Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo)
Running command: translateModel(Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC")
translateModel(Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo): time 0.08637/0.08637, allocations: 15.26 MB / 30.21 MB, free: 3.293 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001008/0.001008, allocations: 177.2 kB / 35.29 MB, free: 2.379 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.371/1.371, allocations: 223.2 MB / 263.4 MB, free: 6.91 MB / 202.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.00084/0.0008401, allocations: 96.31 kB / 318.8 MB, free: 3.859 MB / 250.7 MB
Notification: Performance of FrontEnd - loaded program: time 0.0002899/0.00029, allocations: 11.62 kB / 383.9 MB, free: 50.44 MB / 298.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.09004/0.09035, allocations: 54.64 MB / 438.6 MB, free: 500 kB / 298.7 MB
Notification: Performance of FrontEnd - scodeFlatten: time 0.4299/0.5203, allocations: 105.9 MB / 0.5317 GB, free: 15.67 MB / 378.7 MB
Notification: Performance of FrontEnd - mkProgramGraph: time 0.0002785/0.5206, allocations: 79.44 kB / 0.5318 GB, free: 15.67 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System solution.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Solution.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_in_air.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalIdealGasSubstance$oxygen_in_air.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2O.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_unbound.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$oxygen_unbound.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[4].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[3].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[2].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[1].system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
Notification: Performance of FrontEnd - DAE generated: time 0.3699/0.8906, allocations: 145.6 MB / 0.674 GB, free: 8.914 MB / 474.7 MB
Notification: Performance of FrontEnd: time 2.555e-06/0.8906, allocations: 0 / 0.674 GB, free: 8.914 MB / 474.7 MB
Notification: Performance of Transformations before backend: time 0.0004176/0.891, allocations: 111.9 kB / 0.6741 GB, free: 8.805 MB / 474.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 1226
 * Number of variables: 1226
Notification: Performance of Generate backend data structure: time 0.02067/0.9117, allocations: 6.345 MB / 0.6803 GB, free: 2.379 MB / 474.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.406e-05/0.9118, allocations: 12.03 kB / 0.6803 GB, free: 2.367 MB / 474.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.006924/0.9187, allocations: 1.486 MB / 0.6817 GB, free: 0.8711 MB / 474.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.2591/1.178, allocations: 4.613 MB / 0.6862 GB, free: 58.98 MB / 474.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0006765/1.179, allocations: 0.6735 MB / 0.6869 GB, free: 58.63 MB / 474.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.002246/1.181, allocations: 0.4905 MB / 0.6874 GB, free: 58.63 MB / 474.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.02469/1.206, allocations: 12.51 MB / 0.6996 GB, free: 58.26 MB / 474.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 0.0001671/1.206, allocations: 2.875 kB / 0.6996 GB, free: 58.26 MB / 474.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.001301/1.207, allocations: 195.9 kB / 0.6998 GB, free: 58.26 MB / 474.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0001303/1.207, allocations: 115.8 kB / 0.6999 GB, free: 58.26 MB / 474.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.02712/1.234, allocations: 19.14 MB / 0.7186 GB, free: 58.21 MB / 474.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.07892/1.313, allocations: 41.79 MB / 0.7594 GB, free: 46.99 MB / 474.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0813/1.395, allocations: 32.65 MB / 0.7913 GB, free: 37.45 MB / 474.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.001411/1.396, allocations: 0.6609 MB / 0.7919 GB, free: 36.93 MB / 474.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001112/1.396, allocations: 97.77 kB / 0.792 GB, free: 36.83 MB / 474.7 MB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.007572/1.404, allocations: 1.425 MB / 0.7934 GB, free: 35.85 MB / 474.7 MB
Notification: Performance of pre-optimization done (n=600): time 2.964e-05/1.404, allocations: 0.5625 kB / 0.7934 GB, free: 35.85 MB / 474.7 MB
Notification: Performance of matching and sorting (n=727): time 0.1661/1.57, allocations: 58.41 MB / 0.8504 GB, free: 5.344 MB / 490.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001626/1.57, allocations: 125.1 kB / 0.8506 GB, free: 5.207 MB / 490.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.007745/1.578, allocations: 3.709 MB / 0.8542 GB, free: 2.121 MB / 490.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.002112/1.58, allocations: 141.7 kB / 0.8543 GB, free: 1.977 MB / 490.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.002083/1.582, allocations: 1.931 MB / 0.8562 GB, free: 256 kB / 490.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.004558/1.587, allocations: 2.414 MB / 0.8586 GB, free: 14 MB / 0.4948 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.001703/1.588, allocations: 128 kB / 0.8587 GB, free: 13.88 MB / 0.4948 GB
Notification: Performance of setup shared object (initialization): time 0.0006047/1.589, allocations: 0.5615 MB / 0.8592 GB, free: 13.31 MB / 0.4948 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.01243/1.602, allocations: 7.437 MB / 0.8665 GB, free: 5.863 MB / 0.4948 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.3378/1.939, allocations: 8.184 MB / 0.8745 GB, free: 84.29 MB / 0.4948 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.01873/1.958, allocations: 8.123 MB / 0.8824 GB, free: 84.2 MB / 0.4948 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.482e-05/1.958, allocations: 2.906 kB / 0.8824 GB, free: 84.2 MB / 0.4948 GB
Notification: Performance of matching and sorting (n=816) (initialization): time 0.0777/2.036, allocations: 23.81 MB / 0.9057 GB, free: 83.95 MB / 0.4948 GB
Notification: Performance of prepare postOptimizeDAE: time 4.608e-05/2.036, allocations: 10.62 kB / 0.9057 GB, free: 83.95 MB / 0.4948 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 4.377e-05/2.036, allocations: 15.5 kB / 0.9057 GB, free: 83.95 MB / 0.4948 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.01184/2.048, allocations: 4.705 MB / 0.9103 GB, free: 83.92 MB / 0.4948 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.009223/2.057, allocations: 1.661 MB / 0.9119 GB, free: 83.92 MB / 0.4948 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.03678/2.094, allocations: 20.97 MB / 0.9324 GB, free: 79.5 MB / 0.4948 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01079/2.105, allocations: 443.6 kB / 0.9328 GB, free: 79.5 MB / 0.4948 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.002679/2.108, allocations: 325.2 kB / 0.9331 GB, free: 79.5 MB / 0.4948 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 61
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (760):
 * Single equations (assignments): 756
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems: 2 {(9,100.0%) 4,(1,100.0%) 3}
 * Non-linear torn systems: 2 {1 38,1 3}
Notification: Performance of prepare postOptimizeDAE: time 0.006848/2.115, allocations: 1.738 MB / 0.9348 GB, free: 79.39 MB / 0.4948 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.002954/2.117, allocations: 0.4921 MB / 0.9353 GB, free: 79.39 MB / 0.4948 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.05847/2.176, allocations: 21.41 MB / 0.9562 GB, free: 75.15 MB / 0.4948 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001294/2.176, allocations: 81.88 kB / 0.9563 GB, free: 75.15 MB / 0.4948 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 8.08e-05/2.176, allocations: 5.625 kB / 0.9563 GB, free: 75.15 MB / 0.4948 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0004174/2.177, allocations: 43.5 kB / 0.9563 GB, free: 75.15 MB / 0.4948 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.1/2.277, allocations: 46.69 MB / 1.002 GB, free: 53.28 MB / 0.4948 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001563/2.277, allocations: 16 kB / 1.002 GB, free: 53.27 MB / 0.4948 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.008647/2.286, allocations: 1.6 MB / 1.004 GB, free: 52.05 MB / 0.4948 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.009974/2.296, allocations: 3.474 MB / 1.007 GB, free: 49.69 MB / 0.4948 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.002362/2.298, allocations: 269.1 kB / 1.007 GB, free: 49.48 MB / 0.4948 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.02785/2.326, allocations: 15.44 MB / 1.022 GB, free: 36.79 MB / 0.4948 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.087e-05/2.326, allocations: 31.53 kB / 1.022 GB, free: 36.77 MB / 0.4948 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.08075/2.407, allocations: 32.82 MB / 1.054 GB, free: 4.086 MB / 0.4948 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.00667/2.413, allocations: 1.652 MB / 1.056 GB, free: 2.426 MB / 0.4948 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.002991/2.416, allocations: 186.1 kB / 1.056 GB, free: 2.246 MB / 0.4948 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.007136/2.424, allocations: 392 kB / 1.056 GB, free: 1.879 MB / 0.4948 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.002767/2.426, allocations: 0.6901 MB / 1.057 GB, free: 1.207 MB / 0.4948 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.001809/2.428, allocations: 303.8 kB / 1.057 GB, free: 0.9102 MB / 0.4948 GB
Notification: Performance of sorting global known variables: time 0.3055/2.734, allocations: 2.923 MB / 1.06 GB, free: 81.8 MB / 0.4948 GB
Notification: Performance of sort global known variables: time 5.71e-07/2.734, allocations: 1.781 kB / 1.06 GB, free: 81.8 MB / 0.4948 GB
Notification: Performance of remove unused functions: time 0.01252/2.746, allocations: 2.638 MB / 1.063 GB, free: 81.8 MB / 0.4948 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 77
 * Number of states: 19 (solution.temperature,OxyRHm[1].logn,OxyRHm[2].logn,OxyRHm[3].logn,OxyRHm[4].logn,DeoxyRHm[1].logn,DeoxyRHm[2].logn,DeoxyRHm[3].logn,DeoxyRHm[4].logn,OxyTHm[1].logn,OxyTHm[2].logn,OxyTHm[3].logn,OxyTHm[4].logn,DeoxyTHm[1].logn,DeoxyTHm[2].logn,DeoxyTHm[3].logn,DeoxyTHm[4].logn,oxygen_unbound.logn,H2O.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (799):
 * Single equations (assignments): 795
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems: 2 {(1,100.0%) 3,(9,100.0%) 4}
 * Non-linear torn systems: 2 {1 38,1 3}
Notification: Performance of Backend phase and start with SimCode phase: time 0.005072/2.751, allocations: 1.573 MB / 1.064 GB, free: 81.71 MB / 0.4948 GB
Notification: Performance of simCode: created initialization part: time 0.03055/2.782, allocations: 16.63 MB / 1.081 GB, free: 81.21 MB / 0.4948 GB
Notification: Performance of simCode: created event and clocks part: time 2.431e-05/2.782, allocations: 5 kB / 1.081 GB, free: 81.21 MB / 0.4948 GB
Notification: Performance of simCode: created simulation system equations: time 0.01653/2.799, allocations: 9.68 MB / 1.09 GB, free: 80.82 MB / 0.4948 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.008774/2.807, allocations: 1.681 MB / 1.092 GB, free: 80.77 MB / 0.4948 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.03809/2.846, allocations: 20.14 MB / 1.111 GB, free: 74.81 MB / 0.4948 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.004385/2.85, allocations: 4.19 MB / 1.116 GB, free: 73.95 MB / 0.4948 GB
Notification: Performance of simCode: alias equations: time 0.007951/2.858, allocations: 2.477 MB / 1.118 GB, free: 73.79 MB / 0.4948 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.002418/2.86, allocations: 0.5919 MB / 1.119 GB, free: 73.79 MB / 0.4948 GB
Notification: Performance of SimCode: time 1.382e-06/2.86, allocations: 0 / 1.119 GB, free: 73.79 MB / 0.4948 GB
Notification: Performance of Templates: time 0.5005/3.361, allocations: 152.8 MB / 1.268 GB, free: 74.71 MB / 0.4948 GB
make -j1 -f Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.makefile
(rm -f Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & ./Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC  -abortSlowSimulation -alarm=480 -lv LOG_STATS > Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1)