[1] Matej?k M, Kulh?nek T, Matouaek S. Adair-Based Hemoglobin...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/Chemical.mo:1632:61-1632:133:writable] Warning: The file was not encoded in UTF-8: "
Before silumation in "Dymola 2014 FD01" please set e...". Defaulting to 7-bit ASCII with unknown characters replaced by '?'. To change encoding when loading a file: loadFile(encoding="ISO-XXXX-YY"). To change it in a package: add a file package.encoding at the top-level. Note: The Modelica Language Specification only allows files encoded in UTF-8. Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 2.3.1/package.mo): time 0.07181/0.07181, allocations: 15.4 MB / 285.8 MB, free: 5.781 MB / 238.1 MB Notification: Modelica requested package Complex of version 3.2.3. Complex 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Modelica requested package ModelicaServices of version 3.2.3. ModelicaServices 4.0.0 is used instead which states that it is fully compatible without conversion script needed. Notification: Physiolibrary requested package Modelica of version 3.2.1. Modelica 3.2.3 is used instead which states that it is fully compatible without conversion script needed. Notification: Performance of FrontEnd - loaded program: time 0.0005125/0.0005126, allocations: 20 kB / 347.8 MB, free: 18.08 MB / 254.1 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.07578/0.0763, allocations: 51.4 MB / 399.2 MB, free: 14.56 MB / 302.1 MB Notification: Performance of NFInst.instantiate(Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation): time 0.00551/0.08185, allocations: 5.853 MB / 405 MB, free: 8.688 MB / 302.1 MB Notification: Performance of NFInst.instExpressions: time 0.01371/0.09559, allocations: 11.13 MB / 416.1 MB, free: 13.53 MB / 318.1 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.0007187/0.09634, allocations: 39.62 kB / 416.2 MB, free: 13.49 MB / 318.1 MB Notification: Performance of NFTyping.typeComponents: time 0.0002336/0.09658, allocations: 126.9 kB / 416.3 MB, free: 13.37 MB / 318.1 MB Notification: Performance of NFTyping.typeBindings: time 0.003496/0.1001, allocations: 1.569 MB / 417.9 MB, free: 11.79 MB / 318.1 MB Notification: Performance of NFTyping.typeClassSections: time 0.003713/0.1038, allocations: 1.633 MB / 419.5 MB, free: 10.16 MB / 318.1 MB Notification: Performance of NFFlatten.flatten: time 0.001524/0.1053, allocations: 1.213 MB / 420.7 MB, free: 8.941 MB / 318.1 MB Notification: Performance of NFFlatten.resolveConnections: time 0.0003604/0.1057, allocations: 253.8 kB / 421 MB, free: 8.676 MB / 318.1 MB Notification: Performance of NFEvalConstants.evaluate: time 0.0005192/0.1062, allocations: 494.2 kB / 421.5 MB, free: 8.191 MB / 318.1 MB Notification: Performance of NFSimplifyModel.simplify: time 0.0005998/0.1069, allocations: 0.5639 MB / 422 MB, free: 7.625 MB / 318.1 MB Notification: Performance of NFPackage.collectConstants: time 8.794e-05/0.107, allocations: 48 kB / 422.1 MB, free: 7.578 MB / 318.1 MB Notification: Performance of NFFlatten.collectFunctions: time 0.0001319/0.1071, allocations: 52 kB / 422.1 MB, free: 7.527 MB / 318.1 MB Notification: Performance of NFScalarize.scalarize: time 0.0001539/0.1073, allocations: 191.1 kB / 422.3 MB, free: 7.34 MB / 318.1 MB Notification: Performance of NFVerifyModel.verify: time 0.0002136/0.1075, allocations: 281 kB / 422.6 MB, free: 7.059 MB / 318.1 MB Notification: Performance of NFConvertDAE.convert: time 0.0008043/0.1083, allocations: 0.8726 MB / 423.4 MB, free: 6.184 MB / 318.1 MB Notification: Performance of FrontEnd - DAE generated: time 2.534e-06/0.1083, allocations: 3.938 kB / 423.5 MB, free: 6.18 MB / 318.1 MB Notification: Performance of FrontEnd: time 1.843e-06/0.1083, allocations: 0 / 423.5 MB, free: 6.18 MB / 318.1 MB Notification: Performance of Transformations before backend: time 1.288e-05/0.1083, allocations: 3.938 kB / 423.5 MB, free: 6.176 MB / 318.1 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 209 * Number of variables: 209 Notification: Performance of Generate backend data structure: time 0.002274/0.1106, allocations: 1.409 MB / 424.9 MB, free: 4.715 MB / 318.1 MB Notification: Performance of prepare preOptimizeDAE: time 3.41e-05/0.1106, allocations: 