.248e-05/0.1188, allocations: 39.53 kB / 407.7 MB, free: 5.895 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0006065/0.1194, allocations: 361 kB / 408.1 MB, free: 5.5 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.924e-05/0.1194, allocations: 16.44 kB / 408.1 MB, free: 5.484 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 4.593e-05/0.1195, allocations: 24 kB / 408.1 MB, free: 5.461 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0004072/0.1199, allocations: 237.8 kB / 408.4 MB, free: 5.219 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 1.226e-05/0.1199, allocations: 3.938 kB / 408.4 MB, free: 5.215 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.153e-05/0.1199, allocations: 4 kB / 408.4 MB, free: 5.211 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.31e-05/0.12, allocations: 23.88 kB / 408.4 MB, free: 5.188 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0002965/0.1203, allocations: 161.6 kB / 408.5 MB, free: 5.031 MB / 302.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001693/0.122, allocations: 0.8347 MB / 409.4 MB, free: 4.137 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.0004645/0.1225, allocations: 225.2 kB / 409.6 MB, free: 3.898 MB / 302.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.000156/0.1226, allocations: 117.6 kB / 409.7 MB, free: 3.777 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 1.838e-05/0.1226, allocations: 0 / 409.7 MB, free: 3.777 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.888e-05/0.1227, allocations: 38.56 kB / 409.8 MB, free: 3.73 MB / 302.1 MB Notification: Performance of pre-optimization done (n=17): time 1.072e-06/0.1227, allocations: 0 / 409.8 MB, free: 3.73 MB / 302.1 MB Notification: Performance of matching and sorting (n=24): time 0.00498/0.1277, allocations: 1.352 MB / 411.1 MB, free: 2.344 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 5.079e-05/0.1277, allocations: 85.14 kB / 411.2 MB, free: 2.242 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004598/0.1282, allocations: 402 kB / 411.6 MB, free: 1.844 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 2.838e-05/0.1282, allocations: 33.7 kB / 411.6 MB, free: 1.805 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0001512/0.1284, allocations: 204.1 kB / 411.8 MB, free: 1.602 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 7.368e-05/0.1285, allocations: 82.77 kB / 411.9 MB, free: 1.52 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 1.856e-05/0.1285, allocations: 4 kB / 411.9 MB, free: 1.516 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001547/0.1287, allocations: 354.8 kB / 412.2 MB, free: 1.16 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002077/0.1289, allocations: 127.9 kB / 412.4 MB, free: 1.035 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002697/0.1292, allocations: 217.1 kB / 412.6 MB, free: 0.7891 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.0002641/0.1294, allocations: 165 kB / 412.7 MB, free: 0.6289 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 2.885e-06/0.1295, allocations: 0 / 412.7 MB, free: 0.6289 MB / 302.1 MB Notification: Performance of matching and sorting (n=37) (initialization): time 0.00235/0.1318, allocations: 0.7427 MB / 413.5 MB, free: 15.88 MB / 318.1 MB Notification: Performance of prepare postOptimizeDAE: time 2.148e-05/0.1318, allocations: 8 kB / 413.5 MB, free: 15.87 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 7.634e-06/0.1319, allocations: 0 / 413.5 MB, free: 15.87 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.002422/0.1343, allocations: 425.1 kB / 413.9 MB, free: 15.45 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0001624/0.1345, allocations: 47.92 kB / 414 MB, free: 15.4 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.005964/0.1404, allocations: 4.568 MB / 418.5 MB, free: 10.55 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0002848/0.1407, allocations: 15.98 kB / 418.5 MB, free: 10.54 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 2.698e-05/0.1408, allocations: 12 kB / 418.6 MB, free: 10.53 MB / 318.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 11 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (25): * Single equations (assignments): 23 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 1 {(1,100.0%) 6} * Non-linear torn systems: 1 {1 6} Notification: Performance of prepare postOptimizeDAE: time 0.0002163/0.141, allocations: 157.8 kB / 418.7 MB, free: 10.36 MB / 318.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 7.946e-05/0.1411, allocations: 43.47 kB / 418.8 MB, free: 10.32 MB / 318.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.000143/0.1412, allocations: 67.75 kB / 418.8 MB, free: 10.25 MB / 318.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 3.116e-06/0.1413, allocations: 0 / 418.8 MB, free: 10.25 MB / 318.