[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...".
Defaulting to 7-bit ASCII with unknown characters replaced by '?'.
To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY").
To change it in a package: add a file package.encoding at the top-level.
Note: The Modelica Language Specification only allows files encoded in UTF-8.
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.09984/0.09984, allocations: 15.4 MB / 286.4 MB, free: 5.895 MB / 238.1 MB
Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed.
Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed.
Notification: Performance of FrontEnd - loaded program: time 0.0005375/0.0005379, allocations: 20 kB / 348.3 MB, free: 18.2 MB / 254.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1058/0.1063, allocations: 51.41 MB / 399.7 MB, free: 14.68 MB / 302.1 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Chemical.Examples.MichaelisMenten): time 0.003541/0.1099, allocations: 2.872 MB / 402.6 MB, free: 11.79 MB / 302.1 MB
Notification: Performance of NFInst.instExpressions: time 0.004317/0.1142, allocations: 2.796 MB / 405.4 MB, free: 8.984 MB / 302.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002339/0.1145, allocations: 15.88 kB / 405.4 MB, free: 8.969 MB / 302.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.0001908/0.1147, allocations: 51.55 kB / 405.5 MB, free: 8.918 MB / 302.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.UnitConversions.findUnit‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.UnitConversions.findUnit‘.
Notification: Performance of NFTyping.typeBindings: time 0.001063/0.1158, allocations: 362.3 kB / 405.8 MB, free: 8.562 MB / 302.1 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.ES.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.MichaelisMenten.E.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘.
Notification: Performance of NFTyping.typeClassSections: time 0.0009703/0.1167, allocations: 387.2 kB / 406.2 MB, free: 8.184 MB / 302.1 MB
Notification: Performance of NFFlatten.flatten: time 0.0005474/0.1173, allocations: 497.6 kB / 406.7 MB, free: 7.695 MB / 302.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001902/0.1175, allocations: 81.36 kB / 406.8 MB, free: 7.605 MB / 302.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0001633/0.1177, allocations: 147.3 kB / 406.9 MB, free: 7.461 MB / 302.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0003091/0.118, allocations: 203.1 kB / 407.1 MB, free: 7.262 MB / 302.1 MB
Notification: Performance of NFPackage.collectConstants: time 3.739e-05/0.118, allocations: 12 kB / 407.1 MB, free: 7.25 MB / 302.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 5.747e-05/0.1181, allocations: 12 kB / 407.1 MB, free: 7.238 MB / 302.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0001099/0.1182, allocations: 75.66 kB / 407.2 MB, free: 7.164 MB / 302.1 MB
Notification: Performance of NFVerifyModel.verify: time 7.91e-05/0.1183, allocations: 89.52 kB / 407.3 MB, free: 7.07 MB / 302.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.0002672/0.1186, allocations: 255.6 kB / 407.5 MB, free: 6.82 MB / 302.1 MB
Notification: Performance of FrontEnd - DAE generated: time 5.52e-06/0.1186, allocations: 4 kB / 407.5 MB, free: 6.816 MB / 302.1 MB
Notification: Performance of FrontEnd: time 1.744e-06/0.1186, allocations: 0 / 407.5 MB, free: 6.816 MB / 302.1 MB
Notification: Performance of Transformations before backend: time 7.163e-06/0.1186, allocations: 3.938 kB / 407.5 MB, free: 6.812 MB / 302.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
* Number of equations: 48
* Number of variables: 48
Notification: Performance of Generate backend data structure: time 0.001104/0.1197, allocations: 0.6385 MB / 408.2 MB, free: 6.125 MB / 302.1 MB
Notification: Performance of prepare preOptimizeDAE: time 4.248e-05/0.1198, allocations: 15.97 kB / 408.2 MB, free: 6.109 MB / 302.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 7.51e-05/0.1199, allocations: 43.48 kB / 408.2 MB, free: 6.066 MB / 302.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0005002/0.1204, allocations: 357.2 kB / 408.6 MB, free: 5.676 MB / 302.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 2.088e-05/0.1204, allocations: 12.44 kB / 408.6 MB, free: 5.664 MB / 302.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 5.511e-05/0.1205, allocations: 27.98 kB / 408.6 MB, free: 5.637 MB / 302.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0003733/0.1208, allocations: 237.8 kB / 408.9 MB, free: 5.395 MB / 302.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 9.849e-06/0.1209, allocations: 0 / 408.9 MB, free: 5.395 MB / 302.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.424e-05/0.1209, allocations: 8 kB / 408.9 MB, free: 5.387 MB / 302.