Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo", uses=false)
Using package BioChem with version 1.1.2 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
translateModel(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel,tolerance=1e-06,outputFormat="empty",numberOfIntervals=-2,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.001226/0.001226, allocations: 98.69 kB / 15.05 MB, free: 1.105 MB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001384/0.001384, allocations: 177.3 kB / 15.95 MB, free: 216 kB / 14.72 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.463/1.463, allocations: 223.2 MB / 239.9 MB, free: 5.383 MB / 190.1 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.2-master/package.mo): time 0.1939/0.1939, allocations: 12.24 MB / 303.2 MB, free: 2.148 MB / 238.1 MB
Warning: Ignoring unknown experiment annotation option: Algorithm = "dassl"
Notification: Performance of FrontEnd - loaded program: time 0.0003567/0.0003567, allocations: 8 kB / 366.8 MB, free: 9.871 MB / 302.1 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1245/0.1248, allocations: 53.09 MB / 419.9 MB, free: 4.668 MB / 350.1 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel): time 0.2343/0.3592, allocations: 7.059 MB / 427 MB, free: 34.64 MB / 350.1 MB
Notification: Performance of NFInst.instExpressions: time 0.005352/0.3646, allocations: 2.471 MB / 429.4 MB, free: 34.21 MB / 350.1 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001237/0.3659, allocations: 121.8 kB / 429.6 MB, free: 34.21 MB / 350.1 MB
Notification: Performance of NFTyping.typeComponents: time 0.0008154/0.3667, allocations: 302.7 kB / 429.9 MB, free: 34.11 MB / 350.1 MB
Notification: Performance of NFTyping.typeBindings: time 0.001273/0.368, allocations: 0.521 MB / 430.4 MB, free: 34.1 MB / 350.1 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0009631/0.3689, allocations: 330 kB / 430.7 MB, free: 34.1 MB / 350.1 MB
Notification: Performance of NFFlatten.flatten: time 0.001915/0.3709, allocations: 1.477 MB / 432.2 MB, free: 34.02 MB / 350.1 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001289/0.3722, allocations: 0.9836 MB / 433.2 MB, free: 33.91 MB / 350.1 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001127/0.3733, allocations: 0.657 MB / 433.8 MB, free: 33.77 MB / 350.1 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0008365/0.3741, allocations: 0.797 MB / 434.6 MB, free: 33.38 MB / 350.1 MB
Notification: Performance of NFPackage.collectConstants: time 0.0001851/0.3743, allocations: 113.3 kB / 434.7 MB, free: 33.38 MB / 350.1 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002365/0.3746, allocations: 110.8 kB / 434.8 MB, free: 33.38 MB / 350.1 MB
Notification: Performance of NFScalarize.scalarize: time 0.0002386/0.3748, allocations: 348.8 kB / 435.2 MB, free: 33.18 MB / 350.1 MB
Notification: Performance of NFVerifyModel.verify: time 0.0003679/0.3752, allocations: 448.8 kB / 435.6 MB, free: 32.91 MB / 350.1 MB
Notification: Performance of NFConvertDAE.convert: time 0.001884/0.3771, allocations: 2.682 MB / 438.3 MB, free: 32.42 MB / 350.1 MB
Notification: Performance of FrontEnd - DAE generated: time 3.737e-06/0.3771, allocations: 0.875 kB / 438.3 MB, free: 32.42 MB / 350.1 MB
Notification: Performance of FrontEnd: time 1.704e-06/0.3771, allocations: 0 / 438.3 MB, free: 32.42 MB / 350.1 MB
Notification: Performance of Transformations before backend: time 4.317e-05/0.3772, allocations: 0 / 438.3 MB, free: 32.42 MB / 350.1 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 687
 * Number of variables: 687
Notification: Performance of Generate backend data structure: time 0.003152/0.3803, allocations: 1.934 MB / 440.2 MB, free: 31.33 MB / 350.1 MB
Notification: Performance of prepare preOptimizeDAE: time 4.058e-05/0.3804, allocations: 13.78 kB / 440.2 MB, free: 31.33 MB / 350.1 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002791/0.3807, allocations: 230.7 kB / 440.5 MB, free: 31.21 MB / 350.1 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0002735/0.3809, allocations: 410.7 kB / 440.9 MB, free: 30.84 MB / 350.1 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001888/0.3811, allocations: 260.4 kB / 441.1 MB, free: 30.69 MB / 350.1 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002579/0.3814, allocations: 285.9 kB / 441.4 MB, free: 30.59 MB / 350.1 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003337/0.3847, allocations: 2.356 MB / 443.8 MB, free: 29.51 MB / 350.1 MB
Notification: Performance of preOpt findStateOrder (simulation): time 6.292e-05/0.3848, allocations: 5.906 kB / 443.8 MB, free: 29.51 MB / 350.1 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001578/0.385, allocations: 112.2 kB / 443.9 MB, free: 29.43 MB / 350.1 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 4.194e-05/0.385, allocations: 65.72 kB / 443.9 MB, free: 29.43 MB / 350.1 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.002747/0.3878, allocations: 1.676 MB / 445.6 MB, free: 28.81 MB / 350.1 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01058/0.3984, allocations: 8.441 MB / 454 MB, free: 23.74 MB / 350.1 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001813/0.4002, allocations: 1.587 MB / 455.6 MB, free: 22.72 MB / 350.1 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.004e-05/0.4003, allocations: 17.94 kB / 455.7 MB, free: 22.72 MB / 350.1 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.413e-05/0.4003, allocations: 59.33 kB / 455.7 MB, free: 22.66 MB / 350.1 MB
Notification: Performance of pre-optimization done (n=139): time 3.025e-06/0.4003, allocations: 0 / 455.7 MB, free: 22.66 MB / 350.1 MB
Notification: Performance of matching and sorting (n=171): time 0.0243/0.4246, allocations: 9.227 MB / 464.9 MB, free: 19.24 MB / 350.1 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 8.227e-05/0.4248, allocations: 180.3 kB / 465.1 MB, free: 19.04 MB / 350.1 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0005873/0.4253, allocations: 486.7 kB / 465.6 MB, free: 18.8 MB / 350.1 MB
Notification: Performance of collectPreVariables (initialization): time 8.116e-05/0.4254, allocations: 55.2 kB / 465.6 MB, free: 18.74 MB / 350.1 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0004644/0.4259, allocations: 0.9468 MB / 466.6 MB, free: 18.02 MB / 350.1 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003907/0.4263, allocations: 0.6341 MB / 467.2 MB, free: 17.52 MB / 350.1 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 7.165e-05/0.4264, allocations: 36.31 kB / 467.3 MB, free: 17.5 MB / 350.1 MB
Notification: Performance of setup shared object (initialization): time 0.000139/0.4265, allocations: 409.4 kB / 467.7 MB, free: 17.14 MB / 350.1 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.001171/0.4277, allocations: 0.6608 MB / 468.3 MB, free: 16.87 MB / 350.1 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.001557/0.4293, allocations: 1.175 MB / 469.5 MB, free: 15.87 MB / 350.1 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.00156/0.4309, allocations: 0.8635 MB / 470.4 MB, free: 15.4 MB / 350.1 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.323e-05/0.4309, allocations: 6.031 kB / 470.4 MB, free: 15.4 MB / 350.1 MB
Notification: Performance of matching and sorting (n=291) (initialization): time 0.003859/0.4347, allocations: 2.116 MB / 472.5 MB, free: 14.48 MB / 350.1 MB
Notification: Performance of prepare postOptimizeDAE: time 3.948e-05/0.4348, allocations: 12.84 kB / 472.5 MB, free: 14.48 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.909e-05/0.4348, allocations: 20.31 kB / 472.5 MB, free: 14.48 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (initialization): time 5.057e-05/0.4349, allocations: 33.44 kB / 472.5 MB, free: 14.48 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.00273/0.4376, allocations: 0.6479 MB / 473.2 MB, free: 14.42 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 6.659e-05/0.4377, allocations: 42.67 kB / 473.2 MB, free: 14.41 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001264/0.439, allocations: 156.3 kB / 473.4 MB, free: 14.35 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001366/0.4391, allocations: 92.83 kB / 473.5 MB, free: 14.33 MB / 350.1 MB
Warning: Assuming fixed start value for the following 41 variables:
         adiposeTissue1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GlucoseRenalExcretion.E.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GlucoseRenalExcretion.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         UtilizationMuscleTissue.U_idm.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         adiposeTissue1.adipocyte1.IR_insulin.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 580000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.GlucoseUtilization.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.PKB.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16800000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IRS1_P.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         adiposeTissue1.adipocyte1.IRS1.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 16100000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.IR.c:VARIABLE(min = max(0.0, max(0.0, 0.0)) start = 2340000000000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         adiposeTissue1.adipocyte1.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         BetaCell.Y.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))) start = 0.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         BetaCell.G_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         BetaCell.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         EndogenousGlucoseProduction.I_po.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0))))))))) start = 3.6 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         EndogenousGlucoseProduction.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_d.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.I_1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         EndogenousGlucoseProduction.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         LiverInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.I_l.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         LiverInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         GastroIntestinalTract.Q_sto2.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_gut.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.Q_sto1.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         GastroIntestinalTract.GlucoseIntake.c:VARIABLE(min = max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, max(0.0, 0.0)))))) start = 78000.0 unit = "mol/l" fixed = true stateSelect=StateSelect.prefer )  "Current concentration of substance (mM)" type: Real
         GastroIntestinalTract.End.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         TissueGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         TissueGlucose.G_t.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaGlucose.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaGlucose.U_ii.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.V:VARIABLE(start = 1.0 fixed = true stateSelect=StateSelect.prefer )  "Compartment volume" type: Real
         PlasmaInsulin.I_p.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         PlasmaInsulin.Deg.n:VARIABLE(min = 0.0 unit = "mol" fixed = true stateSelect=StateSelect.prefer )  "Number of moles of substance in pool (mol)" type: Real
         UtilizationMuscleTissue.UtilizationReaction.X:VARIABLE(min = 0.0 unit = "mol/l" fixed = true )  type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 86
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (291):
 * Single equations (assignments): 291
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.001418/0.4405, allocations: 0.6571 MB / 474.1 MB, free: 13.9 MB / 350.1 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003042/0.4409, allocations: 95.7 kB / 474.2 MB, free: 13.86 MB / 350.1 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002657/0.4435, allocations: 1.445 MB / 475.7 MB, free: 13.21 MB / 350.1 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.995e-05/0.4436, allocations: 17.7 kB / 475.7 MB, free: 13.21 MB / 350.1 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.021e-05/0.4436, allocations: 1.094 kB / 475.7 MB, free: 13.21 MB / 350.1 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.207e-05/0.4436, allocations: 10.31 kB / 475.7 MB, free: 13.21 MB / 350.1 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.007459/0.4511, allocations: 3.611 MB / 479.3 MB, free: 11.58 MB / 350.1 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.023e-05/0.4511, allocations: 2.312 kB / 479.3 MB, free: 11.58 MB / 350.1 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.002632/0.4537, allocations: 493.7 kB / 479.8 MB, free: 11.54 MB / 350.1 MB
Notification: Performance of postOpt tearingSystem (simulation): time 1.959e-05/0.4538, allocations: 7.75 kB / 479.8 MB, free: 11.54 MB / 350.1 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001404/0.4539, allocations: 58.78 kB / 479.9 MB, free: 11.51 MB / 350.1 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.611e-05/0.4539, allocations: 8.641 kB / 479.9 MB, free: 11.51 MB / 350.1 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.827e-06/0.4539, allocations: 1.312 kB / 479.9 MB, free: 11.51 MB / 350.1 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.004061/0.458, allocations: 2.598 MB / 482.5 MB, free: 10.07 MB / 350.1 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0003927/0.4584, allocations: 158.3 kB / 482.6 MB, free: 9.93 MB / 350.1 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001629/0.4586, allocations: 43.78 kB / 482.7 MB, free: 9.902 MB / 350.1 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0009146/0.4595, allocations: 113.1 kB / 482.8 MB, free: 9.855 MB / 350.1 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002366/0.4598, allocations: 106.3 kB / 482.9 MB, free: 9.844 MB / 350.1 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001066/0.4599, allocations: 52.59 kB / 482.9 MB, free: 9.832 MB / 350.1 MB
Notification: Performance of sorting global known variables: time 0.0004419/0.4603, allocations: 292.6 kB / 483.2 MB, free: 9.684 MB / 350.1 MB
Notification: Performance of sort global known variables: time 1.21e-07/0.4603, allocations: 1.312 kB / 483.2 MB, free: 9.684 MB / 350.1 MB
Notification: Performance of remove unused functions: time 0.002204/0.4625, allocations: 423.7 kB / 483.6 MB, free: 9.629 MB / 350.1 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 7
 * Number of states: 41 (GastroIntestinalTract.V,GastroIntestinalTract.Q_sto2.n,GastroIntestinalTract.Q_gut.n,GastroIntestinalTract.Q_sto1.n,GastroIntestinalTract.GlucoseIntake.c,GastroIntestinalTract.End.n,TissueGlucose.V,TissueGlucose.G_t.n,PlasmaGlucose.V,PlasmaGlucose.U_ii.n,PlasmaInsulin.V,PlasmaInsulin.I_p.n,PlasmaInsulin.Deg.n,UtilizationMuscleTissue.UtilizationReaction.X,LiverInsulin.V,LiverInsulin.I_l.n,LiverInsulin.Deg.n,EndogenousGlucoseProduction.V,EndogenousGlucoseProduction.I_1.n,EndogenousGlucoseProduction.I_d.n,EndogenousGlucoseProduction.End.n,EndogenousGlucoseProduction.I_po.c,BetaCell.V,BetaCell.G_p.n,BetaCell.Y.c,adiposeTissue1.adipocyte1.V,adiposeTissue1.adipocyte1.IR.c,adiposeTissue1.adipocyte1.IRS1.c,adiposeTissue1.adipocyte1.IRS1_P.n,adiposeTissue1.adipocyte1.PKB.c,adiposeTissue1.adipocyte1.PKB_P.n,adiposeTissue1.adipocyte1.GlucoseUtilization.n,adiposeTissue1.adipocyte1.GLUT4_MEMBRANE.n,adiposeTissue1.adipocyte1.GLUT4_CYTOSOL.c,adiposeTissue1.adipocyte1.IR_insulin.n,V,adiposeTissue1.V,UtilizationMuscleTissue.V,UtilizationMuscleTissue.U_idm.n,GlucoseRenalExcretion.V,GlucoseRenalExcretion.E.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (173):
 * Single equations (assignments): 173
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0002191/0.4628, allocations: 169.7 kB / 483.8 MB, free: 9.484 MB / 350.1 MB
Notification: Performance of simCode: created initialization part: time 0.002905/0.4657, allocations: 1.652 MB / 485.5 MB, free: 8.887 MB / 350.1 MB
Notification: Performance of simCode: created event and clocks part: time 3.687e-06/0.4657, allocations: 0 / 485.5 MB, free: 8.887 MB / 350.1 MB
Notification: Performance of simCode: created simulation system equations: time 0.001127/0.4668, allocations: 0.7566 MB / 486.2 MB, free: 8.617 MB / 350.1 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008383/0.4677, allocations: 192.2 kB / 486.4 MB, free: 8.543 MB / 350.1 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008005/0.4757, allocations: 6.14 MB / 492.5 MB, free: 3.887 MB / 350.1 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0009098/0.4766, allocations: 1.411 MB / 493.9 MB, free: 2.711 MB / 350.1 MB
Notification: Performance of simCode: alias equations: time 0.0009106/0.4775, allocations: 158.5 kB / 494.1 MB, free: 2.594 MB / 350.1 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003351/0.4779, allocations: 110.2 kB / 494.2 MB, free: 2.5 MB / 350.1 MB
Notification: Performance of SimCode: time 8.71e-07/0.4779, allocations: 3.938 kB / 494.2 MB, free: 2.496 MB / 350.1 MB
Notification: Performance of Templates: time 0.02326/0.5011, allocations: 14.52 MB / 0.4968 GB, free: 4.332 MB / 366.1 MB
make -j1 -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.makefile
Environment - environmentSimulation:
(rm -f BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; mkfifo BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe ; head -c 1048576 < BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe >> ../files/BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.sim & ./BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel  -abortSlowSimulation -alarm=480 -lv LOG_STATS > BioChem_BioChem.Examples.GlucoseInsulinModel.GlucoseInsulinModel.pipe 2>&1)
Environment - environmentSimulation: