[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07599/0.07599, allocations: 15.4 MB / 285.8 MB, free: 5.914 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005269/0.000527, allocations: 20 kB / 347.7 MB, free: 18.21 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.09423/0.09477, allocations: 51.41 MB / 399.1 MB, free: 14.68 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Thermal.Examples.ThermalBody_QHP): time 0.004238/0.09905, allocations: 3.216 MB / 402.3 MB, free: 11.45 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.006832/0.1059, allocations: 4.401 MB / 406.7 MB, free: 7.035 MB / 302.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0005029/0.1065, allocations: 19.88 kB / 406.7 MB, free: 7.016 MB / 302.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0002167/0.1067, allocations: 51.53 kB / 406.7 MB, free: 6.965 MB / 302.1 MB Notification: Performance of NFTyping.typeBindings: time 0.002218/0.1089, allocations: 0.5996 MB / 407.3 MB, free: 6.363 MB / 302.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.001709/0.1107, allocations: 0.5924 MB / 407.9 MB, free: 5.77 MB / 302.1 MB Notification: Performance of NFFlatten.flatten: time 0.0008682/0.1115, allocations: 479.5 kB / 408.4 MB, free: 5.301 MB / 302.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0002901/0.1118, allocations: 143.6 kB / 408.5 MB, free: 5.16 MB / 302.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0002502/0.1121, allocations: 163.4 kB / 408.7 MB, free: 5 MB / 302.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0003121/0.1124, allocations: 203 kB / 408.9 MB, free: 4.801 MB / 302.1 MB Notification: Performance of NFPackage.collectConstants: time 6.898e-05/0.1125, allocations: 20 kB / 408.9 MB, free: 4.781 MB / 302.1 MB Notification: Performance of NFFlatten.collectFunctions: time 8.006e-05/0.1126, allocations: 24 kB / 408.9 MB, free: 4.758 MB / 302.1 MB Notification: Performance of NFScalarize.scalarize: time 6.507e-05/0.1126, allocations: 63.7 kB / 409 MB, free: 4.695 MB / 302.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0001182/0.1128, allocations: 121.4 kB / 409.1 MB, free: 4.57 MB / 302.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0003435/0.1131, allocations: 375.2 kB / 409.5 MB, free: 4.203 MB / 302.1 MB Notification: Performance of FrontEnd - DAE generated: time 3.296e-06/0.1131, allocations: 0 / 409.5 MB, free: 4.203 MB / 302.1 MB Notification: Performance of FrontEnd: time 1.413e-06/0.1131, allocations: 0 / 409.5 MB, free: 4.203 MB / 302.1 MB Notification: Performance of Transformations before backend: time 1.704e-05/0.1132, allocations: 0 / 409.5 MB, free: 4.203 MB / 302.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 78 * Number of variables: 78 Notification: Performance of Generate backend data structure: time 0.001198/0.1144, allocations: 0.7203 MB / 410.2 MB, free: 3.434 MB / 302.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.891e-05/0.1144, allocations: 12.03 kB / 410.2 MB, free: 3.422 MB / 302.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001186/0.1145, allocations: 55.34 kB / 410.3 MB, free: 3.367 MB / 302.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0005296/0.1151, allocations: 380.8 kB / 410.7 MB, free: 2.953 MB / 302.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.971e-05/0.1151, allocations: 28.66 kB / 410.7 MB, free: 2.926 MB / 302.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 5.959e-05/0.1152, allocations: 39.94 kB / 410.7 MB, free: 2.887 MB / 302.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0004802/0.1157, allocations: 266 kB / 411 MB, free: 2.617 MB / 302.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 1.671e-05/0.1157, allocations: 7.953 kB / 411 MB, free: 2.609 MB / 302.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.641e-05/0.1157, allocations: 8 kB / 411 MB, free: 2.602 MB / 302.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.054e-05/0.1157, allocations: 8 kB / 411 MB, free: 2.594 MB / 302.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0003472/0.1161, allocations: 202.5 kB / 411.2 MB, free: 2.398 MB / 302.1 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.002036/0.1181, allocations: 1.677 MB / 412.9 MB, free: 0.5117 MB / 302.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.0003609/0.1185, allocations: 215.1 kB / 413.1 MB, free: 300 kB / 302.1 MB Notification: Performance of preOpt evalFunc (simulation): time 2.281e-05/0.1186, allocations: 4.234 kB / 413.1 MB, free: 296 kB / 302.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.484e-05/0.1186, allocations: 34.73 kB / 413.1 MB, free: 252 kB / 302.1 MB Notification: Performance of pre-optimization done (n=27): time 1.633e-06/0.1186, allocations: 0 / 413.1 MB, free: 252 kB / 302.1 MB Notification: Performance of matching and sorting (n=27): time 0.0005869/0.1192, allocations: 328.2 kB / 413.4 MB, free: 15.92 MB / 318.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 3.485e-05/0.1192, allocations: 59.41 kB / 413.5 MB, free: 15.85 MB / 318.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003887/0.1196, allocations: 386 kB / 413.9 MB, free: 15.46 MB / 318.1 MB Notification: Performance of collectPreVariables (initialization): time 2.599e-05/0.1197, allocations: 29.7 kB / 413.9 MB, free: 15.42 MB / 318.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0001551/0.1198, allocations: 228.4 kB / 414.1 MB, free: 15.2 MB / 318.1 MB Notification: Performance of collectInitialBindings (initialization): time 7.834e-05/0.1199, allocations: 102.5 kB / 414.2 MB, free: 15.1 MB / 318.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 1.27e-05/0.1199, allocations: 4 kB / 414.2 MB, free: 15.09 MB / 318.1 MB Notification: Performance of setup shared object (initialization): time 0.0001411/0.1201, allocations: 358.7 kB / 414.6 MB, free: 14.73 MB / 318.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001429/0.1202, allocations: 80.62 kB / 414.7 MB, free: 14.65 MB / 318.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.000175/0.1204, allocations: 141.3 kB / 414.8 MB, free: 14.5 MB / 318.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.0001668/0.1206, allocations: 92 kB / 414.9 MB, free: 14.41 MB / 318.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.787e-06/0.1206, allocations: 4 kB / 414.9 MB, free: 14.41 MB / 318.1 MB Notification: Performance of matching and sorting (n=39) (initialization): time 0.0004423/0.121, allocations: 300.9 kB / 415.2 MB, free: 14.11 MB / 318.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.888e-05/0.1211, allocations: 15.98 kB / 415.2 MB, free: 14.09 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 6.252e-06/0.1211, allocations: 0 / 415.2 MB, free: 14.09 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 1.745e-05/0.1211, allocations: 7.938 kB / 415.2 MB, free: 14.08 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0003095/0.1214, allocations: 63.91 kB / 415.3 MB, free: 14.02 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 7.645e-06/0.1214, allocations: 4 kB / 415.3 MB, free: 14.02 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0001911/0.1216, allocations: 35.59 kB / 415.3 MB, free: 13.98 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 2.078e-05/0.1217, allocations: 12 kB / 415.3 MB, free: 13.97 MB / 318.1 MB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 5 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (39): * Single equations (assignments): 39 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0001579/0.1218, allocations: 161.7 kB / 415.5 MB, free: 13.8 MB / 318.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 6.254e-05/0.1219, allocations: 47.38 kB / 415.5 MB, free: 13.75 MB / 318.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 8.981e-05/0.122, allocations: 52.66 kB / 415.6 MB, free: 13.7 MB / 318.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 4.859e-06/0.122, allocations: 3.984 kB / 415.6 MB, free: 13.7 MB / 318.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 6.021e-06/0.122, allocations: 4 kB / 415.6 MB, free: 13.7 MB / 318.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 3.666e-06/0.122, allocations: 0 / 415.6 MB, free: 13.7 MB / 318.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0004828/0.1225, allocations: 437.2 kB / 416 MB, free: 13.22 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 2.896e-06/0.1225, allocations: 0 / 416 MB, free: 13.22 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002581/0.1228, allocations: 47.92 kB / 416.1 MB, free: 13.17 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 6.462e-06/0.1228, allocations: 4 kB / 416.1 MB, free: 13.17 MB / 318.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.935e-05/0.1228, allocations: 4 kB / 416.1 MB, free: 13.16 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 2.224e-06/0.1228, allocations: 0 / 416.1 MB, free: 13.16 MB / 318.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.012e-06/0.1228, allocations: 0 / 416.1 MB, free: 13.16 MB / 318.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0006114/0.1235, allocations: 482.8 kB / 416.5 MB, free: 12.68 MB / 318.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0001391/0.1236, allocations: 136.5 kB / 416.7 MB, free: 12.52 MB / 318.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 5.046e-05/0.1237, allocations: 4 kB / 416.7 MB, free: 12.52 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0001814/0.1238, allocations: 19.94 kB / 416.7 MB, free: 12.5 MB / 318.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 4.238e-05/0.1239, allocations: 19.95 kB / 416.7 MB, free: 12.48 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 1.488e-05/0.1239, allocations: 8 kB / 416.7 MB, free: 12.47 MB / 318.1 MB Notification: Performance of sorting global known variables: time 0.0002697/0.1242, allocations: 267.1 kB / 417 MB, free: 12.21 MB / 318.1 MB Notification: Performance of sort global known variables: time 1.7e-07/0.1242, allocations: 0 / 417 MB, free: 12.21 MB / 318.1 MB Notification: Performance of remove unused functions: time 0.0003407/0.1245, allocations: 99.75 kB / 417.1 MB, free: 12.11 MB / 318.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 4 (core.state,GILumen.state,skeletalMuscle.state,skin.state) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (27): * Single equations (assignments): 27 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 9.73e-05/0.1246, allocations: 95.25 kB / 417.2 MB, free: 12.01 MB / 318.1 MB Notification: Performance of simCode: created initialization part: time 0.0004043/0.1251, allocations: 217 kB / 417.4 MB, free: 11.8 MB / 318.1 MB Notification: Performance of simCode: created event and clocks part: time 2.795e-06/0.1251, allocations: 8.062 kB / 417.4 MB, free: 11.79 MB / 318.1 MB Notification: Performance of simCode: created simulation system equations: time 0.0001769/0.1253, allocations: 115.8 kB / 417.5 MB, free: 11.68 MB / 318.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0004836/0.1257, allocations: 77.81 kB / 417.6 MB, free: 11.61 MB / 318.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.001237/0.127, allocations: 0.9049 MB / 418.5 MB, free: 10.67 MB / 318.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003728/0.1274, allocations: 0.8267 MB / 419.3 MB, free: 9.816 MB / 318.1 MB Notification: Performance of simCode: alias equations: time 0.0001469/0.1275, allocations: 43.27 kB / 419.4 MB, free: 9.773 MB / 318.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 7.694e-05/0.1276, allocations: 27.44 kB / 419.4 MB, free: 9.746 MB / 318.1 MB Notification: Performance of SimCode: time 3.2e-07/0.1276, allocations: 0 / 419.4 MB, free: 9.746 MB / 318.1 MB Notification: Performance of Templates: time 0.006719/0.1344, allocations: 3.243 MB / 422.6 MB, free: 6.504 MB / 318.1 MB make -j1 -f Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP.makefile Environment - environmentSimulation: (rm -f Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP.pipe ; mkfifo Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP.pipe >> ../files/Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP.sim & ./Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Thermal.Examples.ThermalBody_QHP.pipe 2>&1) Environment - environmentSimulation: