Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Chemical_Chemical.Examples.AcidBase.Dev.RedCellMembrane.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Using package Chemical with version 1.4.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo)
Running command: "" <> buildModelFMU(Chemical.Examples.AcidBase.Dev.RedCellMembrane,fileNamePrefix="Chemical_Chemical_Examples_AcidBase_Dev_RedCellMembrane",fmuType="me",version="2.0",platforms={"static"})
"" <> buildModelFMU(Chemical.Examples.AcidBase.Dev.RedCellMembrane,fileNamePrefix="Chemical_Chemical_Examples_AcidBase_Dev_RedCellMembrane",fmuType="me",version="2.0",platforms={"static"})
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo): time 0.1463/0.1463, allocations: 15.26 MB / 30.21 MB, free: 3.297 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001255/0.001255, allocations: 177.2 kB / 35.29 MB, free: 2.383 MB / 24.77 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.44/1.44, allocations: 223.2 MB / 263.4 MB, free: 6.559 MB / 202.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0008521/0.000852, allocations: 92.33 kB / 318.8 MB, free: 3.453 MB / 250.7 MB
Notification: Performance of FrontEnd - loaded program: time 0.0005025/0.0005027, allocations: 11.86 kB / 384 MB, free: 50.72 MB / 298.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1186/0.1192, allocations: 54.64 MB / 438.7 MB, free: 300 kB / 298.7 MB
Notification: Performance of FrontEnd - scodeFlatten: time 0.3764/0.4956, allocations: 103.6 MB / 0.5295 GB, free: 15.44 MB / 378.7 MB
Notification: Performance of FrontEnd - mkProgramGraph: time 0.0002517/0.4959, allocations: 69.98 kB / 0.5296 GB, free: 15.44 MB / 378.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System blood_erythrocytes.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Solution$blood_erythrocytes.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:4721:7-4721:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System blood_plasma.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Solution.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System HCO3.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$HCO3.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2O.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System HCO3_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$HCO3_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2O_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Cl_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Cl_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Cl.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Cl.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System albumin.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$albumin.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System permeableUncharged.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$permeableUncharged.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System permeableUncharged_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$permeableUncharged_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System chargedImpermeable_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$chargedImpermeable_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Lac_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Lac_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Lac.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Lac.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System CO2.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$CO2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System CO2_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$CO2_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System O2.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$O2.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System O2_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$O2_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System K.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$K.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Na.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Na.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Na_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Na_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System K_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$K_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2PO4_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$H2PO4_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System ADP_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$ADP_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System ATP_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$ATP_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System HPO4_E.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$HPO4_E.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System globulins.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$globulins.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Ca.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Ca.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Mg.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$Mg.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System DPG.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$DPG.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System GSH.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Components.Substance$GSH.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.0-master/package.mo:3011:6-3011:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System Hemoglobin.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Chemical.Sources.Buffer$Hemoglobin.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
Notification: Performance of FrontEnd - DAE generated: time 1.373/1.869, allocations: 342.7 MB / 0.8643 GB, free: 27.76 MB / 0.4948 GB
Notification: Performance of FrontEnd: time 3.156e-06/1.869, allocations: 2.375 kB / 0.8643 GB, free: 27.76 MB / 0.4948 GB
Notification: Performance of Transformations before backend: time 0.0007666/1.87, allocations: 156.4 kB / 0.8644 GB, free: 27.76 MB / 0.4948 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 1818
 * Number of variables: 1818
Notification: Performance of Generate backend data structure: time 0.03693/1.907, allocations: 9.737 MB / 0.8739 GB, free: 24.41 MB / 0.4948 GB
Notification: Performance of prepare preOptimizeDAE: time 5.387e-05/1.907, allocations: 11.44 kB / 0.8739 GB, free: 24.41 MB / 0.4948 GB
Notification: Performance of preOpt introduceOutputAliases (simulation): time 0.004175/1.911, allocations: 0.9042 MB / 0.8748 GB, free: 24.33 MB / 0.4948 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.01352/1.925, allocations: 2.369 MB / 0.8771 GB, free: 23.81 MB / 0.4948 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.01946/1.944, allocations: 5.326 MB / 0.8823 GB, free: 22.85 MB / 0.4948 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0009903/1.945, allocations: 0.5538 MB / 0.8829 GB, free: 22.8 MB / 0.4948 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.004929/1.95, allocations: 0.7339 MB / 0.8836 GB, free: 22.79 MB / 0.4948 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.03384/1.984, allocations: 14.13 MB / 0.8974 GB, free: 22.25 MB / 0.4948 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.0003616/1.984, allocations: 7.75 kB / 0.8974 GB, free: 22.25 MB / 0.4948 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.002639/1.987, allocations: 289.1 kB / 0.8977 GB, free: 22.25 MB / 0.4948 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0001093/1.987, allocations: 178.5 kB / 0.8978 GB, free: 22.25 MB / 0.4948 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.03469/2.022, allocations: 21.89 MB / 0.9192 GB, free: 22.19 MB / 0.4948 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.08661/2.108, allocations: 43.84 MB / 0.962 GB, free: 6.805 MB / 0.4948 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.03668/2.145, allocations: 22.36 MB / 0.9839 GB, free: 12.96 MB / 0.5105 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.005989/2.151, allocations: 2.413 MB / 0.9862 GB, free: 12.29 MB / 0.5105 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001988/2.151, allocations: 122.5 kB / 0.9863 GB, free: 12.19 MB / 0.5105 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.006707/2.158, allocations: 0.7142 MB / 0.987 GB, free: 11.73 MB / 0.5105 GB
Notification: Performance of pre-optimization done (n=925): time 3.772e-05/2.158, allocations: 0.75 kB / 0.987 GB, free: 11.73 MB / 0.5105 GB
Notification: Performance of matching and sorting (n=1305): time 0.7591/2.917, allocations: 116.7 MB / 1.101 GB, free: 81.14 MB / 0.5573 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 9.735e-05/2.917, allocations: 185.8 kB / 1.101 GB, free: 81.07 MB / 0.5573 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.006332/2.924, allocations: 4.315 MB / 1.105 GB, free: 80.77 MB / 0.5573 GB
Notification: Performance of collectPreVariables (initialization): time 0.00223/2.926, allocations: 239.7 kB / 1.106 GB, free: 80.74 MB / 0.5573 GB
Notification: Performance of collectInitialEqns (initialization): time 0.002019/2.928, allocations: 2.894 MB / 1.108 GB, free: 80.07 MB / 0.5573 GB
Notification: Performance of collectInitialBindings (initialization): time 0.004821/2.933, allocations: 4.329 MB / 1.113 GB, free: 77.54 MB / 0.5573 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.000937/2.934, allocations: 228 kB / 1.113 GB, free: 77.54 MB / 0.5573 GB
Notification: Performance of setup shared object (initialization): time 0.0005569/2.934, allocations: 0.7286 MB / 1.114 GB, free: 77.21 MB / 0.5573 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0122/2.947, allocations: 8.386 MB / 1.122 GB, free: 77.18 MB / 0.5573 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.01418/2.961, allocations: 9.781 MB / 1.131 GB, free: 76.06 MB / 0.5573 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.01593/2.977, allocations: 9.096 MB / 1.14 GB, free: 75.93 MB / 0.5573 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 8.848e-05/2.977, allocations: 12.55 kB / 1.14 GB, free: 75.93 MB / 0.5573 GB
Notification: Performance of matching and sorting (n=1471) (initialization): time 0.04964/3.027, allocations: 22.99 MB / 1.163 GB, free: 68.09 MB / 0.5573 GB
Notification: Performance of prepare postOptimizeDAE: time 5.133e-05/3.027, allocations: 16.62 kB / 1.163 GB, free: 68.09 MB / 0.5573 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 4.778e-05/3.027, allocations: 25.78 kB / 1.163 GB, free: 68.09 MB / 0.5573 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.02117/3.048, allocations: 5.338 MB / 1.168 GB, free: 66.81 MB / 0.5573 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01437/3.062, allocations: 2.48 MB / 1.17 GB, free: 66.73 MB / 0.5573 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.02644/3.089, allocations: 18.62 MB / 1.189 GB, free: 53.94 MB / 0.5573 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01088/3.1, allocations: 482.4 kB / 1.189 GB, free: 53.73 MB / 0.5573 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.002354/3.102, allocations: 0.4906 MB / 1.19 GB, free: 53.64 MB / 0.5573 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 127
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (1295):
 * Single equations (assignments): 1288
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 7
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems: 3 {(2,100.0%) 36,(1,100.0%) 3,(1,100.0%) 3}
 * Non-linear torn systems: 4 {3 99,1 3,1 26,1 3}
Notification: Performance of prepare postOptimizeDAE: time 0.005473/3.108, allocations: 1.388 MB / 1.191 GB, free: 52.79 MB / 0.5573 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.002445/3.11, allocations: 0.8201 MB / 1.192 GB, free: 52.36 MB / 0.5573 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.04329/3.153, allocations: 24.45 MB / 1.216 GB, free: 42.15 MB / 0.5573 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0001734/3.154, allocations: 145.5 kB / 1.216 GB, free: 42.15 MB / 0.5573 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 6.153e-05/3.154, allocations: 11.08 kB / 1.216 GB, free: 42.15 MB / 0.5573 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0004743/3.154, allocations: 71.86 kB / 1.216 GB, free: 42.15 MB / 0.5573 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.5843/3.738, allocations: 115.3 MB / 1.328 GB, free: 93.68 MB / 0.573 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002194/3.739, allocations: 49.81 kB / 1.328 GB, free: 93.68 MB / 0.573 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01373/3.752, allocations: 2.41 MB / 1.331 GB, free: 93.68 MB / 0.573 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.02057/3.773, allocations: 5.133 MB / 1.336 GB, free: 93.57 MB / 0.573 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.003415/3.776, allocations: 443.7 kB / 1.336 GB, free: 93.57 MB / 0.573 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.02455/3.801, allocations: 17.53 MB / 1.353 GB, free: 85.88 MB / 0.573 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 5.232e-05/3.801, allocations: 81.28 kB / 1.353 GB, free: 85.88 MB / 0.573 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.06473/3.866, allocations: 46.15 MB / 1.399 GB, free: 61.6 MB / 0.573 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.003251/3.869, allocations: 0.9569 MB / 1.399 GB, free: 61.08 MB / 0.573 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.003937/3.873, allocations: 339.6 kB / 1.4 GB, free: 60.88 MB / 0.573 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.009788/3.883, allocations: 469.6 kB / 1.4 GB, free: 60.68 MB / 0.573 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.002802/3.886, allocations: 1.073 MB / 1.401 GB, free: 60.51 MB / 0.573 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.001763/3.888, allocations: 0.5068 MB / 1.402 GB, free: 60.42 MB / 0.573 GB
Notification: Performance of sorting global known variables: time 0.005206/3.893, allocations: 3.309 MB / 1.405 GB, free: 59.18 MB / 0.573 GB
Notification: Performance of sort global known variables: time 1.6e-07/3.893, allocations: 0 / 1.405 GB, free: 59.18 MB / 0.573 GB
Notification: Performance of remove unused functions: time 0.02242/3.915, allocations: 6.128 MB / 1.411 GB, free: 58.51 MB / 0.573 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 236
 * Number of states: 34 (blood_erythrocytes.temperature,blood_erythrocytes.mass,blood_plasma.temperature,HCO3.logn,H2O.logn,HCO3_E.logn,H2O_E.logn,Cl_E.logn,Cl.logn,albumin.logn,permeableUncharged.logn,permeableUncharged_E.logn,chargedImpermeable_E.logn,Lac_E.logn,Lac.logn,H_E.logn,H.logn,CO2.logn,CO2_E.logn,O2.logn,O2_E.logn,K.logn,Na.logn,Na_E.logn,K_E.logn,H2PO4_E.logn,ADP_E.logn,ATP_E.logn,HPO4_E.logn,globulins.logn,Ca.logn,Mg.logn,DPG.logn,GSH.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (1307):
 * Single equations (assignments): 1300
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (linear and non-linear blocks): 0
 * Torn equation systems: 7
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems: 3 {(2,100.0%) 36,(1,100.0%) 3,(1,100.0%) 3}
 * Non-linear torn systems: 4 {4 117,1 3,1 26,1 3}
Notification: Performance of Backend phase and start with SimCode phase: time 0.08717/4.002, allocations: 63.8 MB / 1.473 GB, free: 8.035 MB / 0.573 GB
Notification: Performance of simCode: created initialization part: time 0.03581/4.038, allocations: 20.56 MB / 1.493 GB, free: 5.469 MB / 0.5886 GB
Notification: Performance of simCode: created event and clocks part: time 5.72e-05/4.038, allocations: 8 kB / 1.493 GB, free: 5.461 MB / 0.5886 GB
Notification: Performance of simCode: created simulation system equations: time 0.3526/4.391, allocations: 12.21 MB / 1.505 GB, free: 106.6 MB / 0.5886 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.01749/4.409, allocations: 2.566 MB / 1.508 GB, free: 106.6 MB / 0.5886 GB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.07653/4.485, allocations: 73.15 MB / 1.579 GB, free: 50.55 MB / 0.5886 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.004295/4.489, allocations: 4.32 MB / 1.583 GB, free: 49.64 MB / 0.5886 GB
Notification: Performance of simCode: alias equations: time 0.01075/4.5, allocations: 1.673 MB / 1.585 GB, free: 49.44 MB / 0.5886 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.008543/4.509, allocations: 4.463 MB / 1.589 GB, free: 49.43 MB / 0.5886 GB
Notification: Performance of SimCode: time 8.186e-06/4.509, allocations: 0 / 1.589 GB, free: 49.43 MB / 0.5886 GB
Notification: Performance of buildModelFMU: Generate the FMI files: time 0.849/5.358, allocations: 321.8 MB / 1.904 GB, free: 22.52 MB / 0.5886 GB
Notification: Performance of buildModelFMU: configured platform static using cached values: time 0.000143/5.358, allocations: 196.6 kB / 1.904 GB, free: 22.28 MB / 0.5886 GB
Notification: Performance of buildModelFMU: Generate platform static: time 15.61/20.97, allocations: 0 / 1.904 GB, free: 22.28 MB / 0.5886 GB
(rm -f Chemical_Chemical.Examples.AcidBase.Dev.RedCellMembrane.pipe ; mkfifo Chemical_Chemical.Examples.AcidBase.Dev.RedCellMembrane.pipe ; head -c 1048576 < Chemical_Chemical.Examples.AcidBase.Dev.RedCellMembrane.pipe >> ../files/Chemical_Chemical.Examples.AcidBase.Dev.RedCellMembrane.sim & /home/hudson/saved_omc/OMSimulator/install/linux/bin/OMSimulator  --tempDir=temp_Chemical_Chemical_Examples_AcidBase_Dev_RedCellMembrane_fmu --startTime=0 --stopTime=1e-08 --timeout=50 --tolerance=1e-06 Chemical_Chemical_Examples_AcidBase_Dev_RedCellMembrane.fmu > Chemical_Chemical.Examples.AcidBase.Dev.RedCellMembrane.pipe 2>&1)