Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo", uses=false) Using package Physiolibrary with version 2.3.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo) Using package Modelica with version 3.2.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC,tolerance=1e-14,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.000837/0.0008372, allocations: 102.4 kB / 15.71 MB, free: 460 kB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.0009443/0.0009443, allocations: 174.6 kB / 16.58 MB, free: 6.043 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo): time 1.662/1.662, allocations: 205.4 MB / 222.8 MB, free: 5.625 MB / 174.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1238:16-1238:88:writable] Warning: The file was not encoded in UTF-8: "

[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "

Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.08377/0.08377, allocations: 15.41 MB / 286.4 MB, free: 5.887 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Euler" Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0006077/0.0006077, allocations: 20 kB / 348.3 MB, free: 18.17 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1255/0.1261, allocations: 51.41 MB / 399.7 MB, free: 14.65 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC): time 0.009493/0.1356, allocations: 9.494 MB / 409.2 MB, free: 5.121 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.01663/0.1523, allocations: 10.87 MB / 420.1 MB, free: 10.22 MB / 318.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.002702/0.1551, allocations: 59.5 kB / 420.2 MB, free: 10.16 MB / 318.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0009565/0.156, allocations: 297.5 kB / 420.4 MB, free: 9.871 MB / 318.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:6137:6-6153:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit‘ contains a call to impure function ‘Modelica.Utilities.Streams.print‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5568:15-5660:17:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal‘ contains a call to impure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit‘. Notification: Performance of NFTyping.typeBindings: time 0.007509/0.1636, allocations: 1.691 MB / 422.1 MB, free: 8.172 MB / 318.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5714:15-5735:18:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Types.mo:5776:15-5812:24:writable] Warning: Pure function ‘Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison‘ contains a call to impure function ‘Modelica.Utilities.Files.createDirectory‘. Notification: Performance of NFTyping.typeClassSections: time 0.005912/0.1695, allocations: 1.669 MB / 423.8 MB, free: 6.5 MB / 318.1 MB Notification: Performance of NFFlatten.flatten: time 0.005053/0.1746, allocations: 2.806 MB / 426.6 MB, free: 3.684 MB / 318.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.001484/0.1761, allocations: 498.7 kB / 427.1 MB, free: 3.176 MB / 318.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.00215/0.1782, allocations: 0.7974 MB / 427.9 MB, free: 2.375 MB / 318.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.002863/0.1811, allocations: 1.206 MB / 429.1 MB, free: 1.164 MB / 318.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0008751/0.182, allocations: 72 kB / 429.2 MB, free: 1.094 MB / 318.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.001105/0.1831, allocations: 76 kB / 429.2 MB, free: 1.02 MB / 318.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0006909/0.1838, allocations: 438.2 kB / 429.7 MB, free: 0.5898 MB / 318.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0008194/0.1846, allocations: 396.5 kB / 430.1 MB, free: 200 kB / 318.1 MB Notification: Performance of NFConvertDAE.convert: time 0.2473/0.4319, allocations: 1.474 MB / 431.5 MB, free: 13.82 MB / 318.1 MB Notification: Performance of FrontEnd - DAE generated: time 1.023e-05/0.432, allocations: 1.938 kB / 431.5 MB, free: 13.82 MB / 318.1 MB Notification: Performance of FrontEnd: time 4.618e-06/0.432, allocations: 4.219 kB / 431.5 MB, free: 13.82 MB / 318.1 MB Notification: Performance of Transformations before backend: time 6.499e-05/0.4321, allocations: 0 / 431.5 MB, free: 13.82 MB / 318.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 287 * Number of variables: 287 Notification: Performance of Generate backend data structure: time 0.005613/0.4377, allocations: 2.305 MB / 433.8 MB, free: 12.72 MB / 318.1 MB Notification: Performance of prepare preOptimizeDAE: time 5.187e-05/0.4378, allocations: 13.08 kB / 433.9 MB, free: 12.71 MB / 318.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004498/0.4382, allocations: 238.3 kB / 434.1 MB, free: 12.59 MB / 318.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.002374/0.4406, allocations: 1.203 MB / 435.3 MB, free: 12.19 MB / 318.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 9.117e-05/0.4407, allocations: 92.92 kB / 435.4 MB, free: 12.18 MB / 318.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001987/0.4409, allocations: 121.1 kB / 435.5 MB, free: 12.18 MB / 318.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.002758/0.4437, allocations: 1.293 MB / 436.8 MB, free: 12.07 MB / 318.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 2.168e-05/0.4437, allocations: 0 / 436.8 MB, free: 12.07 MB / 318.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001081/0.4438, allocations: 46.31 kB / 436.8 MB, free: 12.07 MB / 318.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.616e-05/0.4439, allocations: 29.62 kB / 436.9 MB, free: 12.07 MB / 318.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0021/0.446, allocations: 1.054 MB / 437.9 MB, free: 12.05 MB / 318.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.00876/0.4547, allocations: 4.268 MB / 442.2 MB, free: 11.32 MB / 318.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001427/0.4562, allocations: 0.9486 MB / 443.1 MB, free: 11.26 MB / 318.1 MB Notification: Performance of preOpt resolveLoops (simulation): time 0.000973/0.4572, allocations: 0.6346 MB / 443.8 MB, free: 11.24 MB / 318.1 MB Notification: Performance of preOpt evalFunc (simulation): time 7.465e-05/0.4573, allocations: 11.19 kB / 443.8 MB, free: 11.24 MB / 318.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.873e-05/0.4573, allocations: 49.42 kB / 443.8 MB, free: 11.2 MB / 318.1 MB Notification: Performance of pre-optimization done (n=98): time 3.757e-06/0.4573, allocations: 1.078 kB / 443.8 MB, free: 11.2 MB / 318.1 MB Notification: Performance of matching and sorting (n=161): time 0.06732/0.5246, allocations: 15.64 MB / 459.5 MB, free: 6.18 MB / 318.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 4.636e-05/0.5247, allocations: 94.42 kB / 459.6 MB, free: 6.07 MB / 318.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.002374/0.5271, allocations: 1.783 MB / 461.4 MB, free: 4.699 MB / 318.1 MB Notification: Performance of collectPreVariables (initialization): time 0.0002802/0.5274, allocations: 57.67 kB / 461.4 MB, free: 4.66 MB / 318.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.00065/0.5281, allocations: 0.8746 MB / 462.3 MB, free: 4.199 MB / 318.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0004743/0.5286, allocations: 0.5368 MB / 462.8 MB, free: 3.738 MB / 318.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 0.000122/0.5287, allocations: 39 kB / 462.9 MB, free: 3.73 MB / 318.1 MB Notification: Performance of setup shared object (initialization): time 0.0001009/0.5288, allocations: 381.1 kB / 463.2 MB, free: 3.383 MB / 318.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.001483/0.5303, allocations: 1.056 MB / 464.3 MB, free: 2.672 MB / 318.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.001594/0.5319, allocations: 1.474 MB / 465.8 MB, free: 1.43 MB / 318.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.001573/0.5335, allocations: 1.251 MB / 467 MB, free: 276 kB / 318.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.215e-06/0.5335, allocations: 4 kB / 467 MB, free: 272 kB / 318.1 MB Notification: Performance of matching and sorting (n=236) (initialization): time 0.01717/0.5507, allocations: 5.451 MB / 472.5 MB, free: 10.94 MB / 334.1 MB Notification: Performance of prepare postOptimizeDAE: time 4.399e-05/0.5507, allocations: 19.94 kB / 472.5 MB, free: 10.92 MB / 334.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 3.558e-05/0.5508, allocations: 9.969 kB / 472.5 MB, free: 10.91 MB / 334.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.01706/0.5678, allocations: 3.646 MB / 476.1 MB, free: 7.281 MB / 334.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001066/0.569, allocations: 241.1 kB / 476.4 MB, free: 7.062 MB / 334.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.03552/0.6045, allocations: 19.2 MB / 495.6 MB, free: 3.637 MB / 350.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002607/0.6072, allocations: 123.8 kB / 495.7 MB, free: 3.516 MB / 350.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001947/0.6074, allocations: 68 kB / 495.8 MB, free: 3.449 MB / 350.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 52 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (120): * Single equations (assignments): 118 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 1 {(7,75.5%) 52} * Non-linear torn systems: 1 {10 49} Notification: Performance of prepare postOptimizeDAE: time 0.001032/0.6084, allocations: 446.8 kB / 496.2 MB, free: 3.02 MB / 350.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0004005/0.6088, allocations: 225.1 kB / 496.4 MB, free: 2.797 MB / 350.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0008933/0.6097, allocations: 347.2 kB / 496.8 MB, free: 2.457 MB / 350.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.983e-05/0.6098, allocations: 20 kB / 496.8 MB, free: 2.438 MB / 350.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 6.89e-05/0.6098, allocations: 8 kB / 496.8 MB, free: 2.43 MB / 350.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.55e-05/0.6099, allocations: 7.969 kB / 496.8 MB, free: 2.422 MB / 350.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003573/0.6134, allocations: 2.15 MB / 498.9 MB, free: 248 kB / 350.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.284e-05/0.6135, allocations: 4.188 kB / 498.9 MB, free: 244 kB / 350.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004407/0.6139, allocations: 94.89 kB / 499 MB, free: 156 kB / 350.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.01682/0.6308, allocations: 3.467 MB / 0.4907 GB, free: 12.7 MB / 366.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0003551/0.6312, allocations: 27.98 kB / 0.4908 GB, free: 12.68 MB / 366.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.03571/0.6669, allocations: 18.94 MB / 0.5093 GB, free: 9.473 MB / 382.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.148e-06/0.667, allocations: 0 / 0.5093 GB, free: 9.473 MB / 382.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.01941/0.6864, allocations: 6.882 MB / 0.516 GB, free: 2.637 MB / 382.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.001783/0.6882, allocations: 0.5253 MB / 0.5165 GB, free: 2.09 MB / 382.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0003567/0.6886, allocations: 24 kB / 0.5165 GB, free: 2.066 MB / 382.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001354/0.69, allocations: 79.94 kB / 0.5166 GB, free: 1.988 MB / 382.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0007117/0.6907, allocations: 150.2 kB / 0.5167 GB, free: 1.844 MB / 382.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001155/0.6908, allocations: 40 kB / 0.5168 GB, free: 1.805 MB / 382.1 MB Notification: Performance of sorting global known variables: time 0.001864/0.6927, allocations: 1.17 MB / 0.5179 GB, free: 0.6172 MB / 382.1 MB Notification: Performance of sort global known variables: time 1.4e-07/0.6927, allocations: 6.406 kB / 0.5179 GB, free: 0.6133 MB / 382.1 MB Notification: Performance of remove unused functions: time 0.003111/0.6958, allocations: 0.9219 MB / 0.5188 GB, free: 15.69 MB / 398.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 2 * Number of states: 1 (hemoglobinConservationLaw.state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (45): * Single equations (assignments): 43 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 2 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 1 {(6,86.1%) 53} * Non-linear torn systems: 1 {10 49} Notification: Performance of Backend phase and start with SimCode phase: time 0.0002612/0.6961, allocations: 122.8 kB / 0.5189 GB, free: 15.56 MB / 398.1 MB Notification: Performance of simCode: created initialization part: time 0.009175/0.7053, allocations: 3.896 MB / 0.5227 GB, free: 11.68 MB / 398.1 MB Notification: Performance of simCode: created event and clocks part: time 3.667e-06/0.7053, allocations: 0 / 0.5227 GB, free: 11.68 MB / 398.1 MB Notification: Performance of simCode: created simulation system equations: time 0.006457/0.7117, allocations: 2.545 MB / 0.5252 GB, free: 9.113 MB / 398.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.002587/0.7144, allocations: 409.5 kB / 0.5256 GB, free: 8.715 MB / 398.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.007054/0.7214, allocations: 4.473 MB / 0.53 GB, free: 4.219 MB / 398.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.001332/0.7228, allocations: 1.572 MB / 0.5315 GB, free: 2.613 MB / 398.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004435/0.7232, allocations: 123.4 kB / 0.5316 GB, free: 2.492 MB / 398.1 MB Notification: Performance of SimCode: time 8.02e-07/0.7232, allocations: 0 / 0.5316 GB, free: 2.492 MB / 398.1 MB Notification: Performance of Templates: time 0.06812/0.7914, allocations: 44.97 MB / 0.5756 GB, free: 5.504 MB / 446.1 MB make -j1 -f Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile make -j1 -f Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWC.makefile clang++ NOTFOUND -Winvalid-pch -O0 -g -DNDEBUG -fPIC -std=c++11 -DBOOST_ALL_DYN_LINK -DUSE_DGESV -DUSE_LOGGER -DOMC_BUILD -DUSE_THREAD -DSUNDIALS_MAJOR_VERSION=5 -DSUNDIALS_MINOR_VERSION=4 -DPMC_USE_SUNDIALS -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/bin/../include/omc/cpp/" -I. -I"." -I"." -I"/var/lib/jenkins1/ws/OpenModelicaLibraryTestingWork/OpenModelica/OMCompiler/build/include/omc/c/sundials" -DMEASURETIME_PROFILEBLOCKS -DUSE_LOGGER -c -o OMCppPhysiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWCCalcHelperMain.o OMCppPhysiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWCCalcHelperMain.cpp clang: error: no such file or directory: 'NOTFOUND' make: *** [: OMCppPhysiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin_MWCCalcHelperMain.o] Error 1