Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo", uses=false) Using package Physiolibrary with version 2.3.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo) Using package Modelica with version 3.2.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts,tolerance=1e-14,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts") translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts,tolerance=1e-14,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001015/0.001014, allocations: 99.62 kB / 15.05 MB, free: 1.105 MB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001002/0.001002, allocations: 177.3 kB / 15.95 MB, free: 216 kB / 14.72 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 3.2.3+maint.om/package.mo): time 1.277/1.277, allocations: 205.4 MB / 222.1 MB, free: 5.648 MB / 174.1 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1238:16-1238:88:writable] Warning: The file was not encoded in UTF-8: "

[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "

Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07646/0.07646, allocations: 15.39 MB / 285.8 MB, free: 5.895 MB / 238.1 MB Warning: Ignoring unknown experiment annotation option: __Dymola_Algorithm = "Euler" Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005211/0.0005211, allocations: 16 kB / 347.7 MB, free: 18.16 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.08315/0.08369, allocations: 51.41 MB / 399.1 MB, free: 14.64 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts): time 0.2232/0.3069, allocations: 84.77 MB / 483.9 MB, free: 3.355 MB / 334.1 MB Notification: Performance of NFInst.instExpressions: time 0.3776/0.6845, allocations: 155.1 MB / 0.624 GB, free: 2.668 MB / 446.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0246/0.7091, allocations: 0.7307 MB / 0.6247 GB, free: 2.668 MB / 446.1 MB Notification: Performance of NFTyping.typeComponents: time 0.01342/0.7226, allocations: 2.997 MB / 0.6276 GB, free: 1.719 MB / 446.1 MB Notification: Performance of NFTyping.typeBindings: time 0.06901/0.7916, allocations: 22.9 MB / 0.65 GB, free: 13.95 MB / 462.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.06297/0.8546, allocations: 22.35 MB / 0.6718 GB, free: 8.973 MB / 462.1 MB Notification: Performance of NFFlatten.flatten: time 0.09687/0.9515, allocations: 76.72 MB / 0.7467 GB, free: 13.98 MB / 0.5137 GB Notification: Performance of NFFlatten.resolveConnections: time 0.05649/1.008, allocations: 34.89 MB / 0.7808 GB, free: 10.98 MB / 0.545 GB Notification: Performance of NFEvalConstants.evaluate: time 0.04468/1.053, allocations: 26.71 MB / 0.8069 GB, free: 168 kB / 0.5606 GB Notification: Performance of NFSimplifyModel.simplify: time 0.5718/1.625, allocations: 38.5 MB / 0.8445 GB, free: 36.16 MB / 0.5607 GB Notification: Performance of NFPackage.collectConstants: time 0.02347/1.648, allocations: 2.951 MB / 0.8474 GB, free: 36.16 MB / 0.5607 GB Notification: Performance of NFFlatten.collectFunctions: time 0.03353/1.682, allocations: 3.161 MB / 0.8504 GB, free: 36.16 MB / 0.5607 GB Notification: Performance of NFScalarize.scalarize: time 0.0329/1.715, allocations: 16.71 MB / 0.8668 GB, free: 35.95 MB / 0.5607 GB Notification: Performance of NFVerifyModel.verify: time 0.03504/1.75, allocations: 19.66 MB / 0.886 GB, free: 35.59 MB / 0.5607 GB Notification: Performance of NFConvertDAE.convert: time 0.1393/1.889, allocations: 157.3 MB / 1.04 GB, free: 11.64 MB / 0.6544 GB Notification: Performance of FrontEnd - DAE generated: time 3.566e-06/1.889, allocations: 0 / 1.04 GB, free: 11.64 MB / 0.6544 GB Notification: Performance of FrontEnd: time 1.734e-06/1.889, allocations: 0 / 1.04 GB, free: 11.64 MB / 0.6544 GB Notification: Performance of Transformations before backend: time 0.004681/1.894, allocations: 1.812 kB / 1.04 GB, free: 11.64 MB / 0.6544 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 12295 * Number of variables: 12295 Notification: Performance of Generate backend data structure: time 0.7507/2.644, allocations: 100.3 MB / 1.138 GB, free: 131.4 MB / 0.6545 GB Notification: Performance of prepare preOptimizeDAE: time 3.294e-05/2.644, allocations: 8.031 kB / 1.138 GB, free: 131.4 MB / 0.6545 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0382/2.683, allocations: 9.108 MB / 1.146 GB, free: 122.1 MB / 0.6545 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.1727/2.855, allocations: 89.42 MB / 1.234 GB, free: 45.59 MB / 0.6545 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.003573/2.859, allocations: 3.933 MB / 1.238 GB, free: 41.65 MB / 0.6545 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.02503/2.884, allocations: 5.139 MB / 1.243 GB, free: 36.52 MB / 0.6545 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.8462/3.73, allocations: 90.87 MB / 1.331 GB, free: 146.3 MB / 0.7017 GB Notification: Performance of preOpt findStateOrder (simulation): time 0.002846/3.733, allocations: 46.09 kB / 1.331 GB, free: 146.3 MB / 0.7017 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.02595/3.759, allocations: 1.902 MB / 1.333 GB, free: 146.3 MB / 0.7017 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.002253/3.761, allocations: 1.148 MB / 1.334 GB, free: 146.3 MB / 0.7017 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1899/3.951, allocations: 93.94 MB / 1.426 GB, free: 120.5 MB / 0.7017 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.415/5.366, allocations: 345.3 MB / 1.763 GB, free: 124.7 MB / 0.749 GB Notification: Performance of preOpt comSubExp (simulation): time 0.09732/5.463, allocations: 65.63 MB / 1.827 GB, free: 70.35 MB / 0.749 GB Notification: Performance of preOpt evalFunc (simulation): time 0.00456/5.468, allocations: 492.8 kB / 1.828 GB, free: 69.87 MB / 0.749 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0007634/5.469, allocations: 0.7252 MB / 1.829 GB, free: 69.12 MB / 0.749 GB Notification: Performance of pre-optimization done (n=3775): time 5.648e-05/5.469, allocations: 3.938 kB / 1.829 GB, free: 69.11 MB / 0.749 GB Notification: Performance of matching and sorting (n=5675): time 30.12/35.59, allocations: 6.382 GB / 8.211 GB, free: 101.1 MB / 0.8584 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.001897/35.59, allocations: 7.189 MB / 8.218 GB, free: 92.3 MB / 0.8584 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.6523/36.24, allocations: 97.22 MB / 8.313 GB, free: 193 MB / 0.8584 GB Notification: Performance of collectPreVariables (initialization): time 0.01666/36.26, allocations: 1.116 MB / 8.314 GB, free: 193 MB / 0.8584 GB Notification: Performance of collectInitialEqns (initialization): time 0.05541/36.32, allocations: 39.48 MB / 8.352 GB, free: 188.1 MB / 0.8584 GB Notification: Performance of collectInitialBindings (initialization): time 0.03526/36.35, allocations: 19.68 MB / 8.371 GB, free: 173.9 MB / 0.8584 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.02017/36.37, allocations: 1.476 MB / 8.373 GB, free: 172.7 MB / 0.8584 GB Notification: Performance of setup shared object (initialization): time 0.007647/36.38, allocations: 3.433 MB / 8.376 GB, free: 171.1 MB / 0.8584 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.1282/36.51, allocations: 82.12 MB / 8.456 GB, free: 137.6 MB / 0.8584 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.1506/36.66, allocations: 105.2 MB / 8.559 GB, free: 75.45 MB / 0.8584 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.5957/37.25, allocations: 95.6 MB / 8.653 GB, free: 191.4 MB / 0.8584 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.001051/37.26, allocations: 206.2 kB / 8.653 GB, free: 191.4 MB / 0.8584 GB Notification: Performance of matching and sorting (n=9665) (initialization): time 1.905/39.16, allocations: 0.5025 GB / 9.155 GB, free: 127.8 MB / 0.8584 GB Notification: Performance of prepare postOptimizeDAE: time 0.001187/39.16, allocations: 313.4 kB / 9.156 GB, free: 127.8 MB / 0.8584 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.001458/39.16, allocations: 0.7072 MB / 9.156 GB, free: 127.8 MB / 0.8584 GB Notification: Performance of postOpt tearingSystem (initialization): time 1.669/40.83, allocations: 443.4 MB / 9.589 GB, free: 35.56 MB / 0.874 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.05387/40.89, allocations: 13.82 MB / 9.603 GB, free: 22.66 MB / 0.874 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.975/44.86, allocations: 1.099 GB / 10.7 GB, free: 151.3 MB / 0.8897 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.1174/44.98, allocations: 9.66 MB / 10.71 GB, free: 150.8 MB / 0.8897 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.02798/45.01, allocations: 3.124 MB / 10.71 GB, free: 150.2 MB / 0.8897 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 3305 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (6885): * Single equations (assignments): 6865 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 20 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 10 {(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114} * Non-linear torn systems: 10 {34 106,34 106,34 106,34 106,34 106,34 106,34 106,34 106,34 106,34 106} Notification: Performance of prepare postOptimizeDAE: time 0.1053/45.11, allocations: 39.99 MB / 10.75 GB, free: 131.3 MB / 0.8897 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0433/45.15, allocations: 8.01 MB / 10.76 GB, free: 131.3 MB / 0.8897 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.05536/45.21, allocations: 14.01 MB / 10.77 GB, free: 121.6 MB / 0.8897 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0003903/45.21, allocations: 0.5739 MB / 10.78 GB, free: 121.6 MB / 0.8897 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0008306/45.21, allocations: 272.8 kB / 10.78 GB, free: 121.6 MB / 0.8897 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.001105/45.21, allocations: 331.6 kB / 10.78 GB, free: 121.6 MB / 0.8897 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 3.381/48.59, allocations: 0.8402 GB / 11.62 GB, free: 118.3 MB / 0.9209 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.003252/48.6, allocations: 0.4901 MB / 11.62 GB, free: 118.3 MB / 0.9209 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02579/48.62, allocations: 6.05 MB / 11.62 GB, free: 118.3 MB / 0.9209 GB Notification: Performance of postOpt tearingSystem (simulation): time 1.587/50.21, allocations: 376.1 MB / 11.99 GB, free: 153.4 MB / 0.9365 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.02002/50.23, allocations: 1.816 MB / 11.99 GB, free: 153.4 MB / 0.9365 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.039/53.27, allocations: 1.035 GB / 13.03 GB, free: 21.51 MB / 0.9365 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 0.001052/53.27, allocations: 0.7707 MB / 13.03 GB, free: 20.9 MB / 0.9365 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 4.06/57.33, allocations: 1.588 GB / 14.61 GB, free: 444.9 MB / 1.265 GB Notification: Performance of postOpt removeConstants (simulation): time 0.09732/57.43, allocations: 28.1 MB / 14.64 GB, free: 434.1 MB / 1.265 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.04592/57.47, allocations: 1.902 MB / 14.64 GB, free: 432.2 MB / 1.265 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.1153/57.59, allocations: 7.642 MB / 14.65 GB, free: 424.6 MB / 1.265 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.04905/57.64, allocations: 7.472 MB / 14.66 GB, free: 417.1 MB / 1.265 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.02081/57.66, allocations: 2.016 MB / 14.66 GB, free: 415.1 MB / 1.265 GB Notification: Performance of sorting global known variables: time 0.1653/57.82, allocations: 68.84 MB / 14.73 GB, free: 346.7 MB / 1.265 GB Notification: Performance of sort global known variables: time 2.21e-07/57.82, allocations: 0 / 14.73 GB, free: 346.7 MB / 1.265 GB Notification: Performance of remove unused functions: time 0.7807/58.61, allocations: 34.63 MB / 14.76 GB, free: 461.1 MB / 1.265 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 2285 * Number of states: 250 (hemoglobin_titration9.state[1],hemoglobin_titration9.deoxyhemoglobin.state[1],hemoglobin_titration9.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration9.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration9.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration8.state[1],hemoglobin_titration8.deoxyhemoglobin.state[1],hemoglobin_titration8.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration8.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration8.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration7.state[1],hemoglobin_titration7.deoxyhemoglobin.state[1],hemoglobin_titration7.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration7.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration7.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration6.state[1],hemoglobin_titration6.deoxyhemoglobin.state[1],hemoglobin_titration6.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration6.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration6.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration5.state[1],hemoglobin_titration5.deoxyhemoglobin.state[1],hemoglobin_titration5.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration5.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration5.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration4.state[1],hemoglobin_titration4.deoxyhemoglobin.state[1],hemoglobin_titration4.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration4.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration4.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration3.state[1],hemoglobin_titration3.deoxyhemoglobin.state[1],hemoglobin_titration3.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration3.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration3.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration2.state[1],hemoglobin_titration2.deoxyhemoglobin.state[1],hemoglobin_titration2.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration2.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration2.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration1.state[1],hemoglobin_titration1.deoxyhemoglobin.state[1],hemoglobin_titration1.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration1.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration1.deoxyhemoglobin.R.Speciation.state[1],hemoglobin_titration.state[1],hemoglobin_titration.deoxyhemoglobin.state[1],hemoglobin_titration.deoxyhemoglobin.totalHb.state[1],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[11],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[10],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[9],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[8],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[7],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[6],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[5],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[4],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[3],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[2],hemoglobin_titration.deoxyhemoglobin.T.Speciation.state[1],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[11],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[10],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[9],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[8],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[7],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[6],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[5],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[4],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[3],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[2],hemoglobin_titration.deoxyhemoglobin.R.Speciation.state[1]) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (3285): * Single equations (assignments): 3265 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 20 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 10 {(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114,(26,11.2%) 114} * Non-linear torn systems: 10 {34 106,34 106,34 106,34 106,34 106,34 106,34 106,34 106,34 106,34 106} Notification: Performance of Backend phase and start with SimCode phase: time 0.01816/58.62, allocations: 2.651 MB / 14.76 GB, free: 460.6 MB / 1.265 GB Notification: Performance of simCode: created initialization part: time 0.4539/59.08, allocations: 223 MB / 14.98 GB, free: 425.4 MB / 1.265 GB Notification: Performance of simCode: created event and clocks part: time 0.0004356/59.08, allocations: 75.19 kB / 14.98 GB, free: 425.3 MB / 1.265 GB Notification: Performance of simCode: created simulation system equations: time 0.8769/59.95, allocations: 169.4 MB / 15.15 GB, free: 454.3 MB / 1.265 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.1379/60.09, allocations: 22.59 MB / 15.17 GB, free: 452.1 MB / 1.265 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 1.245/61.34, allocations: 262.4 MB / 15.43 GB, free: 415.3 MB / 1.265 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.1602/61.5, allocations: 61.27 MB / 15.49 GB, free: 410.9 MB / 1.265 GB Notification: Performance of simCode: alias equations: time 0.1155/61.61, allocations: 21.35 MB / 15.51 GB, free: 410.1 MB / 1.265 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.03259/61.65, allocations: 4.42 MB / 15.51 GB, free: 410.1 MB / 1.265 GB Notification: Performance of SimCode: time 1.012e-06/61.65, allocations: 0 / 15.51 GB, free: 410.1 MB / 1.265 GB Notification: Performance of Templates: time 8.539/70.18, allocations: 2.689 GB / 18.2 GB, free: 417.6 MB / 1.265 GB make -j1 -f Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.makefile Environment - environmentSimulation: (rm -f Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.pipe ; mkfifo Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.pipe >> ../files/Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.sim & ./Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts -abortSlowSimulation -alarm=480 -lv LOG_STATS > Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.Develop.Hemoglobin_titration_shifts.pipe 2>&1) Environment - environmentSimulation: