Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false) loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false) Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo) Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo) Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo) Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo) Running command: "" <> buildModelFMU(Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,fileNamePrefix="Chemical_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC",fmuType="me",version="2.0",platforms={"static"}) "" <> buildModelFMU(Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC,fileNamePrefix="Chemical_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC",fmuType="me",version="2.0",platforms={"static"}) Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo): time 0.1073/0.1073, allocations: 15.27 MB / 30.21 MB, free: 3.293 MB / 24.77 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001273/0.001273, allocations: 180.2 kB / 35.29 MB, free: 2.371 MB / 24.77 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.406/1.406, allocations: 223.2 MB / 263.4 MB, free: 6.555 MB / 202.7 MB Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.000874/0.0008742, allocations: 96.2 kB / 318.8 MB, free: 3.434 MB / 250.7 MB Notification: Performance of FrontEnd - loaded program: time 0.0003026/0.0003026, allocations: 12.34 kB / 384 MB, free: 50.73 MB / 298.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 0.102/0.1023, allocations: 54.65 MB / 438.7 MB, free: 280 kB / 298.7 MB Notification: Performance of FrontEnd - scodeFlatten: time 0.3781/0.4804, allocations: 105.9 MB / 0.5318 GB, free: 15.6 MB / 378.7 MB Notification: Performance of FrontEnd - mkProgramGraph: time 0.0002342/0.4807, allocations: 70.69 kB / 0.5319 GB, free: 15.6 MB / 378.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System solution.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Solution. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_in_air.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.ExternalIdealGasSubstance$oxygen_in_air. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2O. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyTHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System oxygen_unbound.system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$oxygen_unbound. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyRHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DeoxyRHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DeoxyRHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[4].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[3].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[2].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System OxyTHm[1].system declared as 'outer '. The existing 'inner' components are: There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$OxyTHm. Check if you have not misspelled the 'outer' component name. Please declare an 'inner' component with the same name in the top scope. Continuing flattening by only considering the 'outer' component declaration. Notification: Performance of FrontEnd - DAE generated: time 0.3645/0.8452, allocations: 145.6 MB / 0.674 GB, free: 8.797 MB / 474.7 MB Notification: Performance of FrontEnd: time 2.484e-06/0.8453, allocations: 0 / 0.674 GB, free: 8.797 MB / 474.7 MB Notification: Performance of Transformations before backend: time 0.0003802/0.8457, allocations: 111.9 kB / 0.6741 GB, free: 8.688 MB / 474.7 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 1226 * Number of variables: 1226 Notification: Performance of Generate backend data structure: time 0.01959/0.8653, allocations: 6.351 MB / 0.6803 GB, free: 2.258 MB / 474.7 MB Notification: Performance of prepare preOptimizeDAE: time 4.995e-05/0.8653, allocations: 12.03 kB / 0.6804 GB, free: 2.246 MB / 474.7 MB Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.002754/0.8681, allocations: 0.6577 MB / 0.681 GB, free: 1.578 MB / 474.7 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.006863/0.875, allocations: 1.482 MB / 0.6824 GB, free: 88 kB / 474.7 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.2519/1.127, allocations: 4.615 MB / 0.687 GB, free: 57.78 MB / 474.7 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0007041/1.128, allocations: 0.673 MB / 0.6876 GB, free: 57.42 MB / 474.7 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.002453/1.13, allocations: 0.4908 MB / 0.6881 GB, free: 57.42 MB / 474.7 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.02413/1.154, allocations: 12.51 MB / 0.7003 GB, free: 57.05 MB / 474.7 MB Notification: Performance of preOpt findStateOrder (simulation): time 9.872e-05/1.154, allocations: 3.75 kB / 0.7003 GB, free: 57.05 MB / 474.7 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0007171/1.155, allocations: 196.6 kB / 0.7005 GB, free: 57.05 MB / 474.7 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0001105/1.155, allocations: 118.6 kB / 0.7006 GB, free: 57.05 MB / 474.7 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.02457/1.18, allocations: 19.14 MB / 0.7193 GB, free: 57.01 MB / 474.7 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.06711/1.247, allocations: 41.79 MB / 0.7601 GB, free: 45.55 MB / 474.7 MB Notification: Performance of preOpt comSubExp (simulation): time 0.07533/1.322, allocations: 32.63 MB / 0.792 GB, free: 35.47 MB / 474.7 MB Notification: Performance of preOpt evalFunc (simulation): time 0.001316/1.324, allocations: 0.6637 MB / 0.7926 GB, free: 34.96 MB / 474.7 MB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 5.776e-05/1.324, allocations: 99.11 kB / 0.7927 GB, free: 34.85 MB / 474.7 MB Notification: Performance of preOpt simplifyInStream (simulation): time 0.007193/1.331, allocations: 1.424 MB / 0.7941 GB, free: 33.87 MB / 474.7 MB Notification: Performance of pre-optimization done (n=600): time 2.805e-05/1.331, allocations: 0 / 0.7941 GB, free: 33.87 MB / 474.7 MB Notification: Performance of matching and sorting (n=727): time 0.1656/1.497, allocations: 59.17 MB / 0.8519 GB, free: 4.707 MB / 490.7 MB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001021/1.497, allocations: 125.1 kB / 0.852 GB, free: 4.57 MB / 490.7 MB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.005677/1.502, allocations: 3.712 MB / 0.8556 GB, free: 0.8867 MB / 490.7 MB Notification: Performance of collectPreVariables (initialization): time 0.001484/1.504, allocations: 144.4 kB / 0.8558 GB, free: 0.7422 MB / 490.7 MB Notification: Performance of collectInitialEqns (initialization): time 0.001857/1.506, allocations: 1.924 MB / 0.8577 GB, free: 14.84 MB / 0.4948 GB Notification: Performance of collectInitialBindings (initialization): time 0.003643/1.51, allocations: 2.424 MB / 0.86 GB, free: 12.43 MB / 0.4948 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0007881/1.51, allocations: 124 kB / 0.8602 GB, free: 12.31 MB / 0.4948 GB Notification: Performance of setup shared object (initialization): time 0.0004956/1.511, allocations: 0.5548 MB / 0.8607 GB, free: 11.75 MB / 0.4948 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.01174/1.523, allocations: 7.447 MB / 0.868 GB, free: 4.297 MB / 0.4948 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.2622/1.785, allocations: 8.178 MB / 0.876 GB, free: 83.16 MB / 0.4948 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.01419/1.799, allocations: 8.125 MB / 0.8839 GB, free: 83.07 MB / 0.4948 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.737e-05/1.799, allocations: 3.938 kB / 0.8839 GB, free: 83.07 MB / 0.4948 GB Notification: Performance of matching and sorting (n=816) (initialization): time 0.07796/1.877, allocations: 23.81 MB / 0.9071 GB, free: 82.82 MB / 0.4948 GB Notification: Performance of prepare postOptimizeDAE: time 4.376e-05/1.877, allocations: 10.88 kB / 0.9072 GB, free: 82.82 MB / 0.4948 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 4.108e-05/1.877, allocations: 19.84 kB / 0.9072 GB, free: 82.82 MB / 0.4948 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.0118/1.889, allocations: 4.706 MB / 0.9118 GB, free: 82.79 MB / 0.4948 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.008156/1.897, allocations: 1.657 MB / 0.9134 GB, free: 82.79 MB / 0.4948 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.03433/1.932, allocations: 20.98 MB / 0.9339 GB, free: 78.37 MB / 0.4948 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.007873/1.94, allocations: 442.4 kB / 0.9343 GB, free: 78.37 MB / 0.4948 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.001959/1.942, allocations: 323.1 kB / 0.9346 GB, free: 78.37 MB / 0.4948 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 61 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (760): * Single equations (assignments): 756 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 2 {(9,100.0%) 4,(1,100.0%) 3} * Non-linear torn systems: 2 {1 38,1 3} Notification: Performance of prepare postOptimizeDAE: time 0.004432/1.946, allocations: 1.738 MB / 0.9363 GB, free: 78.25 MB / 0.4948 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.001353/1.947, allocations: 0.4926 MB / 0.9368 GB, free: 78.25 MB / 0.4948 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.05059/1.998, allocations: 21.4 MB / 0.9577 GB, free: 73.5 MB / 0.4948 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001051/1.998, allocations: 82.41 kB / 0.9578 GB, free: 73.5 MB / 0.4948 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 3.084e-05/1.998, allocations: 3.688 kB / 0.9578 GB, free: 73.5 MB / 0.4948 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0002522/1.998, allocations: 42.14 kB / 0.9578 GB, free: 73.5 MB / 0.4948 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.07983/2.078, allocations: 46.7 MB / 1.003 GB, free: 50.48 MB / 0.4948 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 9.305e-05/2.078, allocations: 16 kB / 1.003 GB, free: 50.46 MB / 0.4948 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.007609/2.086, allocations: 1.602 MB / 1.005 GB, free: 49.25 MB / 0.4948 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.009006/2.095, allocations: 3.466 MB / 1.008 GB, free: 46.89 MB / 0.4948 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.001392/2.096, allocations: 271 kB / 1.009 GB, free: 46.68 MB / 0.4948 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.02429/2.121, allocations: 15.45 MB / 1.024 GB, free: 33.99 MB / 0.4948 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.176e-05/2.121, allocations: 23.69 kB / 1.024 GB, free: 33.98 MB / 0.4948 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.06269/2.183, allocations: 32.82 MB / 1.056 GB, free: 1.461 MB / 0.4948 GB Notification: Performance of postOpt removeConstants (simulation): time 0.2706/2.454, allocations: 1.653 MB / 1.057 GB, free: 80.93 MB / 0.4948 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.002687/2.457, allocations: 186.5 kB / 1.058 GB, free: 80.93 MB / 0.4948 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.006239/2.463, allocations: 389.5 kB / 1.058 GB, free: 80.93 MB / 0.4948 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.002086/2.465, allocations: 0.6902 MB / 1.059 GB, free: 80.92 MB / 0.4948 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.001052/2.466, allocations: 304.5 kB / 1.059 GB, free: 80.92 MB / 0.4948 GB Notification: Performance of sorting global known variables: time 0.005264/2.472, allocations: 2.927 MB / 1.062 GB, free: 80.78 MB / 0.4948 GB Notification: Performance of sort global known variables: time 7.11e-07/2.472, allocations: 0 / 1.062 GB, free: 80.78 MB / 0.4948 GB Notification: Performance of remove unused functions: time 0.01376/2.485, allocations: 2.632 MB / 1.064 GB, free: 80.78 MB / 0.4948 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 77 * Number of states: 19 (solution.temperature,OxyRHm[1].logn,OxyRHm[2].logn,OxyRHm[3].logn,OxyRHm[4].logn,DeoxyRHm[1].logn,DeoxyRHm[2].logn,DeoxyRHm[3].logn,DeoxyRHm[4].logn,OxyTHm[1].logn,OxyTHm[2].logn,OxyTHm[3].logn,OxyTHm[4].logn,DeoxyTHm[1].logn,DeoxyTHm[2].logn,DeoxyTHm[3].logn,DeoxyTHm[4].logn,oxygen_unbound.logn,H2O.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (799): * Single equations (assignments): 795 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (linear and non-linear blocks): 0 * Torn equation systems: 4 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems: 2 {(1,100.0%) 3,(9,100.0%) 4} * Non-linear torn systems: 2 {1 38,1 3} Notification: Performance of Backend phase and start with SimCode phase: time 0.07801/2.563, allocations: 39.11 MB / 1.103 GB, free: 72.32 MB / 0.4948 GB Notification: Performance of simCode: created initialization part: time 0.0267/2.59, allocations: 16.63 MB / 1.119 GB, free: 71.81 MB / 0.4948 GB Notification: Performance of simCode: created event and clocks part: time 1.9e-05/2.59, allocations: 7.484 kB / 1.119 GB, free: 71.81 MB / 0.4948 GB Notification: Performance of simCode: created simulation system equations: time 0.01605/2.606, allocations: 9.682 MB / 1.128 GB, free: 70.4 MB / 0.4948 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00791/2.614, allocations: 1.677 MB / 1.13 GB, free: 70.02 MB / 0.4948 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.04511/2.659, allocations: 41.07 MB / 1.17 GB, free: 40.29 MB / 0.4948 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.003597/2.663, allocations: 4.185 MB / 1.174 GB, free: 39.11 MB / 0.4948 GB Notification: Performance of simCode: alias equations: time 0.007775/2.671, allocations: 2.477 MB / 1.176 GB, free: 38.94 MB / 0.4948 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.004655/2.676, allocations: 2.676 MB / 1.179 GB, free: 36.96 MB / 0.4948 GB Notification: Performance of SimCode: time 8.22e-07/2.676, allocations: 0 / 1.179 GB, free: 36.96 MB / 0.4948 GB Notification: Performance of buildModelFMU: Generate the FMI files: time 0.5504/3.226, allocations: 203.7 MB / 1.378 GB, free: 22.62 MB / 0.4948 GB Notification: Performance of buildModelFMU: configured platform static using cached values: time 0.0001554/3.226, allocations: 214.3 kB / 1.378 GB, free: 22.38 MB / 0.4948 GB Notification: Performance of buildModelFMU: Generate platform static: time 8.38/11.61, allocations: 4.062 kB / 1.378 GB, free: 22.37 MB / 0.4948 GB (rm -f Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; mkfifo Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe ; head -c 1048576 < Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe >> ../files/Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.sim & /home/hudson/saved_omc/OMSimulator/install/linux/bin/OMSimulator --tempDir=temp_Chemical_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC_fmu --startTime=0 --stopTime=15000 --timeout=50 --tolerance=1e-06 Chemical_Chemical_Examples_Hemoglobin_Allosteric_Hemoglobin2_MWC.fmu > Chemical_Chemical.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC.pipe 2>&1)