8.031 kB / 424.9 MB, free: 4.707 MB / 318.1 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.0001359/0.1108, allocations: 135.1 kB / 425 MB, free: 4.566 MB / 318.1 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001647/0.111, allocations: 138.3 kB / 425.1 MB, free: 4.43 MB / 318.1 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.00107/0.112, allocations: 0.7289 MB / 425.9 MB, free: 3.645 MB / 318.1 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001653/0.1122, allocations: 133.2 kB / 426 MB, free: 3.5 MB / 318.1 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001146/0.1123, allocations: 96 kB / 426.1 MB, free: 3.406 MB / 318.1 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.001282/0.1136, allocations: 0.7608 MB / 426.9 MB, free: 2.641 MB / 318.1 MB Notification: Performance of preOpt findStateOrder (simulation): time 2.602e-05/0.1137, allocations: 7.906 kB / 426.9 MB, free: 2.633 MB / 318.1 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.165e-05/0.1137, allocations: 32 kB / 426.9 MB, free: 2.602 MB / 318.1 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.519e-05/0.1138, allocations: 20 kB / 426.9 MB, free: 2.582 MB / 318.1 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001542/0.1153, allocations: 0.7457 MB / 427.7 MB, free: 1.836 MB / 318.1 MB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1426/0.2579, allocations: 2.225 MB / 429.9 MB, free: 17.34 MB / 318.1 MB Notification: Performance of preOpt comSubExp (simulation): time 0.001492/0.2594, allocations: 0.8123 MB / 430.7 MB, free: 17.31 MB / 318.1 MB Notification: Performance of preOpt evalFunc (simulation): time 5.427e-05/0.2595, allocations: 16.44 kB / 430.7 MB, free: 17.31 MB / 318.1 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0008016/0.2603, allocations: 442.1 kB / 431.1 MB, free: 17.25 MB / 318.1 MB Notification: Performance of pre-optimization done (n=90): time 2.895e-06/0.2603, allocations: 1.156 kB / 431.1 MB, free: 17.25 MB / 318.1 MB Notification: Performance of matching and sorting (n=90): time 0.003304/0.2636, allocations: 1.647 MB / 432.8 MB, free: 16.78 MB / 318.1 MB Notification: Performance of inlineWhenForInitialization (initialization): time 3.263e-05/0.2637, allocations: 68.91 kB / 432.9 MB, free: 16.71 MB / 318.1 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0008686/0.2645, allocations: 0.8276 MB / 433.7 MB, free: 16.57 MB / 318.1 MB Notification: Performance of collectPreVariables (initialization): time 5.513e-05/0.2646, allocations: 47.94 kB / 433.7 MB, free: 16.54 MB / 318.1 MB Notification: Performance of collectInitialEqns (initialization): time 0.0002519/0.2649, allocations: 455.9 kB / 434.2 MB, free: 16.45 MB / 318.1 MB Notification: Performance of collectInitialBindings (initialization): time 0.000187/0.265, allocations: 303.5 kB / 434.5 MB, free: 16.29 MB / 318.1 MB Notification: Performance of simplifyInitialFunctions (initialization): time 3.569e-05/0.2651, allocations: 21.12 kB / 434.5 MB, free: 16.29 MB / 318.1 MB Notification: Performance of setup shared object (initialization): time 7.323e-05/0.2652, allocations: 346.1 kB / 434.8 MB, free: 15.98 MB / 318.1 MB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0006063/0.2658, allocations: 308.5 kB / 435.1 MB, free: 15.98 MB / 318.1 MB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006919/0.2665, allocations: 465 kB / 435.6 MB, free: 15.84 MB / 318.1 MB Notification: Performance of analyzeInitialSystem (initialization): time 0.0006455/0.2671, allocations: 357.2 kB / 435.9 MB, free: 15.81 MB / 318.1 MB Notification: Performance of solveInitialSystemEqSystem (initialization): time 4.498e-06/0.2672, allocations: 1 kB / 435.9 MB, free: 15.81 MB / 318.1 MB Notification: Performance of matching and sorting (n=132) (initialization): time 0.001886/0.269, allocations: 1.109 MB / 437 MB, free: 15.66 MB / 318.1 MB Notification: Performance of prepare postOptimizeDAE: time 1.894e-05/0.2691, allocations: 8.625 kB / 437.1 MB, free: 15.66 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.034e-05/0.2691, allocations: 7.578 kB / 437.1 MB, free: 15.65 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (initialization): time 0.000397/0.2695, allocations: 132.9 kB / 437.2 MB, free: 15.62 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0008318/0.2703, allocations: 236.4 kB / 437.4 MB, free: 15.62 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.003027/0.2734, allocations: 5.78 MB / 443.2 MB, free: 10.27 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0006381/0.274, allocations: 134.2 kB / 443.3 MB, free: 10.21 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 6.528e-05/0.2741, allocations: 39.72 kB / 443.4 MB, free: 10.21 MB / 318.1 MB Warning: Assuming fixed start value for the following 6 variables: timeVaryingElastanceRight.ts:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "duration of systole" type: Real timeVaryingElastanceRight.t0:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "time of beginning of the cardiac cycle" type: Real timeVaryingElastanceLeft.HP:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "heart period" type: Real timeVaryingElastanceLeft.t0:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "time of beginning of the cardiac cycle" type: Real timeVaryingElastanceLeft.ts:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "duration of systole" type: Real timeVaryingElastanceRight.HP:DISCRETE(unit = "s" fixed = true nominal = 60.0 ) "heart period" type: Real Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 17 * Number of states: 0 () * Number of discrete variables: 18 ($whenCondition2,$whenCondition1,mitralValve.open,aorticValve.open,tricuspidValve.open,pulmonaryValve.open,$PRE.timeVaryingElastanceLeft.HP,$PRE.timeVaryingElastanceLeft.t0,$PRE.timeVaryingElastanceLeft.ts,$PRE.timeVaryingElastanceRight.HP,$PRE.timeVaryingElastanceRight.t0,$PRE.timeVaryingElastanceRight.ts,timeVaryingElastanceRight.t0,timeVaryingElastanceRight.HP,timeVaryingElastanceRight.ts,timeVaryingElastanceLeft.t0,timeVaryingElastanceLeft.HP,timeVaryingElastanceLeft.ts) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (120): * Single equations (assignments): 116 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 0 * Non-linear torn systems: 4 {1 1,1 5,1 5,1 1} Notification: Performance of prepare postOptimizeDAE: time 0.0003663/0.2745, allocations: 266 kB / 443.6 MB, free: 10.07 MB / 318.1 MB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.000108/0.2746, allocations: 109.9 kB / 443.7 MB, free: 10.02 MB / 318.1 MB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.001806/0.2764, allocations: 0.9941 MB / 444.7 MB, free: 9.883 MB / 318.1 MB Notification: Performance of postOpt inlineArrayEqn (simulation): time 7.234e-06/0.2764, allocations: 8.438 kB / 444.7 MB, free: 9.883 MB / 318.1 MB Notification: Performance of postOpt constantLinearSystem (simulation): time 2.404e-06/0.2764, allocations: 0 / 444.7 MB, free: 9.883 MB / 318.1 MB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.119e-05/0.2764, allocations: 9.766 kB / 444.8 MB, free: 9.879 MB / 318.1 MB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.000965/0.2774, allocations: 0.8611 MB / 445.6 MB, free: 9.668 MB / 318.1 MB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.897e-06/0.2774, allocations: 5.109 kB / 445.6 MB, free: 9.664 MB / 318.1 MB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0007183/0.2782, allocations: 160 kB / 445.8 MB, free: 9.664 MB / 318.1 MB Notification: Performance of postOpt tearingSystem (simulation): time 0.000344/0.2785, allocations: 126.5 kB / 445.9 MB, free: 9.629 MB / 318.1 MB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.052e-05/0.2786, allocations: 26.27 kB / 445.9 MB, free: 9.629 MB / 318.1 MB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.002917/0.2815, allocations: 5.768 MB / 451.7 MB, free: 4.281 MB / 318.1 MB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.093e-06/0.2815, allocations: 5.078 kB / 451.7 MB, free: 4.277 MB / 318.1 MB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00229/0.2838, allocations: 1.363 MB / 453.1 MB, free: 4.062 MB / 318.1 MB Notification: Performance of postOpt removeConstants (simulation): time 0.0003001/0.2841, allocations: 255.1 kB / 453.3 MB, free: 3.895 MB / 318.1 MB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001155/0.2842, allocations: 19.05 kB / 453.3 MB, free: 3.895 MB / 318.1 MB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0004633/0.2847, allocations: 54.03 kB / 453.4 MB, free: 3.895 MB / 318.1 MB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001118/0.2848, allocations: 69.14 kB / 453.4 MB, free: 3.887 MB / 318.1 MB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 5.493e-05/0.2849, allocations: 32.78 kB / 453.5 MB, free: 3.887 MB / 318.1 MB Notification: Performance of sorting global known variables: time 0.0005902/0.2855, allocations: 0.5389 MB / 454 MB, free: 3.777 MB / 318.1 MB Notification: Performance of sort global known variables: time 1.9e-07/0.2855, allocations: 0 / 454 MB, free: 3.777 MB / 318.1 MB Notification: Performance of remove unused functions: time 0.0009964/0.2865, allocations: 309.9 kB / 454.3 MB, free: 3.754 MB / 318.1 MB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 12 (pulmonaryVeinsInertia.state,pulmonaryArterialInertia.state,pulmonaryVeins.state,leftVentricle.state,aorta.state,aorticInertia.state,arteries.state,systemicInertia.state,rightVentricle.state,pulmonaryArtery.state,pulmonaryArterioles.state,veins.state) * Number of discrete variables: 12 ($whenCondition2,$whenCondition1,mitralValve.open,aorticValve.open,tricuspidValve.open,pulmonaryValve.open,timeVaryingElastanceLeft.HP,timeVaryingElastanceLeft.t0,timeVaryingElastanceLeft.ts,timeVaryingElastanceRight.HP,timeVaryingElastanceRight.t0,timeVaryingElastanceRight.ts) * Number of discrete states: 6 (timeVaryingElastanceRight.ts,timeVaryingElastanceRight.t0,timeVaryingElastanceLeft.ts,timeVaryingElastanceLeft.t0,timeVaryingElastanceLeft.HP,timeVaryingElastanceRight.HP) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (78): * Single equations (assignments): 68 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 0 * Non-linear torn systems: 4 {1 1,1 5,1 1,1 5} Notification: Performance of Backend phase and start with SimCode phase: time 0.002321/0.2888, allocations: 1.93 MB / 456.3 MB, free: 3.016 MB / 318.1 MB Notification: Performance of simCode: created initialization part: time 0.001723/0.2906, allocations: 1.275 MB / 457.5 MB, free: 2.535 MB / 318.1 MB Notification: Performance of simCode: created event and clocks part: time 2.164e-06/0.2906, allocations: 1.562 kB / 457.5 MB, free: 2.535 MB / 318.1 MB Notification: Performance of simCode: created simulation system equations: time 0.0009419/0.2915, allocations: 0.8851 MB / 458.4 MB, free: 2.086 MB / 318.1 MB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.000802/0.2923, allocations: 242.9 kB / 458.7 MB, free: 2.062 MB / 318.1 MB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003466/0.2958, allocations: 5.431 MB / 464.1 MB, free: 14 MB / 334.1 MB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004867/0.2963, allocations: 1.101 MB / 465.2 MB, free: 13.28 MB / 334.1 MB Notification: Performance of simCode: alias equations: time 0.0003995/0.2967, allocations: 131.3 kB / 465.3 MB, free: 13.25 MB / 334.1 MB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003865/0.2971, allocations: 430 kB / 465.7 MB, free: 13.25 MB / 334.1 MB Notification: Performance of SimCode: time 3.41e-07/0.2971, allocations: 0 / 465.7 MB, free: 13.25 MB / 334.1 MB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.03373/0.3309, allocations: 21.6 MB / 487.3 MB, free: 10.4 MB / 350.1 MB Notification: Performance of buildModelFMU: configured platform static using cached values: time 0.0001527/0.331, allocations: 237.2 kB / 487.6 MB, free: 10.15 MB / 350.1 MB Notification: Performance of buildModelFMU: Generate platform static: time 2.235/2.566, allocations: 0 / 487.6 MB, free: 10.15 MB / 350.1 MB (rm -f Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe ; mkfifo Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe >> ../files/Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.sim & /home/hudson/saved_omc/OMSimulator/install/linux/bin/OMSimulator --tempDir=temp_Physiolibrary_Physiolibrary_Hydraulic_Examples_Fernandez2013_PulsatileCirculation_fmu --startTime=0 --stopTime=5 --timeout=50 --tolerance=1e-06 Physiolibrary_Physiolibrary_Hydraulic_Examples_Fernandez2013_PulsatileCirculation.fmu > Physiolibrary_Physiolibrary.Hydraulic.Examples.Fernandez2013.PulsatileCirculation.pipe 2>&1) Environment - environmentSimulation: