Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo", uses=false) Using package Physiolibrary with version 2.3.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo) Using package Modelica with version 3.2.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") translateModel(Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001007/0.001007, allocations: 102.7 kB / 15.71 MB, free: 460 kB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001008/0.001008, allocations: 174.6 kB / 16.58 MB, free: 6.863 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo): time 1.704/1.704, allocations: 205.4 MB / 222.8 MB, free: 5.652 MB / 174.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1238:16-1238:88:writable] Warning: The file was not encoded in UTF-8: "

[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "

Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.1002/0.1002, allocations: 15.4 MB / 286.4 MB, free: 5.887 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0006007/0.0006008, allocations: 12 kB / 348.3 MB, free: 18.2 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1128/0.1134, allocations: 51.42 MB / 399.7 MB, free: 14.66 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC): time 0.009301/0.1228, allocations: 9.51 MB / 409.2 MB, free: 5.117 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.01892/0.1417, allocations: 10.81 MB / 420 MB, free: 10.28 MB / 318.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.002657/0.1445, allocations: 59.5 kB / 420.1 MB, free: 10.22 MB / 318.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0008003/0.1453, allocations: 297.5 kB / 420.4 MB, free: 9.926 MB / 318.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit‘. Notification: Performance of NFTyping.typeBindings: time 0.00614/0.1514, allocations: 1.683 MB / 422.1 MB, free: 8.234 MB / 318.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. Notification: Performance of NFTyping.typeClassSections: time 0.005208/0.1566, allocations: 1.661 MB / 423.7 MB, free: 6.57 MB / 318.1 MB Notification: Performance of NFFlatten.flatten: time 0.003915/0.1606, allocations: 2.806 MB / 426.5 MB, free: 3.754 MB / 318.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0008451/0.1614, allocations: 494.7 kB / 427 MB, free: 3.25 MB / 318.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.001393/0.1628, allocations: 0.8052 MB / 427.8 MB, free: 2.441 MB / 318.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001686/0.1645, allocations: 1.202 MB / 429 MB, free: 1.234 MB / 318.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0001811/0.1647, allocations: 72 kB / 429.1 MB, free: 1.164 MB / 318.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0002597/0.165, allocations: 72 kB / 429.2 MB, free: 1.094 MB / 318.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0004962/0.1655, allocations: 442.2 kB / 429.6 MB, free: 0.6602 MB / 318.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0004812/0.166, allocations: 396.5 kB / 430 MB, free: 272 kB / 318.1 MB Notification: Performance of NFConvertDAE.convert: time 0.2512/0.4172, allocations: 1.474 MB / 431.5 MB, free: 13.85 MB / 318.1 MB Notification: Performance of FrontEnd - DAE generated: time 7.464e-06/0.4173, allocations: 0 / 431.5 MB, free: 13.85 MB / 318.1 MB Notification: Performance of FrontEnd: time 2.475e-06/0.4173, allocations: 0 / 431.5 MB, free: 13.85 MB / 318.1 MB Notification: Performance of Transformations before backend: time 6.285e-05/0.4174, allocations: 2 kB / 431.5 MB, free: 13.85 MB / 318.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 287 * Number of variables: 287 Notification: Performance of Generate backend data structure: time 0.005091/0.4224, allocations: 2.301 MB / 433.8 MB, free: 12.77 MB / 318.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.247e-05/0.4225, allocations: 13.23 kB / 433.8 MB, free: 12.77 MB / 318.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004019/0.4229, allocations: 241.4 kB / 434 MB, free: 12.64 MB / 318.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002331/0.4252, allocations: 1.204 MB / 435.2 MB, free: 12.24 MB / 318.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 8.45e-05/0.4253, allocations: 94.58 kB / 435.3 MB, free: 12.23 MB / 318.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001947/0.4255, allocations: 117.8 kB / 435.4 MB, free: 12.23 MB / 318.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.002812/0.4284, allocations: 1.296 MB / 436.7 MB, free: 12.12 MB / 318.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 2.388e-05/0.4284, allocations: 0 / 436.7 MB, free: 12.12 MB / 318.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001134/0.4285, allocations: 45.47 kB / 436.8 MB, free: 12.12 MB / 318.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.633e-05/0.4286, allocations: 29.75 kB / 436.8 MB, free: 12.12 MB / 318.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002/0.4306, allocations: 1.052 MB / 437.9 MB, free: 12.11 MB / 318.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009416/0.44, allocations: 4.266 MB / 442.1 MB, free: 11.37 MB / 318.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001633/0.4417, allocations: 0.952 MB / 443.1 MB, free: 11.31 MB / 318.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.001026/0.4427, allocations: 0.6302 MB / 443.7 MB, free: 11.3 MB / 318.1 MB Notification: Performance of preOpt evalFunc (simulation): time 7.958e-05/0.4428, allocations: 14.16 kB / 443.7 MB, free: 11.29 MB / 318.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 3.823e-05/0.4429, allocations: 49.55 kB / 443.8 MB, free: 11.25 MB / 318.1 MB Notification: Performance of pre-optimization done (n=98): time 3.487e-06/0.4429, allocations: 0 / 443.8 MB, free: 11.25 MB / 318.1 MB Notification: Performance of matching and sorting (n=161): time 0.0666/0.5095, allocations: 15.63 MB / 459.4 MB, free: 6.277 MB / 318.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.697e-05/0.5096, allocations: 94.42 kB / 459.5 MB, free: 6.168 MB / 318.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002453/0.512, allocations: 1.779 MB / 461.3 MB, free: 4.801 MB / 318.1 MB Notification: Performance of collectPreVariables (initialization): time 0.0003289/0.5124, allocations: 53.16 kB / 461.3 MB, free: 4.766 MB / 318.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0005743/0.513, allocations: 0.8736 MB / 462.2 MB, free: 4.305 MB / 318.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0004276/0.5134, allocations: 0.5386 MB / 462.7 MB, free: 3.844 MB / 318.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001206/0.5135, allocations: 41.19 kB / 462.8 MB, free: 3.832 MB / 318.1 MB Notification: Performance of setup shared object (initialization): time 0.0001229/0.5137, allocations: 378.5 kB / 463.1 MB, free: 3.484 MB / 318.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001562/0.5152, allocations: 1.063 MB / 464.2 MB, free: 2.77 MB / 318.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001619/0.5168, allocations: 1.474 MB / 465.7 MB, free: 1.523 MB / 318.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.001578/0.5184, allocations: 1.247 MB / 466.9 MB, free: 368 kB / 318.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.903e-06/0.5185, allocations: 4 kB / 466.9 MB, free: 364 kB / 318.1 MB Notification: Performance of matching and sorting (n=236) (initialization): time 0.01688/0.5353, allocations: 5.446 MB / 472.4 MB, free: 11.03 MB / 334.1 MB Notification: Performance of prepare postOptimizeDAE: time 4.165e-05/0.5354, allocations: 8 kB / 472.4 MB, free: 11.02 MB / 334.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.646e-05/0.5355, allocations: 12 kB / 472.4 MB, free: 11.01 MB / 334.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.01659/0.5521, allocations: 3.654 MB / 476.1 MB, free: 7.375 MB / 334.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001029/0.5531, allocations: 238.1 kB / 476.3 MB, free: 7.156 MB / 334.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.03607/0.5892, allocations: 19.21 MB / 495.5 MB, free: 3.723 MB / 350.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002519/0.5918, allocations: 111.8 kB / 495.6 MB, free: 3.613 MB / 350.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001754/0.592, allocations: 71.98 kB / 495.7 MB, free: 3.543 MB / 350.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 52 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (120): * Single equations (assignments): 118 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 1 {(7,75.5%) 52} * Non-linear torn systems: 1 {10 49} Notification: Performance of prepare postOptimizeDAE: time 0.001082/0.5931, allocations: 448.6 kB / 496.1 MB, free: 3.109 MB / 350.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003826/0.5935, allocations: 221.2 kB / 496.3 MB, free: 2.891 MB / 350.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0008916/0.5944, allocations: 343.1 kB / 496.7 MB, free: 2.551 MB / 350.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.521e-05/0.5944, allocations: 16 kB / 496.7 MB, free: 2.535 MB / 350.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 6.781e-05/0.5945, allocations: 8 kB / 496.7 MB, free: 2.527 MB / 350.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.636e-05/0.5945, allocations: 7.969 kB / 496.7 MB, free: 2.52 MB / 350.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003741/0.5982, allocations: 2.152 MB / 498.9 MB, free: 344 kB / 350.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 8.936e-06/0.5982, allocations: 4.875 kB / 498.9 MB, free: 340 kB / 350.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000499/0.5987, allocations: 95.8 kB / 498.9 MB, free: 248 kB / 350.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.0167/0.6155, allocations: 3.453 MB / 0.4906 GB, free: 12.81 MB / 366.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0003963/0.6159, allocations: 35.94 kB / 0.4907 GB, free: 12.78 MB / 366.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.03484/0.6508, allocations: 18.95 MB / 0.5092 GB, free: 9.57 MB / 382.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.658e-06/0.6508, allocations: 0 / 0.5092 GB, free: 9.57 MB / 382.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.01962/0.6705, allocations: 6.879 MB / 0.5159 GB, free: 2.738 MB / 382.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.001743/0.6723, allocations: 0.5219 MB / 0.5164 GB, free: 2.195 MB / 382.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0003306/0.6726, allocations: 32.06 kB / 0.5164 GB, free: 2.164 MB / 382.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001269/0.6739, allocations: 76.28 kB / 0.5165 GB, free: 2.09 MB / 382.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.000657/0.6746, allocations: 150.2 kB / 0.5166 GB, free: 1.945 MB / 382.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001071/0.6747, allocations: 39.94 kB / 0.5167 GB, free: 1.906 MB / 382.1 MB Notification: Performance of sorting global known variables: time 0.001736/0.6764, allocations: 1.18 MB / 0.5178 GB, free: 0.7109 MB / 382.1 MB Notification: Performance of sort global known variables: time 1.4e-07/0.6764, allocations: 0 / 0.5178 GB, free: 0.7109 MB / 382.1 MB Notification: Performance of remove unused functions: time 0.003188/0.6796, allocations: 0.9258 MB / 0.5187 GB, free: 15.78 MB / 398.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 2 * Number of states: 1 (hemoglobinConservationLaw.state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (45): * Single equations (assignments): 43 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 1 {(6,86.1%) 53} * Non-linear torn systems: 1 {10 49} Notification: Performance of Backend phase and start with SimCode phase: time 0.0002707/0.6799, allocations: 121.7 kB / 0.5189 GB, free: 15.66 MB / 398.1 MB Notification: Performance of simCode: created initialization part: time 0.00948/0.6894, allocations: 3.887 MB / 0.5226 GB, free: 11.78 MB / 398.1 MB Notification: Performance of simCode: created event and clocks part: time 7.444e-06/0.6894, allocations: 0 / 0.5226 GB, free: 11.78 MB / 398.1 MB Notification: Performance of simCode: created simulation system equations: time 0.007198/0.6966, allocations: 2.548 MB / 0.5251 GB, free: 9.215 MB / 398.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002755/0.6994, allocations: 404.6 kB / 0.5255 GB, free: 8.82 MB / 398.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.007276/0.7067, allocations: 4.47 MB / 0.5299 GB, free: 4.328 MB / 398.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001315/0.7081, allocations: 1.576 MB / 0.5314 GB, free: 2.723 MB / 398.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004586/0.7086, allocations: 119.4 kB / 0.5315 GB, free: 2.605 MB / 398.1 MB Notification: Performance of SimCode: time 1.784e-06/0.7086, allocations: 0 / 0.5315 GB, free: 2.605 MB / 398.1 MB Notification: Performance of Templates: time 0.0689/0.7775, allocations: 44.96 MB / 0.5754 GB, free: 5.629 MB / 446.1 MB make -j1 -f Physiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile make -j1 -f Physiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile clang++ NOTFOUND -Winvalid-pch -O0 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/c/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWCCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWCCalcHelperMain.cpp clang: error: no such file or directory: 'NOTFOUND' make: *** [: OMCppPhysiolibrary_Physiolibrary.SteadyStates.Examples.Allosteric_Hemoglobin_MWCCalcHelperMain.o] Error 1