Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries/ --ompython_omhome=/usr Physiolibrary_Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo", uses=false)
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo", uses=false)
Using package Physiolibrary with version 3.0.0-beta1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo)
Using package ModelicaServices with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo)
Using package Modelica with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo)
Using package Complex with version 4.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo)
Running command: translateModel(Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2")
translateModel(Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2,tolerance=1e-06,outputFormat="empty",numberOfIntervals=5000,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2")
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.0.0+maint.om/package.mo): time 0.001348/0.001348, allocations: 176.2 kB / 7.648 MB, free: 1.422 MB / 5.871 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.0.0+maint.om/package.mo): time 1.301/1.301, allocations: 221.5 MB / 229.6 MB, free: 7.574 MB / 186.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.0.0+maint.om/package.mo): time 0.0008002/0.0008, allocations: 87.61 kB / 280.5 MB, free: 5.328 MB / 234.7 MB
Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/package.mo): time 0.1889/0.1889, allocations: 37.08 MB / 368.3 MB, free: 9.984 MB / 266.7 MB
Notification: Performance of FrontEnd - loaded program: time 1.856e-05/1.858e-05, allocations: 4 kB / 434.6 MB, free: 23.12 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 0.1264/0.1265, allocations: 60.08 MB / 494.7 MB, free: 11.07 MB / 330.7 MB
Notification: Performance of FrontEnd - scodeFlatten: time 0.4249/0.5514, allocations: 108 MB / 0.5885 GB, free: 10.59 MB / 394.7 MB
Notification: Performance of FrontEnd - mkProgramGraph: time 0.0001911/0.5516, allocations: 74.22 kB / 0.5886 GB, free: 10.55 MB / 394.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4722:7-4722:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System cathode.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Components.Solution$cathode.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:4722:7-4722:66:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System anode.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Components.Solution$anode.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:3037:6-3037:65:writable] Warning: No corresponding 'inner' declaration found for component .Modelica.Fluid.System H2O.system declared as 'outer '.
  The existing 'inner' components are:
    There are no 'inner' components defined in the model in any of the parent scopes of 'outer' component's scope: Physiolibrary.Chemical.Sources.PureSubstance$H2O.
  Check if you have not misspelled the 'outer' component name.
  Please declare an 'inner' component with the same name in the top scope.
  Continuing flattening by only considering the 'outer' component declaration.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:2844:5-2845:38:writable] Notification: From here:
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0-master/Chemical.mo:5124:5-5125:53:writable] Error: Duplicate elements (due to inherited elements) not identical:
  first element is:  flow Modelica.Units.SI.MolarFlowRate q "Molar change of the substance"
  second element is: flow .Real q "Change of the substance in nonspecific units"
Error: Error occurred while flattening model Physiolibrary.Chemical.Examples.CheckSubstancesData.StandardElectrochemicalCell2
Notification: Performance of FrontEnd: time 0.01955/0.5712, allocations: 8.326 MB / 0.5967 GB, free: 3.824 MB / 394.7 MB