Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "[:1:22-1:33:writable] Warning: Modelica only supports 32-bit signed integers! Transforming: 13743895347 into a real Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0003276/0.0003276, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00025/0.00025, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.1979/0.1979, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.003943/0.003943, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: simulate(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration,startTime=0,stopTime=0.0235,tolerance=1e-06,numberOfIntervals=2500,outputFormat="empty",variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration",simflags="-abortSlowSimulation -alarm=240 -lv LOG_STATS") simulate(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration,startTime=0,stopTime=0.0235,tolerance=1e-06,numberOfIntervals=2500,outputFormat="empty",variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.AcidBase.AlbuminTitration",simflags="-abortSlowSimulation -alarm=240 -lv LOG_STATS") [Timeout 900] "Notification: Performance of FrontEnd - loaded program: time 7.82e-07/7.82e-07, allocations: 0 / 0, free: 0 / 0 Notification: Performance of FrontEnd - Absyn->SCode: time 1.831e-05/1.91e-05, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.AcidBase.AlbuminTitration): time 0.002295/0.002314, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFInst.instExpressions: time 0.00394/0.006255, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFInst.updateImplicitVariability: time 0.0003602/0.006615, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFTyping.typeComponents: time 0.0002076/0.006823, allocations: 0 / 0, free: 0 / 0 [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.0015/0.008323, allocations: 0 / 0, free: 0 / 0 [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.H3O.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.AcidBase.AlbuminTitration.HA.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.001106/0.009429, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFFlatten.flatten: time 0.02985/0.03928, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFFlatten.resolveConnections: time 0.01242/0.05171, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFEvalConstants.evaluate: time 0.05612/0.1078, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFSimplifyModel.simplify: time 0.07671/0.1845, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFPackage.collectConstants: time 0.01509/0.1996, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFFlatten.collectFunctions: time 0.02023/0.2198, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFScalarize.scalarize: time 0.04432/0.2642, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFVerifyModel.verify: time 0.05906/0.3232, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFConvertDAE.convert: time 0.1042/0.4274, allocations: 0 / 0, free: 0 / 0 Notification: Performance of FrontEnd - DAE generated: time 0.02049/0.4479, allocations: 0 / 0, free: 0 / 0 Notification: Performance of FrontEnd: time 1.553e-06/0.4479, allocations: 0 / 0, free: 0 / 0 Notification: Performance of Transformations before backend: time 0.001167/0.4491, allocations: 0 / 0, free: 0 / 0 Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 7426 * Number of variables: 7426 Notification: Performance of Generate backend data structure: time 0.1141/0.5632, allocations: 0 / 0, free: 0 / 0 Notification: Performance of prepare preOptimizeDAE: time 0.005971/0.5692, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02073/0.5899, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt evaluateParameters (simulation): time 0.05687/0.6468, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00326/0.65, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt expandDerOperator (simulation): time 0.006332/0.6564, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt clockPartitioning (simulation): time 0.06097/0.7173, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt findStateOrder (simulation): time 0.0004815/0.7178, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.004465/0.7223, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0008994/0.7232, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt removeEqualRHS (simulation): time 0.05423/0.7774, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1886/0.966, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt comSubExp (simulation): time 0.01439/0.9804, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt resolveLoops (simulation): time 0.006476/0.9868, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt evalFunc (simulation): time 0.0007264/0.9876, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0004003/0.988, allocations: 0 / 0, free: 0 / 0 Notification: Performance of pre-optimization done (n=1533): time 4.24e-05/0.988, allocations: 0 / 0, free: 0 / 0 Notification: Performance of matching and sorting (n=1533): time 0.293/1.281, allocations: 0 / 0, free: 0 / 0 Notification: Performance of inlineWhenForInitialization (initialization): time 0.0006017/1.282, allocations: 0 / 0, free: 0 / 0 Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.08124/1.363, allocations: 0 / 0, free: 0 / 0 Notification: Performance of collectPreVariables (initialization): time 0.004592/1.367, allocations: 0 / 0, free: 0 / 0 Notification: Performance of collectInitialEqns (initialization): time 0.01725/1.385, allocations: 0 / 0, free: 0 / 0 Notification: Performance of collectInitialBindings (initialization): time 0.007938/1.393, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simplifyInitialFunctions (initialization): time 0.02206/1.415, allocations: 0 / 0, free: 0 / 0 Notification: Performance of setup shared object (initialization): time 2.407e-05/1.415, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preBalanceInitialSystem (initialization): time 0.01112/1.426, allocations: 0 / 0, free: 0 / 0 Notification: Performance of partitionIndependentBlocks (initialization): time 0.0183/1.444, allocations: 0 / 0, free: 0 / 0 Notification: Performance of analyzeInitialSystem (initialization): time 0.02572/1.47, allocations: 0 / 0, free: 0 / 0 Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.000962/1.471, allocations: 0 / 0, free: 0 / 0 Notification: Performance of matching and sorting (n=5244) (initialization): time 0.3788/1.85, allocations: 0 / 0, free: 0 / 0 Notification: Performance of prepare postOptimizeDAE: time 0.001136/1.851, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.003122/1.854, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt tearingSystem (initialization): time 0.3943/2.248, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.01927/2.267, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2137/2.481, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.03047/2.512, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01034/2.522, allocations: 0 / 0, free: 0 / 0 Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 3277 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (4372): * Single equations (assignments): 4371 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(437,436)} Notification: Performance of prepare postOptimizeDAE: time 0.02957/2.552, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt lateInlineFunction (simulation): time 0.009893/2.561, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.01322/2.575, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.0002778/2.575, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt constantLinearSystem (simulation): time 7.184e-05/2.575, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0001864/2.575, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.3833/2.958, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002804/2.959, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.003561/2.962, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt tearingSystem (simulation): time 0.3708/3.333, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.004176/3.337, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.2005/3.538, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 4.831e-05/3.538, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt symbolicJacobian (simulation): time 0.2642/3.802, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt removeConstants (simulation): time 0.01833/3.82, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0179/3.838, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02608/3.864, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01945/3.884, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.004568/3.888, allocations: 0 / 0, free: 0 / 0 Notification: Performance of sorting global known variables: time 0.05134/3.94, allocations: 0 / 0, free: 0 / 0 Notification: Performance of sort global known variables: time 0.00519/3.945, allocations: 0 / 0, free: 0 / 0 Notification: Performance of remove unused functions: time 0.07198/4.017, allocations: 0 / 0, free: 0 / 0 Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 221 * Number of states: 219 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* Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (661): * Single equations (assignments): 660 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 1 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 0 systems * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(437,436)} Notification: Performance of Backend phase and start with SimCode phase: time 0.02005/4.037, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created initialization part: time 0.06498/4.102, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created event and clocks part: time 0.003547/4.105, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created simulation system equations: time 0.0419/4.147, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0922/4.24, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1498/4.389, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: some other stuff during SimCode phase: time 0.05953/4.449, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: alias equations: time 0.01898/4.468, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: all other stuff during SimCode phase: time 0.03604/4.504, allocations: 0 / 0, free: 0 / 0 Notification: Performance of SimCode: time 0.00372/4.508, allocations: 0 / 0, free: 0 / 0 Notification: Performance of Templates: time 0.4542/4.962, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 885] [Calling sys.exit(0), Time elapsed: 15.237399311736226]