Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinMultipleAllostery.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo", uses=false) Using package Physiolibrary with version 3.0.0-beta1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Running command: translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinMultipleAllostery") translateModel(Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinMultipleAllostery") Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.007682/0.007682, allocations: 170.5 kB / 15.11 MB, free: 5.969 MB / 13.93 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.413/1.413, allocations: 223.2 MB / 239 MB, free: 1.77 MB / 186.7 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0009284/0.0009286, allocations: 94.39 kB / 290.2 MB, free: 13.95 MB / 234.7 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo): time 0.289/0.289, allocations: 37.07 MB / 378.4 MB, free: 5.711 MB / 314.7 MB Notification: Performance of FrontEnd - loaded program: time 0.0004476/0.0004476, allocations: 8 kB / 449 MB, free: 61.68 MB / 330.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.1293/0.1297, allocations: 60.08 MB / 0.4971 GB, free: 1.547 MB / 330.7 MB Notification: Performance of FrontEnd - scodeFlatten: time 0.481/0.6108, allocations: 119.1 MB / 0.6134 GB, free: 2.867 MB / 410.7 MB Notification: Performance of FrontEnd - mkProgramGraph: time 0.0002373/0.611, allocations: 77.75 kB / 0.6135 GB, free: 2.828 MB / 410.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4722:7-4722:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System solution.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Components.Solution$solution. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:3037:6-3037:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_in_air.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Sources.ExternalIdealGasSubstance$oxygen_in_air. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:2844:5-2845:38:writable] Notification: From here: [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:5124:5-5125:53:writable] Error: Duplicate elements (due to inherited elements) not identical: first element is: flow Modelica.Units.SI.MolarFlowRate q "Molar change of the substance" second element is: flow .Real q "Change of the substance in nonspecific units" Error: Error occurred while flattening model Physiolibrary.Chemical.Examples.Hemoglobin.HemoglobinMultipleAllostery Notification: Performance of FrontEnd: time 0.01487/0.6259, allocations: 6.244 MB / 0.6196 GB, free: 13.72 MB / 426.7 MB