Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlow.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo", uses=false) Using package Physiolibrary with version 2.3.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo) Using package Modelica with version 3.2.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.Thermal.Examples.SkinHeatFlow,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlow") translateModel(Physiolibrary.Thermal.Examples.SkinHeatFlow,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlow") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001028/0.001028, allocations: 99.44 kB / 15.71 MB, free: 452 kB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001173/0.001174, allocations: 179.9 kB / 16.58 MB, free: 6.422 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo): time 1.681/1.681, allocations: 205.4 MB / 222.7 MB, free: 5.641 MB / 174.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1238:16-1238:88:writable] Warning: The file was not encoded in UTF-8: "

[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "

Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.09778/0.09778, allocations: 15.39 MB / 286.4 MB, free: 5.895 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005528/0.0005528, allocations: 12 kB / 348.3 MB, free: 18.21 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1124/0.113, allocations: 51.42 MB / 399.7 MB, free: 14.67 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Thermal.Examples.SkinHeatFlow): time 0.002354/0.1154, allocations: 1.634 MB / 401.4 MB, free: 13.03 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.0001427/0.1156, allocations: 63.78 kB / 401.4 MB, free: 12.96 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 6.25e-05/0.1156, allocations: 4 kB / 401.4 MB, free: 12.96 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 9.737e-05/0.1158, allocations: 19.86 kB / 401.4 MB, free: 12.94 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 5.064e-05/0.1158, allocations: 23.83 kB / 401.5 MB, free: 12.92 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 6.005e-05/0.1159, allocations: 11.98 kB / 401.5 MB, free: 12.91 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0001259/0.116, allocations: 79.53 kB / 401.6 MB, free: 12.83 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 9.251e-05/0.1161, allocations: 12.19 kB / 401.6 MB, free: 12.81 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 3.126e-05/0.1161, allocations: 19.92 kB / 401.6 MB, free: 12.79 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 5.365e-05/0.1162, allocations: 19.94 kB / 401.6 MB, free: 12.77 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 1.931e-05/0.1162, allocations: 4 kB / 401.6 MB, free: 12.77 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 1.041e-05/0.1162, allocations: 7.938 kB / 401.6 MB, free: 12.76 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 1.395e-05/0.1163, allocations: 7.984 kB / 401.6 MB, free: 12.75 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 3.611e-05/0.1163, allocations: 41.64 kB / 401.7 MB, free: 12.71 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 6.887e-05/0.1164, allocations: 48.08 kB / 401.7 MB, free: 12.66 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.787e-06/0.1164, allocations: 0 / 401.7 MB, free: 12.66 MB / 302.1 MB Notification: Performance of FrontEnd: time 1.603e-06/0.1164, allocations: 0 / 401.7 MB, free: 12.66 MB / 302.1 MB Notification: Performance of Transformations before backend: time 3.035e-06/0.1164, allocations: 0 / 401.7 MB, free: 12.66 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 11 * Number of variables: 11 Notification: Performance of Generate backend data structure: time 0.0003274/0.1167, allocations: 355.2 kB / 402.1 MB, free: 12.27 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.192e-05/0.1168, allocations: 12.03 kB / 402.1 MB, free: 12.25 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 2.79e-05/0.1168, allocations: 7.906 kB / 402.1 MB, free: 12.25 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0001607/0.117, allocations: 183 kB / 402.3 MB, free: 12.03 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.391e-05/0.117, allocations: 19.88 kB / 402.3 MB, free: 12.01 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 1.119e-05/0.117, allocations: 4 kB / 402.3 MB, free: 12 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0001092/0.1171, allocations: 57.62 kB / 402.3 MB, free: 11.94 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 6.221e-06/0.1172, allocations: 0 / 402.3 MB, free: 11.94 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 1.004e-05/0.1172, allocations: 4 kB / 402.3 MB, free: 11.94 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 5.921e-06/0.1172, allocations: 3.984 kB / 402.3 MB, free: 11.93 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 4.92e-05/0.1172, allocations: 20 kB / 402.4 MB, free: 11.91 MB / 302.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0004571/0.1177, allocations: 483 kB / 402.8 MB, free: 11.39 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 8.558e-05/0.1178, allocations: 169.1 kB / 403 MB, free: 11.21 MB / 302.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 3.627e-05/0.1178, allocations: 88.14 kB / 403.1 MB, free: 11.12 MB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 2.977e-05/0.1179, allocations: 83.2 kB / 403.2 MB, free: 11.04 MB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.497e-05/0.1179, allocations: 105.8 kB / 403.3 MB, free: 10.93 MB / 302.1 MB Notification: Performance of pre-optimization done (n=0): time 9.02e-07/0.1179, allocations: 0 / 403.3 MB, free: 10.93 MB / 302.1 MB Notification: Performance of matching and sorting (n=0): time 6.494e-05/0.118, allocations: 41.56 kB / 403.3 MB, free: 10.88 MB / 302.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 5.999e-05/0.1181, allocations: 126.7 kB / 403.4 MB, free: 10.75 MB / 302.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0001209/0.1182, allocations: 146.2 kB / 403.6 MB, free: 10.59 MB / 302.1 MB Notification: Performance of collectPreVariables (initialization): time 1.185e-05/0.1182, allocations: 25.7 kB / 403.6 MB, free: 10.56 MB / 302.1 MB Notification: Performance of collectInitialEqns (initialization): time 6.378e-05/0.1183, allocations: 100 kB / 403.7 MB, free: 10.46 MB / 302.1 MB Notification: Performance of collectInitialBindings (initialization): time 1.833e-06/0.1183, allocations: 0 / 403.7 MB, free: 10.46 MB / 302.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 2.004e-06/0.1183, allocations: 0 / 403.7 MB, free: 10.46 MB / 302.1 MB Notification: Performance of setup shared object (initialization): time 0.0001158/0.1184, allocations: 318.8 kB / 404 MB, free: 10.14 MB / 302.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 9.198e-06/0.1184, allocations: 3.984 kB / 404 MB, free: 10.13 MB / 302.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 7.454e-06/0.1185, allocations: 3.938 kB / 404 MB, free: 10.13 MB / 302.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 1.891e-05/0.1185, allocations: 4 kB / 404 MB, free: 10.12 MB / 302.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.31e-07/0.1185, allocations: 4.062 kB / 404 MB, free: 10.12 MB / 302.1 MB Notification: Performance of matching and sorting (n=1) (initialization): time 8.583e-05/0.1186, allocations: 41.61 kB / 404.1 MB, free: 10.07 MB / 302.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.197e-05/0.1186, allocations: 4 kB / 404.1 MB, free: 10.07 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.663e-06/0.1186, allocations: 11.94 kB / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 8.355e-06/0.1186, allocations: 0 / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 3.738e-05/0.1187, allocations: 0 / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 4.538e-06/0.1187, allocations: 0 / 404.1 MB, free: 10.06 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 2.719e-05/0.1187, allocations: 3.938 kB / 404.1 MB, free: 10.05 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.668e-06/0.1187, allocations: 4 kB / 404.1 MB, free: 10.05 MB / 302.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 1 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1): * Single equations (assignments): 1 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.000104/0.1188, allocations: 197.1 kB / 404.3 MB, free: 9.848 MB / 302.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 6.297e-05/0.1189, allocations: 112.8 kB / 404.4 MB, free: 9.73 MB / 302.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 5.268e-05/0.119, allocations: 112.6 kB / 404.5 MB, free: 9.613 MB / 302.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001/0.1191, allocations: 180.2 kB / 404.7 MB, free: 9.43 MB / 302.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0001368/0.1192, allocations: 192.2 kB / 404.9 MB, free: 9.234 MB / 302.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0001381/0.1194, allocations: 180.3 kB / 405 MB, free: 9.051 MB / 302.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0003205/0.1197, allocations: 421.1 kB / 405.5 MB, free: 8.582 MB / 302.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.843e-05/0.1197, allocations: 105 kB / 405.6 MB, free: 8.473 MB / 302.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 4.289e-05/0.1198, allocations: 108.9 kB / 405.7 MB, free: 8.359 MB / 302.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 5.977e-05/0.1199, allocations: 184.2 kB / 405.8 MB, free: 8.172 MB / 302.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 7.073e-05/0.1199, allocations: 176.4 kB / 406 MB, free: 7.992 MB / 302.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 7.015e-05/0.12, allocations: 192.1 kB / 406.2 MB, free: 7.797 MB / 302.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.761e-05/0.1201, allocations: 184.2 kB / 406.4 MB, free: 7.609 MB / 302.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0001325/0.1202, allocations: 307.7 kB / 406.7 MB, free: 7.285 MB / 302.1 MB Notification: Performance of postOpt removeConstants (simulation): time 7.782e-05/0.1203, allocations: 186.1 kB / 406.9 MB, free: 7.078 MB / 302.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 7.56e-05/0.1204, allocations: 184.2 kB / 407 MB, free: 6.891 MB / 302.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 8.621e-05/0.1205, allocations: 101 kB / 407.1 MB, free: 6.785 MB / 302.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 6.736e-05/0.1205, allocations: 192.1 kB / 407.3 MB, free: 6.59 MB / 302.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.516e-05/0.1206, allocations: 101 kB / 407.4 MB, free: 6.484 MB / 302.1 MB Notification: Performance of sorting global known variables: time 7.313e-05/0.1207, allocations: 111.9 kB / 407.5 MB, free: 6.375 MB / 302.1 MB Notification: Performance of sort global known variables: time 1.2e-07/0.1207, allocations: 0 / 407.5 MB, free: 6.375 MB / 302.1 MB Notification: Performance of remove unused functions: time 0.0002104/0.1209, allocations: 8 kB / 407.5 MB, free: 6.367 MB / 302.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (0): * Single equations (assignments): 0 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 9.712e-05/0.121, allocations: 170.5 kB / 407.7 MB, free: 6.191 MB / 302.1 MB Notification: Performance of simCode: created initialization part: time 5.806e-05/0.1211, allocations: 7.984 kB / 407.7 MB, free: 6.184 MB / 302.1 MB Notification: Performance of simCode: created event and clocks part: time 1.623e-06/0.1211, allocations: 0 / 407.7 MB, free: 6.184 MB / 302.1 MB Notification: Performance of simCode: created simulation system equations: time 2.976e-06/0.1211, allocations: 3.938 kB / 407.7 MB, free: 6.18 MB / 302.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0005521/0.1216, allocations: 0.5459 MB / 408.3 MB, free: 5.629 MB / 302.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.0003861/0.122, allocations: 267.7 kB / 408.5 MB, free: 5.328 MB / 302.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003467/0.1224, allocations: 0.6926 MB / 409.2 MB, free: 4.609 MB / 302.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 2.389e-05/0.1224, allocations: 11.44 kB / 409.2 MB, free: 4.598 MB / 302.1 MB Notification: Performance of SimCode: time 2.4e-07/0.1224, allocations: 0 / 409.2 MB, free: 4.598 MB / 302.1 MB Notification: Performance of Templates: time 0.002221/0.1246, allocations: 0.9559 MB / 410.2 MB, free: 3.645 MB / 302.1 MB make -j1 -f Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlow.makefile make -j1 -f Physiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlow.makefile clang++ NOTFOUND -Winvalid-pch -O0 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/c/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlowCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlowCalcHelperMain.cpp clang: error: no such file or directory: 'NOTFOUND' make: *** [: OMCppPhysiolibrary_Physiolibrary.Thermal.Examples.SkinHeatFlowCalcHelperMain.o] Error 1