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.145e-05/0.1209, allocations: 15.95 kB / 408.9 MB, free: 5.371 MB / 302.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0002587/0.1212, allocations: 153.6 kB / 409 MB, free: 5.223 MB / 302.1 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001624/0.1228, allocations: 0.8386 MB / 409.9 MB, free: 4.324 MB / 302.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0005079/0.1233, allocations: 233.1 kB / 410.1 MB, free: 4.078 MB / 302.1 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0001725/0.1235, allocations: 101.7 kB / 410.2 MB, free: 3.973 MB / 302.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 1.832e-05/0.1235, allocations: 4 kB / 410.2 MB, free: 3.969 MB / 302.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.975e-05/0.1236, allocations: 30.56 kB / 410.2 MB, free: 3.93 MB / 302.1 MB
Notification: Performance of pre-optimization done (n=17): time 1.643e-06/0.1236, allocations: 0 / 410.2 MB, free: 3.93 MB / 302.1 MB
Notification: Performance of matching and sorting (n=24): time 0.004889/0.1285, allocations: 1.36 MB / 411.6 MB, free: 2.535 MB / 302.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.493e-05/0.1286, allocations: 89.14 kB / 411.7 MB, free: 2.43 MB / 302.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004501/0.129, allocations: 402 kB / 412.1 MB, free: 2.031 MB / 302.1 MB
Notification: Performance of collectPreVariables (initialization): time 2.845e-05/0.1291, allocations: 29.7 kB / 412.1 MB, free: 1.996 MB / 302.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001612/0.1292, allocations: 204.2 kB / 412.3 MB, free: 1.793 MB / 302.1 MB
Notification: Performance of collectInitialBindings (initialization): time 7.778e-05/0.1293, allocations: 78.81 kB / 412.4 MB, free: 1.715 MB / 302.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 2.177e-05/0.1293, allocations: 8 kB / 412.4 MB, free: 1.707 MB / 302.1 MB
Notification: Performance of setup shared object (initialization): time 0.0001585/0.1295, allocations: 350.8 kB / 412.7 MB, free: 1.355 MB / 302.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002139/0.1297, allocations: 127.9 kB / 412.8 MB, free: 1.23 MB / 302.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002853/0.13, allocations: 221 kB / 413.1 MB, free: 0.9805 MB / 302.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0003081/0.1303, allocations: 165 kB / 413.2 MB, free: 0.8203 MB / 302.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.106e-06/0.1303, allocations: 4 kB / 413.2 MB, free: 0.8164 MB / 302.1 MB
Notification: Performance of matching and sorting (n=37) (initialization): time 0.002329/0.1327, allocations: 0.7349 MB / 414 MB, free: 72 kB / 302.1 MB
Notification: Performance of prepare postOptimizeDAE: time 2.108e-05/0.1327, allocations: 8 kB / 414 MB, free: 64 kB / 302.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 7.985e-06/0.1327, allocations: 0 / 414 MB, free: 64 kB / 302.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.002357/0.1351, allocations: 433 kB / 414.4 MB, free: 15.63 MB / 318.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0001645/0.1353, allocations: 43.98 kB / 414.4 MB, free: 15.59 MB / 318.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.00583/0.1411, allocations: 4.564 MB / 419 MB, free: 10.75 MB / 318.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003058/0.1414, allocations: 19.97 kB / 419 MB, free: 10.73 MB / 318.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 2.43e-05/0.1415, allocations: 12 kB / 419 MB, free: 10.71 MB / 318.1 MB
Notification: Model statistics after passing the back-end for initialization:
* Number of independent subsystems: 11
* Number of states: 0 ()
* Number of discrete variables: 0 ()
* Number of discrete states: 0 ()
* Number of clocked states: 0 ()
* Top-level inputs: 0
Notification: Strong component statistics for initialization (25):
* Single equations (assignments): 23
* Array equations: 0
* Algorithm blocks: 0
* Record equations: 0
* When equations: 0
* If-equations: 0
* Equation systems (linear and non-linear blocks): 0
* Torn equation systems: 2
* Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
* Linear torn systems: 1 {(1,100.0%) 6}
* Non-linear torn systems: 1 {1 6}
Notification: Performance of prepare postOptimizeDAE: time 0.0002094/0.1417, allocations: 157.8 kB / 419.2 MB, free: 10.55 MB / 318.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 8.519e-05/0.1418, allocations: 39.53 kB / 419.2 MB, free: 10.51 MB / 318.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00014/0.1419, allocations: 63.77 kB / 419.3 MB, free: 10.45 MB / 318.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 4.388e-06/0.1419, allocations: 4 kB / 419.3 MB, free: 10.45 MB / 318.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.033e-05/0.142, allocations: 0 / 419.3 MB, free: 10.45 MB / 318.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.214e-06/0.142, allocations: 3.984 kB / 419.3 MB, free: 10.44 MB / 318.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002901/0.1449, allocations: 1.187 MB / 420.5 MB, free: 9.191 MB / 318.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.446e-06/0.1449, allocations: 0 / 420.5 MB, free: 9.191 MB / 318.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 9.048e-05/0.145, allocations: 19.98 kB / 420.5 MB, free: 9.172 MB / 318.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.002208/0.1472, allocations: 429.1 kB / 420.9 MB, free: 8.746 MB / 318.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 2.46e-05/0.1473, allocations: 4.062 kB / 420.9 MB, free: 8.742 MB / 318.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.005428/0.1527, allocations: 4.338 MB / 425.3 MB, free: 4.117 MB / 318.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.514e-06/0.1527, allocations: 0 / 425.3 MB, free: 4.117 MB / 318.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002712/0.1554, allocations: 0.9381 MB / 426.2 MB, free: 3.152 MB / 318.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002332/0.1557, allocations: 156.6 kB / 426.4 MB, free: 2.98 MB / 318.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 4.767e-05/0.1558, allocations: 4.062 kB / 426.4 MB, free: 2.977 MB / 318.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002115/0.156, allocations: 19.92 kB / 426.4 MB, free: 2.957 MB / 318.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 8.203e-05/0.1561, allocations: 19.97 kB / 426.4 MB, free: 2.938 MB / 318.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.78e-05/0.1561, allocations: 4 kB / 426.4 MB, free: 2.934 MB / 318.1 MB
Notification: Performance of sorting global known variables: time 0.0003426/0.1564, allocations: 287.1 kB / 426.7 MB, free: 2.652 MB / 318.1 MB
Notification: Performance of sort global known variables: time 3.6e-07/0.1565, allocations: 3.938 kB / 426.7 MB, free: 2.648 MB / 318.1 MB
Notification: Performance of remove unused functions: time 0.0006834/0.1571, allocations: 140 kB / 426.8 MB, free: 2.512 MB / 318.1 MB
Notification: Model statistics after passing the back-end for simulation:
* Number of independent subsystems: 2
* Number of states: 1 (state[1])
* Number of discrete variables: 0 ()
* Number of discrete states: 0 ()
* Number of clocked states: 0 ()
* Top-level inputs: 0
Notification: Strong component statistics for simulation (13):
* Single equations (assignments): 11
* Array equations: 0
* Algorithm blocks: 0
* Record equations: 0
* When equations: 0
* If-equations: 0
* Equation systems (linear and non-linear blocks): 0
* Torn equation systems: 2
* Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
* Linear torn systems: 1 {(1,100.0%) 5}
* Non-linear torn systems: 1 {1 6}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001552/0.1573, allocations: 99.25 kB / 426.9 MB, free: 2.406 MB / 318.1 MB
Notification: Performance of simCode: created initialization part: time 0.001059/0.1584, allocations: 0.5984 MB / 427.5 MB, free: 1.781 MB / 318.1 MB
Notification: Performance of simCode: created event and clocks part: time 3.126e-06/0.1584, allocations: 0.625 kB / 427.5 MB, free: 1.781 MB / 318.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.0006299/0.159, allocations: 445.5 kB / 428 MB, free: 1.32 MB / 318.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0005792/0.1596, allocations: 93.83 kB / 428 MB, free: 1.23 MB / 318.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001247/0.1609, allocations: 0.8461 MB / 428.9 MB, free: 356 kB / 318.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.2131/0.374, allocations: 0.8112 MB / 429.7 MB, free: 34.46 MB / 318.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.000164/0.3742, allocations: 31.61 kB / 429.7 MB, free: 34.45 MB / 318.1 MB
Notification: Performance of SimCode: time 1.573e-06/0.3742, allocations: 0 / 429.7 MB, free: 34.45 MB / 318.1 MB
Notification: Performance of Templates: time 0.01717/0.3914, allocations: 8.09 MB / 437.8 MB, free: 32.98 MB / 318.1 MB
make -j1 -f Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.makefile
make -j1 -f Physiolibrary_Physiolibrary.Chemical.Examples.MichaelisMenten.makefile clang++ NOTFOUND -Winvalid-pch -O0 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/c/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.Chemical.Examples.MichaelisMentenCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Chemical.Examples.MichaelisMentenCalcHelperMain.cpp
clang: error: no such file or directory: 'NOTFOUND'
make: *** [