Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo", uses=false) Using package Physiolibrary with version 2.3.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo) Using package Modelica with version 3.2.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow") translateModel(Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0008275/0.0008275, allocations: 102.9 kB / 15.71 MB, free: 460 kB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.000988/0.000988, allocations: 172 kB / 16.58 MB, free: 6.402 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo): time 1.661/1.661, allocations: 205.4 MB / 222.8 MB, free: 5.836 MB / 174.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1238:16-1238:88:writable] Warning: The file was not encoded in UTF-8: "

[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "

Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.1024/0.1024, allocations: 15.4 MB / 286.4 MB, free: 6.113 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0006632/0.0006635, allocations: 20 kB / 348.3 MB, free: 18.19 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1236/0.1242, allocations: 51.41 MB / 399.7 MB, free: 14.66 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow): time 0.002155/0.1264, allocations: 1.631 MB / 401.4 MB, free: 13.02 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.000168/0.1266, allocations: 75.7 kB / 401.4 MB, free: 12.95 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 7.048e-05/0.1267, allocations: 4 kB / 401.4 MB, free: 12.95 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0001059/0.1268, allocations: 11.92 kB / 401.5 MB, free: 12.93 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 5.899e-05/0.1269, allocations: 15.86 kB / 401.5 MB, free: 12.92 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 9.236e-05/0.127, allocations: 23.91 kB / 401.5 MB, free: 12.89 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0001288/0.1271, allocations: 71.61 kB / 401.6 MB, free: 12.82 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0001262/0.1273, allocations: 20.16 kB / 401.6 MB, free: 12.8 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 3.506e-05/0.1273, allocations: 15.94 kB / 401.6 MB, free: 12.79 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 7.29e-05/0.1274, allocations: 27.86 kB / 401.6 MB, free: 12.76 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 2.016e-05/0.1274, allocations: 0 / 401.6 MB, free: 12.76 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 1.051e-05/0.1274, allocations: 8 kB / 401.6 MB, free: 12.75 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 1.409e-05/0.1275, allocations: 4 kB / 401.6 MB, free: 12.75 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 3.174e-05/0.1275, allocations: 37.64 kB / 401.7 MB, free: 12.7 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 8.804e-05/0.1276, allocations: 56.12 kB / 401.7 MB, free: 12.65 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 6.192e-06/0.1276, allocations: 0 / 401.7 MB, free: 12.65 MB / 302.1 MB Notification: Performance of FrontEnd: time 2.254e-06/0.1276, allocations: 0 / 401.7 MB, free: 12.65 MB / 302.1 MB Notification: Performance of Transformations before backend: time 4.408e-06/0.1276, allocations: 0 / 401.7 MB, free: 12.65 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 11 * Number of variables: 11 Notification: Performance of Generate backend data structure: time 0.0004248/0.128, allocations: 351.2 kB / 402.1 MB, free: 12.26 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.107e-05/0.1281, allocations: 12.03 kB / 402.1 MB, free: 12.25 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 3.564e-05/0.1281, allocations: 11.91 kB / 402.1 MB, free: 12.23 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0001972/0.1283, allocations: 186.9 kB / 402.3 MB, free: 12.01 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.465e-05/0.1284, allocations: 3.953 kB / 402.3 MB, free: 12.01 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 1.146e-05/0.1284, allocations: 4 kB / 402.3 MB, free: 12 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0001439/0.1285, allocations: 61.62 kB / 402.3 MB, free: 11.94 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 9.197e-06/0.1286, allocations: 0 / 402.3 MB, free: 11.94 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.3e-05/0.1286, allocations: 4 kB / 402.3 MB, free: 11.93 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 7.123e-06/0.1286, allocations: 0 / 402.3 MB, free: 11.93 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 5.315e-05/0.1286, allocations: 19.98 kB / 402.4 MB, free: 11.91 MB / 302.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0005037/0.1292, allocations: 483.1 kB / 402.8 MB, free: 11.39 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.0001072/0.1293, allocations: 169.1 kB / 403 MB, free: 11.21 MB / 302.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 3.595e-05/0.1293, allocations: 80.14 kB / 403.1 MB, free: 11.13 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 3.048e-05/0.1294, allocations: 79.28 kB / 403.2 MB, free: 11.05 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 5.491e-05/0.1294, allocations: 105.8 kB / 403.3 MB, free: 10.94 MB / 302.1 MB Notification: Performance of pre-optimization done (n=0): time 3.146e-06/0.1294, allocations: 7.984 kB / 403.3 MB, free: 10.93 MB / 302.1 MB Notification: Performance of matching and sorting (n=0): time 7.388e-05/0.1295, allocations: 37.56 kB / 403.3 MB, free: 10.89 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 6.909e-05/0.1296, allocations: 138.6 kB / 403.4 MB, free: 10.74 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0001258/0.1297, allocations: 138.1 kB / 403.6 MB, free: 10.59 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 1.374e-05/0.1297, allocations: 29.7 kB / 403.6 MB, free: 10.56 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 6.48e-05/0.1298, allocations: 96.05 kB / 403.7 MB, free: 10.46 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 3.206e-06/0.1298, allocations: 4 kB / 403.7 MB, free: 10.46 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 2.675e-06/0.1298, allocations: 0 / 403.7 MB, free: 10.46 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001205/0.1299, allocations: 318.8 kB / 404 MB, free: 10.14 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 9.027e-06/0.13, allocations: 0 / 404 MB, free: 10.14 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 1.028e-05/0.13, allocations: 8 kB / 404 MB, free: 10.13 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 2.155e-05/0.13, allocations: 112 / 404 MB, free: 10.13 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.453e-06/0.13, allocations: 3.938 kB / 404 MB, free: 10.12 MB / 302.1 MB Notification: Performance of matching and sorting (n=1) (initialization): time 0.0001/0.1301, allocations: 49.66 kB / 404.1 MB, free: 10.07 MB / 302.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.321e-05/0.1301, allocations: 4 kB / 404.1 MB, free: 10.07 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 5.681e-06/0.1302, allocations: 3.953 kB / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 1.004e-05/0.1302, allocations: 0 / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 5.403e-05/0.1302, allocations: 4 kB / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 9.137e-06/0.1302, allocations: 7.938 kB / 404.1 MB, free: 10.05 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 2.852e-05/0.1303, allocations: 3.938 kB / 404.1 MB, free: 10.05 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.649e-06/0.1303, allocations: 0 / 404.1 MB, free: 10.05 MB / 302.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 1 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1): * Single equations (assignments): 1 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0001004/0.1304, allocations: 194 kB / 404.3 MB, free: 9.848 MB / 302.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 6.394e-05/0.1305, allocations: 108.9 kB / 404.4 MB, free: 9.734 MB / 302.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 4.81e-05/0.1305, allocations: 116.6 kB / 404.5 MB, free: 9.613 MB / 302.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.191e-05/0.1306, allocations: 188.2 kB / 404.7 MB, free: 9.422 MB / 302.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 6.732e-05/0.1307, allocations: 176.3 kB / 404.9 MB, free: 9.242 MB / 302.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 6.767e-05/0.1307, allocations: 180.2 kB / 405 MB, free: 9.059 MB / 302.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0002559/0.131, allocations: 425.2 kB / 405.5 MB, free: 8.586 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.254e-05/0.131, allocations: 109 kB / 405.6 MB, free: 8.473 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 4.314e-05/0.1311, allocations: 112.9 kB / 405.7 MB, free: 8.355 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 6.196e-05/0.1312, allocations: 176.3 kB / 405.8 MB, free: 8.176 MB / 302.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 6.373e-05/0.1312, allocations: 180.2 kB / 406 MB, free: 7.992 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 6.315e-05/0.1313, allocations: 180.3 kB / 406.2 MB, free: 7.809 MB / 302.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.231e-05/0.1314, allocations: 192.1 kB / 406.4 MB, free: 7.613 MB / 302.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0001525/0.1315, allocations: 307.7 kB / 406.7 MB, free: 7.289 MB / 302.1 MB Notification: Performance of postOpt removeConstants (simulation): time 9.093e-05/0.1316, allocations: 186 kB / 406.9 MB, free: 7.082 MB / 302.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 8.383e-05/0.1317, allocations: 176.3 kB / 407 MB, free: 6.902 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 8.233e-05/0.1318, allocations: 116.9 kB / 407.2 MB, free: 6.781 MB / 302.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 7.232e-05/0.1319, allocations: 180.2 kB / 407.3 MB, free: 6.598 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.441e-05/0.1319, allocations: 101 kB / 407.4 MB, free: 6.492 MB / 302.1 MB Notification: Performance of sorting global known variables: time 8.676e-05/0.132, allocations: 119.9 kB / 407.5 MB, free: 6.375 MB / 302.1 MB Notification: Performance of sort global known variables: time 1.3e-07/0.132, allocations: 0 / 407.5 MB, free: 6.375 MB / 302.1 MB Notification: Performance of remove unused functions: time 0.0002263/0.1323, allocations: 8 kB / 407.6 MB, free: 6.367 MB / 302.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (0): * Single equations (assignments): 0 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001224/0.1324, allocations: 170.5 kB / 407.7 MB, free: 6.191 MB / 302.1 MB Notification: Performance of simCode: created initialization part: time 7.309e-05/0.1325, allocations: 4 kB / 407.7 MB, free: 6.188 MB / 302.1 MB Notification: Performance of simCode: created event and clocks part: time 2.144e-06/0.1325, allocations: 0 / 407.7 MB, free: 6.188 MB / 302.1 MB Notification: Performance of simCode: created simulation system equations: time 1.443e-06/0.1325, allocations: 0 / 407.7 MB, free: 6.188 MB / 302.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0006384/0.1331, allocations: 0.5498 MB / 408.3 MB, free: 5.633 MB / 302.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.0004108/0.1335, allocations: 275.6 kB / 408.5 MB, free: 5.324 MB / 302.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0002482/0.1338, allocations: 0.6809 MB / 409.2 MB, free: 4.617 MB / 302.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 2.514e-05/0.1338, allocations: 15.44 kB / 409.2 MB, free: 4.602 MB / 302.1 MB Notification: Performance of SimCode: time 2.3e-07/0.1338, allocations: 0 / 409.2 MB, free: 4.602 MB / 302.1 MB Notification: Performance of Templates: time 0.002301/0.1362, allocations: 0.9568 MB / 410.2 MB, free: 3.645 MB / 302.1 MB make -j1 -f Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow.makefile make -j1 -f Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlow.makefile clang++ NOTFOUND -Winvalid-pch -O0 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/c/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlowCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlowCalcHelperMain.cpp clang: error: no such file or directory: 'NOTFOUND' make: *** [: OMCppPhysiolibrary_Physiolibrary.Thermal.Examples.SkinHeatTransferOnBloodFlowCalcHelperMain.o] Error 1