[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...".
Defaulting to 7-bit ASCII with unknown characters replaced by '?'.
To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY").
To change it in a package: add a file package.encoding at the top-level.
Note: The Modelica Language Specification only allows files encoded in UTF-8.
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.1031/0.1031, allocations: 15.39 MB / 286.4 MB, free: 5.906 MB / 238.1 MB
Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.0005441/0.0005441, allocations: 16 kB / 348.3 MB, free: 18.19 MB / 254.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1187/0.1193, allocations: 51.42 MB / 399.7 MB, free: 14.66 MB / 302.1 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Hydraulic.Examples.MinimalCirculation): time 0.003172/0.1225, allocations: 2.416 MB / 402.1 MB, free: 12.22 MB / 302.1 MB
Notification: Performance of NFInst.instExpressions: time 0.004595/0.1271, allocations: 2.729 MB / 404.9 MB, free: 9.484 MB / 302.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0001734/0.1274, allocations: 7.938 kB / 404.9 MB, free: 9.477 MB / 302.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.0001568/0.1275, allocations: 31.7 kB / 404.9 MB, free: 9.445 MB / 302.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.arteries.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.arteries.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.arteries.Utilities.UnitConversions.findUnit‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.veins.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.veins.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.veins.Utilities.UnitConversions.findUnit‘.
Notification: Performance of NFTyping.typeBindings: time 0.0009792/0.1285, allocations: 298.7 kB / 405.2 MB, free: 9.152 MB / 302.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.arteries.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.arteries.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.veins.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Hydraulic.Examples.MinimalCirculation.veins.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
Notification: Performance of NFTyping.typeClassSections: time 0.0009678/0.1295, allocations: 363.3 kB / 405.6 MB, free: 8.797 MB / 302.1 MB
Notification: Performance of NFFlatten.flatten: time 0.0003283/0.1298, allocations: 306.4 kB / 405.9 MB, free: 8.496 MB / 302.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001771/0.13, allocations: 48.94 kB / 405.9 MB, free: 8.449 MB / 302.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0001493/0.1302, allocations: 99.62 kB / 406 MB, free: 8.352 MB / 302.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.000181/0.1303, allocations: 115.5 kB / 406.1 MB, free: 8.238 MB / 302.1 MB
Notification: Performance of NFPackage.collectConstants: time 3.035e-05/0.1304, allocations: 8 kB / 406.1 MB, free: 8.23 MB / 302.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 3.634e-05/0.1304, allocations: 15.94 kB / 406.1 MB, free: 8.215 MB / 302.1 MB
Notification: Performance of NFScalarize.scalarize: time 4.62e-05/0.1305, allocations: 35.84 kB / 406.2 MB, free: 8.18 MB / 302.1 MB
Notification: Performance of NFVerifyModel.verify: time 7.255e-05/0.1306, allocations: 69.58 kB / 406.2 MB, free: 8.105 MB / 302.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.0002588/0.1308, allocations: 171.8 kB / 406.4 MB, free: 7.938 MB / 302.1 MB
Notification: Performance of FrontEnd - DAE generated: time 5.33e-06/0.1308, allocations: 4 kB / 406.4 MB, free: 7.934 MB / 302.1 MB
Notification: Performance of FrontEnd: time 2.184e-06/0.1308, allocations: 0 / 406.4 MB, free: 7.934 MB / 302.1 MB
Notification: Performance of Transformations before backend: time 5.21e-06/0.1309, allocations: 0 / 406.4 MB, free: 7.934 MB / 302.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
* Number of equations: 37
* Number of variables: 37
Notification: Performance of Generate backend data structure: time 0.00095/0.1318, allocations: 0.5428 MB / 407 MB, free: 7.336 MB / 302.1 MB
Notification: Performance of prepare preOptimizeDAE: time 4.263e-05/0.1319, allocations: 16.03 kB / 407 MB, free: 7.32 MB / 302.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 7.924e-05/0.132, allocations: 27.67 kB / 407 MB, free: 7.293 MB / 302.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003574/0.1323, allocations: 269.5 kB / 407.3 MB, free: 6.992 MB / 302.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.347e-05/0.1323, allocations: 16 kB / 407.3 MB, free: 6.977 MB / 302.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 4.535e-05/0.1324, allocations: 16 kB / 407.3 MB, free: 6.961 MB / 302.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0004068/0.1328, allocations: 189 kB / 407.5 MB, free: 6.77 MB / 302.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.275e-05/0.1328, allocations: 4 kB / 407.5 MB, free: 6.766 MB / 302.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.189e-05/0.1329, allocations: 8 kB / 407.5 MB, free: 6.758 MB / 302.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 8.205e-06/0.1329, allocations: 7.938 kB / 407.5 MB, free: 6.75 MB / 302.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004215/0.1333, allocations: 171.8 kB / 407.7 MB, free: 6.582 MB / 302.1 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001061/0.1344, allocations: 0.6166 MB / 408.3 MB, free: 5.914 MB / 302.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0005244/0.1349, allocations: 275.6 kB / 408.6 MB, free: 5.617 MB / 302.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002625/0.1352, allocations: 116.8 kB / 408.7 MB, free: 5.5 MB / 302.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 2.487e-05/0.1352, allocations: 0 / 408.7 MB, free: 5.5 MB / 302.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0003551/0.1356, allocations: 147.2 kB / 408.8 MB, free: 5.344 MB / 302.1 MB
Notification: Performance of pre-optimization done (n=15): time 1.493e-06/0.1356, allocations: 0 / 408.8 MB, free: 5.344 MB / 302.1 MB
Notification: Performance of matching and sorting (n=15): time 0.0007128/0.1363, allocations: 277.2 kB / 409.1 MB, free: 5.066 MB / 302.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.168e-05/0.1364, allocations: 55.41 kB / 409.1 MB, free: 5 MB / 302.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0002664/0.1367, allocations: 258.6 kB / 409.4 MB, free: 4.738 MB / 302.1 MB
Notification: Performance of collectPreVariables (initialization): time 2.458e-05/0.1367, allocations: 25.7 kB / 409.4 MB, free: 4.707 MB / 302.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001098/0.1368, allocations: 144.4 kB / 409.6 MB, free: 4.562 MB / 302.1 MB
Notification: Performance of collectInitialBindings (initialization): time 5.47e-05/0.1369, allocations: 47.36 kB / 409.6 MB, free: 4.516 MB / 302.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 1.229e-05/0.1369, allocations: 4 kB / 409.6 MB, free: 4.512 MB / 302.1 MB
Notification: Performance of setup shared object (initialization): time 0.0001426/0.137, allocations: 334.8 kB / 409.9 MB, free: 4.176 MB / 302.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002084/0.1372, allocations: 79.94 kB / 410 MB, free: 4.098 MB / 302.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002127/0.1375, allocations: 106.6 kB / 410.1 MB, free: 3.984 MB / 302.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0002151/0.1377, allocations: 110.6 kB / 410.2 MB, free: 3.871 MB / 302.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 2.325e-06/0.1377, allocations: 0 / 410.2 MB, free: 3.871 MB / 302.1 MB
Notification: Performance of matching and sorting (n=24) (initialization): time 0.0005641/0.1383, allocations: 292.5 kB / 410.5 MB, free: 3.574 MB / 302.1 MB
Notification: Performance of prepare postOptimizeDAE: time 4.381e-05/0.1383, allocations: 29.7 kB / 410.5 MB, free: 3.539 MB / 302.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 7.283e-06/0.1383, allocations: 4 kB / 410.5 MB, free: 3.535 MB / 302.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 1.575e-05/0.1384, allocations: 0 / 410.5 MB, free: 3.535 MB / 302.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0002082/0.1386, allocations: 59.91 kB / 410.6 MB, free: 3.477 MB / 302.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 8.747e-06/0.1386, allocations: 4 kB / 410.6 MB, free: 3.473 MB / 302.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001609/0.1388, allocations: 35.73 kB / 410.6 MB, free: 3.438 MB / 302.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 2.068e-05/0.1388, allocations: 8 kB / 410.6 MB, free: 3.43 MB / 302.1 MB
Notification: Model statistics after passing the back-end for initialization:
* Number of independent subsystems: 3
* Number of states: 0 ()
* Number of discrete variables: 5 ($whenCondition1,$PRE.pulse.T_start,pulse.T_start,$PRE.pulse.count,pulse.count)
* Number of discrete states: 0 ()
* Number of clocked states: 0 ()
* Top-level inputs: 0
Notification: Strong component statistics for initialization (23):
* Single equations (assignments): 22
* Array equations: 0
* Algorithm blocks: 1
* Record equations: 0
* When equations: 0
* If-equations: 0
* Equation systems (linear and non-linear blocks): 0
* Torn equation systems: 0
* Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0001453/0.139, allocations: 142.6 kB / 410.8 MB, free: 3.281 MB / 302.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 3.781e-05/0.139, allocations: 31.7 kB / 410.8 MB, free: 3.25 MB / 302.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0005166/0.1395, allocations: 219.3 kB / 411 MB, free: 3.031 MB / 302.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 2.525e-06/0.1395, allocations: 0 / 411 MB, free: 3.031 MB / 302.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 8.115e-06/0.1395, allocations: 7.953 kB / 411 MB, free: 3.023 MB / 302.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 4.088e-06/0.1396, allocations: 0 / 411 MB, free: 3.023 MB / 302.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0008036/0.1404, allocations: 0.5723 MB / 411.6 MB, free: 2.395 MB / 302.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.573e-06/0.1404, allocations: 0 / 411.6 MB, free: 2.395 MB / 302.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001799/0.1406, allocations: 39.97 kB / 411.6 MB, free: 2.355 MB / 302.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 3.767e-06/0.1406, allocations: 0 / 411.6 MB, free: 2.355 MB / 302.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 2.157e-05/0.1406, allocations: 15.88 kB / 411.7 MB, free: 2.34 MB / 302.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.483e-06/0.1406, allocations: 3.938 kB / 411.7 MB, free: 2.336 MB / 302.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.382e-06/0.1406, allocations: 0 / 411.7 MB, free: 2.336 MB / 302.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0006842/0.1413, allocations: 399.1 kB / 412.1 MB, free: 1.93 MB / 302.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 9.509e-05/0.1414, allocations: 116.8 kB / 412.2 MB, free: 1.797 MB / 302.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 3.617e-05/0.1415, allocations: 4 kB / 412.2 MB, free: 1.793 MB / 302.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000169/0.1416, allocations: 23.94 kB / 412.2 MB, free: 1.77 MB / 302.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 6.268e-05/0.1417, allocations: 15.97 kB / 412.2 MB, free: 1.754 MB / 302.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.31e-05/0.1417, allocations: 4 kB / 412.2 MB, free: 1.75 MB / 302.1 MB
Notification: Performance of sorting global known variables: time 0.0001636/0.1419, allocations: 178 kB / 412.4 MB, free: 1.574 MB / 302.1 MB
Notification: Performance of sort global known variables: time 1.41e-07/0.1419, allocations: 4 kB / 412.4 MB, free: 1.57 MB / 302.1 MB
Notification: Performance of remove unused functions: time 0.0002894/0.1422, allocations: 55.84 kB / 412.5 MB, free: 1.516 MB / 302.1 MB
Notification: Model statistics after passing the back-end for simulation:
* Number of independent subsystems: 1
* Number of states: 2 (arteries.state,veins.state)
* Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
* Number of discrete states: 1 (pulse.count)
* Number of clocked states: 0 ()
* Top-level inputs: 0
Notification: Strong component statistics for simulation (15):
* Single equations (assignments): 13
* Array equations: 0
* Algorithm blocks: 0
* Record equations: 0
* When equations: 2
* If-equations: 0
* Equation systems (linear and non-linear blocks): 0
* Torn equation systems: 0
* Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001058/0.1423, allocations: 95.25 kB / 412.5 MB, free: 1.414 MB / 302.1 MB
Notification: Performance of simCode: created initialization part: time 0.0005077/0.1428, allocations: 244.2 kB / 412.8 MB, free: 1.164 MB / 302.1 MB
Notification: Performance of simCode: created event and clocks part: time 2.224e-06/0.1428, allocations: 0 / 412.8 MB, free: 1.164 MB / 302.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.0002048/0.1431, allocations: 88.02 kB / 412.9 MB, free: 1.078 MB / 302.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004357/0.1435, allocations: 48.81 kB / 412.9 MB, free: 1.031 MB / 302.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.000979/0.1445, allocations: 0.5373 MB / 413.5 MB, free: 472 kB / 302.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003368/0.1448, allocations: 0.7443 MB / 414.2 MB, free: 15.69 MB / 318.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 7.863e-05/0.1449, allocations: 31.42 kB / 414.2 MB, free: 15.66 MB / 318.1 MB
Notification: Performance of SimCode: time 2.51e-07/0.1449, allocations: 0 / 414.2 MB, free: 15.66 MB / 318.1 MB
Notification: Performance of Templates: time 0.005051/0.15, allocations: 2.876 MB / 417.1 MB, free: 12.78 MB / 318.1 MB
make -j1 -f Physiolibrary_Physiolibrary.Hydraulic.Examples.MinimalCirculation.makefile
make -j1 -f Physiolibrary_Physiolibrary.Hydraulic.Examples.MinimalCirculation.makefile clang++ NOTFOUND -Winvalid-pch -O0 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/c/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.Hydraulic.Examples.MinimalCirculationCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Hydraulic.Examples.MinimalCirculationCalcHelperMain.cpp
clang: error: no such file or directory: 'NOTFOUND'
make: *** [