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 7.143e-06/0.1413, allocations: 7.938 kB / 418.8 MB, free: 10.25 MB / 318.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 3.706e-06/0.1413, allocations: 0 / 418.8 MB, free: 10.25 MB / 318.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003071/0.1444, allocations: 1.183 MB / 420 MB, free: 9 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.797e-06/0.1444, allocations: 0 / 420 MB, free: 9 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 9.826e-05/0.1445, allocations: 23.92 kB / 420 MB, free: 8.977 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.002308/0.1468, allocations: 421.1 kB / 420.4 MB, free: 8.559 MB / 318.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 2.715e-05/0.1468, allocations: 7.984 kB / 420.4 MB, free: 8.551 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.00523/0.1521, allocations: 4.338 MB / 424.8 MB, free: 3.926 MB / 318.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.486e-06/0.1521, allocations: 4.031 kB / 424.8 MB, free: 3.922 MB / 318.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002459/0.1546, allocations: 0.9381 MB / 425.7 MB, free: 2.957 MB / 318.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0001834/0.1547, allocations: 144.6 kB / 425.9 MB, free: 2.797 MB / 318.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 6.061e-05/0.1548, allocations: 8.047 kB / 425.9 MB, free: 2.789 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002232/0.1551, allocations: 16 kB / 425.9 MB, free: 2.773 MB / 318.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 6.693e-05/0.1551, allocations: 19.97 kB / 425.9 MB, free: 2.754 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.58e-05/0.1551, allocations: 4 kB / 425.9 MB, free: 2.75 MB / 318.1 MB Notification: Performance of sorting global known variables: time 0.0003264/0.1555, allocations: 287.1 kB / 426.2 MB, free: 2.469 MB / 318.1 MB Notification: Performance of sort global known variables: time 1.4e-07/0.1555, allocations: 0 / 426.2 MB, free: 2.469 MB / 318.1 MB Notification: Performance of remove unused functions: time 0.0006609/0.1562, allocations: 140 kB / 426.3 MB, free: 2.332 MB / 318.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 2 * Number of states: 1 (state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (13): * Single equations (assignments): 11 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 1 {(1,100.0%) 5} * Non-linear torn systems: 1 {1 6} Notification: Performance of Backend phase and start with SimCode phase: time 0.002752/0.1589, allocations: 1.499 MB / 427.8 MB, free: 0.7969 MB / 318.1 MB Notification: Performance of simCode: created initialization part: time 0.001218/0.1601, allocations: 0.5946 MB / 428.4 MB, free: 180 kB / 318.1 MB Notification: Performance of simCode: created event and clocks part: time 3.106e-06/0.1602, allocations: 0 / 428.4 MB, free: 180 kB / 318.1 MB Notification: Performance of simCode: created simulation system equations: time 0.1785/0.3387, allocations: 433.2 kB / 428.9 MB, free: 35.15 MB / 318.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007946/0.3395, allocations: 89.53 kB / 428.9 MB, free: 35.15 MB / 318.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.005649/0.3452, allocations: 2.802 MB / 431.7 MB, free: 34.35 MB / 318.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003538/0.3456, allocations: 0.825 MB / 432.6 MB, free: 33.65 MB / 318.1 MB Notification: Performance of simCode: alias equations: time 0.0003023/0.3459, allocations: 60.53 kB / 432.6 MB, free: 33.64 MB / 318.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0002757/0.3462, allocations: 116.4 kB / 432.7 MB, free: 33.64 MB / 318.1 MB Notification: Performance of SimCode: time 1.122e-06/0.3462, allocations: 0 / 432.7 MB, free: 33.64 MB / 318.1 MB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.02916/0.3754, allocations: 12.88 MB / 445.6 MB, free: 29.3 MB / 318.1 MB Notification: Performance of buildModelFMU: configured platform static using cached values: time 0.0001218/0.3755, allocations: 208.3 kB / 445.8 MB, free: 29.07 MB / 318.1 MB Notification: Performance of buildModelFMU: Generate platform static: time 2.2/2.575, allocations: 0 / 445.8 MB, free: 29.07 MB / 318.1 MB (rm -f Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.pipe ; mkfifo Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.pipe >> ../files/Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.sim & /home/hudson/saved_omc/OMSimulator/install/linux/bin/OMSimulator --tempDir=temp_Physiolibrary_Physiolibrary_Chemical_Examples_MichaelisMenten_fmu --startTime=0 --stopTime=1 --timeout=50 --tolerance=1e-06 Physiolibrary_Physiolibrary_Chemical_Examples_MichaelisMenten.fmu > Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.pipe 2>&1) Environment - environmentSimulation: