[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07763/0.07763, allocations: 15.4 MB / 285.8 MB, free: 6.02 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005261/0.0005262, allocations: 19.98 kB / 347.7 MB, free: 18.22 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.08419/0.08472, allocations: 51.4 MB / 399.1 MB, free: 14.7 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation): time 0.005619/0.09038, allocations: 5.864 MB / 404.9 MB, free: 8.809 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.0154/0.1058, allocations: 11.12 MB / 416 MB, free: 13.66 MB / 318.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.001198/0.1071, allocations: 43.62 kB / 416.1 MB, free: 13.61 MB / 318.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0005695/0.1077, allocations: 115 kB / 416.2 MB, free: 13.5 MB / 318.1 MB Notification: Performance of NFTyping.typeBindings: time 0.005252/0.1129, allocations: 1.573 MB / 417.8 MB, free: 11.92 MB / 318.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.004748/0.1177, allocations: 1.629 MB / 419.4 MB, free: 10.29 MB / 318.1 MB Notification: Performance of NFFlatten.flatten: time 0.002384/0.1201, allocations: 1.225 MB / 420.6 MB, free: 9.062 MB / 318.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0005786/0.1207, allocations: 249.6 kB / 420.9 MB, free: 8.801 MB / 318.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0009264/0.1216, allocations: 494.2 kB / 421.4 MB, free: 8.316 MB / 318.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.001112/0.1228, allocations: 0.5522 MB / 421.9 MB, free: 7.762 MB / 318.1 MB Notification: Performance of NFPackage.collectConstants: time 0.0002714/0.1231, allocations: 48 kB / 422 MB, free: 7.715 MB / 318.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.00037/0.1234, allocations: 52 kB / 422 MB, free: 7.664 MB / 318.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0002758/0.1237, allocations: 195.1 kB / 422.2 MB, free: 7.473 MB / 318.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0004085/0.1241, allocations: 277 kB / 422.5 MB, free: 7.195 MB / 318.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0008879/0.125, allocations: 0.8845 MB / 423.3 MB, free: 6.309 MB / 318.1 MB Notification: Performance of FrontEnd - DAE generated: time 2.826e-06/0.1251, allocations: 3.938 kB / 423.4 MB, free: 6.305 MB / 318.1 MB Notification: Performance of FrontEnd: time 4.128e-06/0.1251, allocations: 4 kB / 423.4 MB, free: 6.301 MB / 318.1 MB Notification: Performance of Transformations before backend: time 1.963e-05/0.1251, allocations: 0 / 423.4 MB, free: 6.301 MB / 318.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 209 * Number of variables: 209 Notification: Performance of Generate backend data structure: time 0.002458/0.1276, allocations: 1.398 MB / 424.8 MB, free: 4.852 MB / 318.1 MB Notification: Performance of prepare preOptimizeDAE: time 4.15e-05/0.1276, allocations: 16.02 kB / 424.8 MB, free: 4.836 MB / 318.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002324/0.1279, allocations: 142.3 kB / 424.9 MB, free: 4.695 MB / 318.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.001187/0.1291, allocations: 0.7327 MB / 425.6 MB, free: 3.906 MB / 318.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001513/0.1292, allocations: 137.3 kB / 425.8 MB, free: 3.758 MB / 318.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001228/0.1294, allocations: 99.98 kB / 425.9 MB, free: 3.66 MB / 318.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.00136/0.1307, allocations: 0.7491 MB / 426.6 MB, free: 2.906 MB / 318.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 2.66e-05/0.1308, allocations: 3.906 kB / 426.6 MB, free: 2.902 MB / 318.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.681e-05/0.1308, allocations: 39.98 kB / 426.7 MB, free: 2.863 MB / 318.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.709e-05/0.1309, allocations: 24 kB / 426.7 MB, free: 2.84 MB / 318.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001437/0.1323, allocations: 0.7417 MB / 427.4 MB, free: 2.098 MB / 318.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1484/0.2807, allocations: 2.206 MB / 429.6 MB, free: 35.6 MB / 318.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001642/0.2824, allocations: 0.8269 MB / 430.5 MB, free: 35.57 MB / 318.1 MB Notification: Performance of preOpt evalFunc (simulation): time 5.437e-05/0.2825, allocations: 17.52 kB / 430.5 MB, free: 35.57 MB / 318.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0008014/0.2833, allocations: 442.3 kB / 430.9 MB, free: 35.5 MB / 318.1 MB Notification: Performance of pre-optimization done (n=90): time 3.557e-06/0.2833, allocations: 0 / 430.9 MB, free: 35.5 MB / 318.1 MB Notification: Performance of matching and sorting (n=90): time 0.003402/0.2867, allocations: 1.642 MB / 432.6 MB, free: 35.04 MB / 318.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 3.73e-05/0.2868, allocations: 67.03 kB / 432.6 MB, free: 34.97 MB / 318.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0009151/0.2877, allocations: 0.8378 MB / 433.5 MB, free: 34.77 MB / 318.1 MB Notification: Performance of collectPreVariables (initialization): time 5.412e-05/0.2878, allocations: 47.58 kB / 433.5 MB, free: 34.72 MB / 318.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0002718/0.2881, allocations: 456.2 kB / 434 MB, free: 34.43 MB / 318.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.0002173/0.2883, allocations: 303 kB / 434.2 MB, free: 34.23 MB / 318.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 3.614e-05/0.2883, allocations: 20.19 kB / 434.3 MB, free: 34.22 MB / 318.1 MB Notification: Performance of setup shared object (initialization): time 7.615e-05/0.2884, allocations: 347.2 kB / 434.6 MB, free: 33.9 MB / 318.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0006526/0.2891, allocations: 307.1 kB / 434.9 MB, free: 33.81 MB / 318.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006905/0.2898, allocations: 460.5 kB / 435.4 MB, free: 33.56 MB / 318.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.0007391/0.2905, allocations: 360.9 kB / 435.7 MB, free: 33.43 MB / 318.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 4.238e-06/0.2905, allocations: 1.406 kB / 435.7 MB, free: 33.43 MB / 318.1 MB Notification: Performance of matching and sorting (n=132) (initialization): time 0.001979/0.2925, allocations: 1.111 MB / 436.8 MB, free: 33.01 MB / 318.1 MB Notification: Performance of prepare postOptimizeDAE: time 2.219e-05/0.2926, allocations: 11.98 kB / 436.8 MB, free: 33 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.056e-05/0.2926, allocations: 3.062 kB / 436.8 MB, free: 33 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.0004187/0.293, allocations: 136.7 kB / 437 MB, free: 32.94 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0008357/0.2938, allocations: 235.7 kB / 437.2 MB, free: 32.92 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.003222/0.2971, allocations: 5.768 MB / 443 MB, free: 27.24 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0007161/0.2978, allocations: 134.4 kB / 443.1 MB, free: 27.16 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.13e-05/0.2979, allocations: 39.58 kB / 443.1 MB, free: 27.16 MB / 318.1 MB Warning: Assuming fixed start value for the following 6 variables: timeVaryingElastanceRight.ts:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "duration of systole" type: Real timeVaryingElastanceRight.t0:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "time of beginning of the cardiac cycle" type: Real timeVaryingElastanceLeft.HP:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "heart period" type: Real timeVaryingElastanceLeft.t0:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "time of beginning of the cardiac cycle" type: Real timeVaryingElastanceLeft.ts:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "duration of systole" type: Real timeVaryingElastanceRight.HP:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "heart period" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 17 * Number of states: 0 () * Number of discrete variables: 18 ($whenCondition2,$whenCondition1,mitralValve.open,aorticValve.open,tricuspidValve.open,pulmonaryValve.open,$PRE.timeVaryingElastanceLeft.HP,$PRE.timeVaryingElastanceLeft.t0,$PRE.timeVaryingElastanceLeft.ts,$PRE.timeVaryingElastanceRight.HP,$PRE.timeVaryingElastanceRight.t0,$PRE.timeVaryingElastanceRight.ts,timeVaryingElastanceRight.t0,timeVaryingElastanceRight.HP,timeVaryingElastanceRight.ts,timeVaryingElastanceLeft.t0,timeVaryingElastanceLeft.HP,timeVaryingElastanceLeft.ts) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (120): * Single equations (assignments): 116 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 0 * Non-linear torn systems: 4 {1 1,1 5,1 5,1 1} Notification: Performance of prepare postOptimizeDAE: time 0.000433/0.2983, allocations: 271.4 kB / 443.4 MB, free: 26.95 MB / 318.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001191/0.2985, allocations: 117.8 kB / 443.5 MB, free: 26.89 MB / 318.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.001836/0.3003, allocations: 0.9846 MB / 444.5 MB, free: 26.5 MB / 318.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.197e-06/0.3003, allocations: 9 kB / 444.5 MB, free: 26.5 MB / 318.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 3.436e-06/0.3003, allocations: 0.5 kB / 444.5 MB, free: 26.5 MB / 318.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.128e-05/0.3003, allocations: 6.766 kB / 444.5 MB, free: 26.5 MB / 318.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001122/0.3015, allocations: 0.8696 MB / 445.4 MB, free: 26.05 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.587e-06/0.3015, allocations: 1.531 kB / 445.4 MB, free: 26.05 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0007169/0.3022, allocations: 163.6 kB / 445.5 MB, free: 26.04 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.000343/0.3026, allocations: 131 kB / 445.7 MB, free: 25.97 MB / 318.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.409e-05/0.3026, allocations: 24.3 kB / 445.7 MB, free: 25.96 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.003015/0.3056, allocations: 5.761 MB / 451.5 MB, free: 20.25 MB / 318.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.423e-06/0.3057, allocations: 128 / 451.5 MB, free: 20.25 MB / 318.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002408/0.3081, allocations: 1.359 MB / 452.8 MB, free: 19.7 MB / 318.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0003398/0.3084, allocations: 262.8 kB / 453.1 MB, free: 19.49 MB / 318.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001188/0.3086, allocations: 18.8 kB / 453.1 MB, free: 19.48 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.000473/0.309, allocations: 57.62 kB / 453.2 MB, free: 19.46 MB / 318.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001256/0.3092, allocations: 59.62 kB / 453.2 MB, free: 19.46 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.834e-05/0.3092, allocations: 30.55 kB / 453.2 MB, free: 19.45 MB / 318.1 MB Notification: Performance of sorting global known variables: time 0.0006263/0.3099, allocations: 0.5439 MB / 453.8 MB, free: 19.21 MB / 318.1 MB Notification: Performance of sort global known variables: time 2.41e-07/0.3099, allocations: 0 / 453.8 MB, free: 19.21 MB / 318.1 MB Notification: Performance of remove unused functions: time 0.001054/0.3109, allocations: 312.2 kB / 454.1 MB, free: 19.16 MB / 318.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 12 (pulmonaryVeinsInertia.state,pulmonaryArterialInertia.state,pulmonaryVeins.state,leftVentricle.state,aorta.state,aorticInertia.state,arteries.state,systemicInertia.state,rightVentricle.state,pulmonaryArtery.state,pulmonaryArterioles.state,veins.state) * Number of discrete variables: 12 ($whenCondition2,$whenCondition1,mitralValve.open,aorticValve.open,tricuspidValve.open,pulmonaryValve.open,timeVaryingElastanceLeft.HP,timeVaryingElastanceLeft.t0,timeVaryingElastanceLeft.ts,timeVaryingElastanceRight.HP,timeVaryingElastanceRight.t0,timeVaryingElastanceRight.ts) * Number of discrete states: 6 (timeVaryingElastanceRight.ts,timeVaryingElastanceRight.t0,timeVaryingElastanceLeft.ts,timeVaryingElastanceLeft.t0,timeVaryingElastanceLeft.HP,timeVaryingElastanceRight.HP) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (78): * Single equations (assignments): 68 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 0 * Non-linear torn systems: 4 {1 1,1 5,1 1,1 5} Notification: Performance of Backend phase and start with SimCode phase: time 0.000135/0.3111, allocations: 123.7 kB / 454.2 MB, free: 19.05 MB / 318.1 MB Notification: Performance of simCode: created initialization part: time 0.001879/0.313, allocations: 1.278 MB / 455.5 MB, free: 18.36 MB / 318.1 MB Notification: Performance of simCode: created event and clocks part: time 2.214e-06/0.313, allocations: 1.375 kB / 455.5 MB, free: 18.36 MB / 318.1 MB Notification: Performance of simCode: created simulation system equations: time 0.00103/0.314, allocations: 0.8873 MB / 456.4 MB, free: 17.77 MB / 318.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00091/0.315, allocations: 245.7 kB / 456.6 MB, free: 17.68 MB / 318.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002497/0.3175, allocations: 2.309 MB / 458.9 MB, free: 16.35 MB / 318.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003459/0.3178, allocations: 1.092 MB / 460 MB, free: 15.46 MB / 318.1 MB Notification: Performance of simCode: alias equations: time 0.0004409/0.3183, allocations: 135.7 kB / 460.1 MB, free: 15.41 MB / 318.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0001837/0.3185, allocations: 90.16 kB / 460.2 MB, free: 15.38 MB / 318.1 MB Notification: Performance of SimCode: time 4.31e-07/0.3185, allocations: 3.938 kB / 460.2 MB, free: 15.38 MB / 318.1 MB Notification: Performance of Templates: time 0.0175/0.336, allocations: 12.71 MB / 473 MB, free: 3.934 MB / 318.1 MB make -j1 -f Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.makefile Environment - environmentSimulation: (rm -f Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe ; mkfifo Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe >> ../files/Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.sim & ./Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe 2>&1) Environment - environmentSimulation: