Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo): time 0.08265/0.08265, allocations: 11.15 MB / 31.01 MB, free: 3.871 MB / 24.77 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009116/0.0009116, allocations: 91.42 kB / 38.74 MB, free: 6.359 MB / 33.03 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009806/0.0009806, allocations: 162.3 kB / 42.14 MB, free: 2.953 MB / 33.03 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9352/0.9352, allocations: 177.1 MB / 222.6 MB, free: 6.219 MB / 202.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.1917/0.1917, allocations: 17.62 MB / 296.7 MB, free: 1.168 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo)
Running command: translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary")
translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.244e-06/2.244e-06, allocations: 0 / 321 MB, free: 14.05 MB / 298.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.451e-05/2.675e-05, allocations: 3.719 kB / 321 MB, free: 14.05 MB / 298.7 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary): time 0.06552/0.06555, allocations: 70.27 MB / 391.2 MB, free: 7.523 MB / 362.7 MB
Notification: Performance of NFInst.instExpressions: time 0.03161/0.09715, allocations: 23.53 MB / 414.8 MB, free: 15.91 MB / 394.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.005181/0.1023, allocations: 155.2 kB / 414.9 MB, free: 15.76 MB / 394.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003131/0.1055, allocations: 1.786 MB / 416.7 MB, free: 13.96 MB / 394.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.01209/0.1176, allocations: 7.285 MB / 424 MB, free: 6.629 MB / 394.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.01062/0.1282, allocations: 7.789 MB / 431.8 MB, free: 14.82 MB / 410.7 MB
Notification: Performance of NFFlatten.flatten: time 0.158/0.2862, allocations: 22.56 MB / 454.3 MB, free: 27.69 MB / 410.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.02366/0.3099, allocations: 23.46 MB / 477.8 MB, free: 25.41 MB / 410.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1984/0.5083, allocations: 79.37 MB / 0.5441 GB, free: 6.039 MB / 442.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.6335/1.142, allocations: 208.4 MB / 0.7476 GB, free: 25.99 MB / 0.4948 GB
Notification: Performance of NFPackage.collectConstants: time 0.008455/1.15, allocations: 3.969 MB / 0.7515 GB, free: 22.02 MB / 0.4948 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.4567/1.607, allocations: 129.6 MB / 0.8781 GB, free: 107.4 MB / 0.5261 GB
Notification: Performance of NFScalarize.scalarize: time 0.01757/1.624, allocations: 20.42 MB / 0.898 GB, free: 107.3 MB / 0.5261 GB
Notification: Performance of NFVerifyModel.verify: time 0.02714/1.652, allocations: 16.89 MB / 0.9145 GB, free: 94.87 MB / 0.5261 GB
Notification: Performance of NFConvertDAE.convert: time 0.04062/1.692, allocations: 46 MB / 0.9594 GB, free: 52.04 MB / 0.5261 GB
Notification: Performance of FrontEnd - DAE generated: time 5.481e-06/1.692, allocations: 0 / 0.9594 GB, free: 52.04 MB / 0.5261 GB
Notification: Performance of FrontEnd: time 1.343e-06/1.692, allocations: 3.938 kB / 0.9594 GB, free: 52.04 MB / 0.5261 GB
Notification: Performance of Transformations before backend: time 0.0012/1.693, allocations: 0 / 0.9594 GB, free: 52.04 MB / 0.5261 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 8166
 * Number of variables: 8166
Notification: Performance of Generate backend data structure: time 0.04463/1.738, allocations: 30.04 MB / 0.9888 GB, free: 23.38 MB / 0.5261 GB
Notification: Performance of prepare preOptimizeDAE: time 3.646e-05/1.738, allocations: 12.03 kB / 0.9888 GB, free: 23.37 MB / 0.5261 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.01117/1.749, allocations: 5.859 MB / 0.9945 GB, free: 17.55 MB / 0.5261 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.01636/1.766, allocations: 10.96 MB / 1.005 GB, free: 7.383 MB / 0.5261 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00146/1.767, allocations: 2.685 MB / 1.008 GB, free: 4.699 MB / 0.5261 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.004812/1.772, allocations: 2.785 MB / 1.011 GB, free: 1.934 MB / 0.5261 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.2917/2.064, allocations: 34.67 MB / 1.044 GB, free: 187 MB / 0.5262 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.0004921/2.064, allocations: 113.9 kB / 1.045 GB, free: 187 MB / 0.5262 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.003092/2.067, allocations: 1.123 MB / 1.046 GB, free: 187 MB / 0.5262 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0008346/2.068, allocations: 1.545 MB / 1.047 GB, free: 186.6 MB / 0.5262 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.03362/2.102, allocations: 27.4 MB / 1.074 GB, free: 160.6 MB / 0.5262 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.1397/2.241, allocations: 140.7 MB / 1.211 GB, free: 23.07 MB / 0.5262 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.01478/2.256, allocations: 18.34 MB / 1.229 GB, free: 4.68 MB / 0.5262 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.1734/2.43, allocations: 10.27 MB / 1.239 GB, free: 172.1 MB / 0.5262 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.06573/2.495, allocations: 45.28 MB / 1.283 GB, free: 159.5 MB / 0.5262 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001475/2.495, allocations: 268.6 kB / 1.284 GB, free: 159.3 MB / 0.5262 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.01865/2.514, allocations: 6.802 MB / 1.29 GB, free: 158.1 MB / 0.5262 GB
Notification: Performance of pre-optimization done (n=3091): time 7.819e-05/2.514, allocations: 0 / 1.29 GB, free: 158.1 MB / 0.5262 GB
Notification: Performance of matching and sorting (n=3091): time 0.0895/2.604, allocations: 48.24 MB / 1.337 GB, free: 115 MB / 0.5262 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001157/2.604, allocations: 281.2 kB / 1.338 GB, free: 114.7 MB / 0.5262 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.009197/2.613, allocations: 11.15 MB / 1.349 GB, free: 105.5 MB / 0.5262 GB
Notification: Performance of collectPreVariables (initialization): time 0.004571/2.618, allocations: 421.7 kB / 1.349 GB, free: 105.1 MB / 0.5262 GB
Notification: Performance of collectInitialEqns (initialization): time 0.002839/2.62, allocations: 10.44 MB / 1.359 GB, free: 95.21 MB / 0.5262 GB
Notification: Performance of collectInitialBindings (initialization): time 0.0077/2.628, allocations: 10.99 MB / 1.37 GB, free: 84.87 MB / 0.5262 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.008176/2.636, allocations: 6.502 MB / 1.376 GB, free: 79.16 MB / 0.5262 GB
Notification: Performance of setup shared object (initialization): time 2.96e-05/2.636, allocations: 305.1 kB / 1.377 GB, free: 78.86 MB / 0.5262 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.01507/2.651, allocations: 11.62 MB / 1.388 GB, free: 67.23 MB / 0.5262 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.01825/2.67, allocations: 21.68 MB / 1.409 GB, free: 41.84 MB / 0.5262 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.2317/2.901, allocations: 54.31 MB / 1.462 GB, free: 137.5 MB / 0.5262 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0002784/2.902, allocations: 100 kB / 1.462 GB, free: 137.4 MB / 0.5262 GB
Notification: Performance of matching and sorting (n=4958) (initialization): time 0.08112/2.983, allocations: 40.82 MB / 1.502 GB, free: 103.8 MB / 0.5262 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0001845/2.983, allocations: 152.8 kB / 1.502 GB, free: 103.6 MB / 0.5262 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0004001/2.983, allocations: 348.1 kB / 1.503 GB, free: 103.3 MB / 0.5262 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.09389/3.077, allocations: 15.01 MB / 1.517 GB, free: 91.44 MB / 0.5262 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.02336/3.1, allocations: 7.742 MB / 1.525 GB, free: 83.69 MB / 0.5262 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.005251/3.106, allocations: 11.67 MB / 1.536 GB, free: 71.62 MB / 0.5262 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01452/3.12, allocations: 1.114 MB / 1.537 GB, free: 70.57 MB / 0.5262 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.004619/3.125, allocations: 2.022 MB / 1.539 GB, free: 68.55 MB / 0.5262 GB
Warning: Assuming fixed start value for the following 18 variables:
         pulmonaryArteries.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[1]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[2]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[3]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[1]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[2]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[3]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1567
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (4024):
 * Single equations (assignments): 3985
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (4,28), (1,1), (1,3), (6,9), (1,3), (1,1), (5,10), (1,3), (6,9), (1,3), (1,2), (5,10), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.009685/3.135, allocations: 2.311 MB / 1.542 GB, free: 66.45 MB / 0.5262 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.004354/3.139, allocations: 1.663 MB / 1.543 GB, free: 64.79 MB / 0.5262 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.08632/3.225, allocations: 39.75 MB / 1.582 GB, free: 25.42 MB / 0.5262 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.2571/3.482, allocations: 27.35 MB / 1.609 GB, free: 134.3 MB / 0.5262 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.403e-05/3.482, allocations: 0.6094 kB / 1.609 GB, free: 134.3 MB / 0.5262 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0004514/3.483, allocations: 121.4 kB / 1.609 GB, free: 134.3 MB / 0.5262 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.118/3.601, allocations: 61.42 MB / 1.669 GB, free: 121.5 MB / 0.5262 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001062/3.601, allocations: 0 / 1.669 GB, free: 121.5 MB / 0.5262 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01729/3.618, allocations: 5.333 MB / 1.674 GB, free: 121.3 MB / 0.5262 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0717/3.69, allocations: 12.18 MB / 1.686 GB, free: 113.7 MB / 0.5262 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.004814/3.695, allocations: 0.7837 MB / 1.687 GB, free: 113 MB / 0.5262 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.006375/3.701, allocations: 11.8 MB / 1.698 GB, free: 101.2 MB / 0.5262 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.214e-06/3.701, allocations: 0 / 1.698 GB, free: 101.2 MB / 0.5262 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.09173/3.793, allocations: 54.22 MB / 1.751 GB, free: 47.68 MB / 0.5262 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.01306/3.806, allocations: 4.943 MB / 1.756 GB, free: 43.59 MB / 0.5262 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.006739/3.813, allocations: 0.6521 MB / 1.757 GB, free: 42.93 MB / 0.5262 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01182/3.824, allocations: 0.539 MB / 1.757 GB, free: 42.39 MB / 0.5262 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.006478/3.831, allocations: 2.105 MB / 1.759 GB, free: 40.29 MB / 0.5262 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.004174/3.835, allocations: 1.09 MB / 1.76 GB, free: 39.2 MB / 0.5262 GB
Notification: Performance of sorting global known variables: time 0.005118/3.84, allocations: 4.468 MB / 1.765 GB, free: 35.28 MB / 0.5262 GB
Notification: Performance of sort global known variables: time 4.61e-07/3.84, allocations: 4 kB / 1.765 GB, free: 35.27 MB / 0.5262 GB
Notification: Performance of remove unused functions: time 0.02653/3.867, allocations: 12.03 MB / 1.776 GB, free: 23.56 MB / 0.5262 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 263 (pulmonaryArteries.enthalpy,pulmonaryArteries.extraSubstanceAmounts[1],pulmonaryArteries.extraSubstanceAmounts[2],pulmonaryArteries.extraSubstanceAmounts[3],pulmonaryArteries.substanceMasses[1],pulmonaryArteries.substanceMasses[2],pulmonaryArteries.substanceMasses[3],pulmonaryArteries.substanceMasses[4],pulmonaryArteries.substanceMasses[5],pulmonaryArteries.substanceMasses[6],pulmonaryArteries.substanceMasses[7],pulmonaryArteries.substanceMasses[8],pulmonaryArteries.substanceMasses[9],pulmonaryArteries.substanceMasses[10],pulmonaryArteries.substanceMasses[11],pulmonaryArteries.substanceMasses[12],pulmonaryArteries.substanceMasses[13],pulmonaryArteries.substanceMasses[14],pulmonaryArteries.substanceMasses[15],pulmonaryArteries.substanceMasses[16],pulmonaryArteries.substanceMasses[17],pulmonaryArteries.substanceMasses[18],pulmonaryArteries.substanceMasses[19],pulmonaryArteries.substanceMasses[20],pulmonaryArteries.substanceMasses[21],pulmonaryArteries.substanceMasses[22],pulmonaryArteries.substanceMasses[23],pulmonaryArteries.substanceMasses[24],pulmonaryArteries.substanceMasses[25],pulmonaryArteries.substanceMasses[26],pulmonaryArteries.substanceMasses[27],pulmonaryArteries.substanceMasses[28],pulmonaryArteries.substanceMasses[29],pulmonaryArteries.substanceMasses[30],pulmonaryArteries.substanceMasses[31],pulmonaryArteries.substanceMasses[32],pulmonaryArteries.substanceMasses[33],pulmonaryArteries.substanceMasses[34],pulmonaryArteries.substanceMasses[35],pulmonaryArteries.substanceMasses[36],pulmonaryArteries.substanceMasses[37],pulmonaryArteries.substanceMasses[38],pulmonaryArteries.substanceMasses[39],pulmonaryVeins.enthalpy,pulmonaryVeins.extraSubstanceAmounts[1],pulmonaryVeins.extraSubstanceAmounts[2],pulmonaryVeins.extraSubstanceAmounts[3],pulmonaryVeins.substanceMasses[1],pulmonaryVeins.substanceMasses[2],pulmonaryVeins.substanceMasses[3],pulmonaryVeins.substanceMasses[4],pulmonaryVeins.substanceMasses[5],pulmonaryVeins.substanceMasses[6],pulmonaryVeins.substanceMasses[7],pulmonaryVeins.substanceMasses[8],pulmonaryVeins.substanceMasses[9],pulmonaryVeins.substanceMasses[10],pulmonaryVeins.substanceMasses[11],pulmonaryVeins.substanceMasses[12],pulmonaryVeins.substanceMasses[13],pulmonaryVeins.substanceMasses[14],pulmonaryVeins.substanceMasses[15],pulmonaryVeins.substanceMasses[16],pulmonaryVeins.substanceMasses[17],pulmonaryVeins.substanceMasses[18],pulmonaryVeins.substanceMasses[19],pulmonaryVeins.substanceMasses[20],pulmonaryVeins.substanceMasses[21],pulmonaryVeins.substanceMasses[22],pulmonaryVeins.substanceMasses[23],pulmonaryVeins.substanceMasses[24],pulmonaryVeins.substanceMasses[25],pulmonaryVeins.substanceMasses[26],pulmonaryVeins.substanceMasses[27],pulmonaryVeins.substanceMasses[28],pulmonaryVeins.substanceMasses[29],pulmonaryVeins.substanceMasses[30],pulmonaryVeins.substanceMasses[31],pulmonaryVeins.substanceMasses[32],pulmonaryVeins.substanceMasses[33],pulmonaryVeins.substanceMasses[34],pulmonaryVeins.substanceMasses[35],pulmonaryVeins.substanceMasses[36],pulmonaryVeins.substanceMasses[37],pulmonaryVeins.substanceMasses[38],pulmonaryVeins.substanceMasses[39],systemicArteries.chemicalSolution.substanceMasses[1],systemicArteries.chemicalSolution.substanceMasses[2],systemicArteries.chemicalSolution.substanceMasses[3],systemicArteries.chemicalSolution.substanceMasses[4],systemicArteries.chemicalSolution.substanceMasses[5],systemicArteries.chemicalSolution.substanceMasses[6],systemicArteries.chemicalSolution.substanceMasses[7],systemicArteries.chemicalSolution.substanceMasses[8],systemicArteries.chemicalSolution.substanceMasses[9],systemicArteries.chemicalSolution.substanceMasses[10],systemicArteries.chemicalSolution.substanceMasses[11],systemicArteries.chemicalSolution.substanceMasses[12],systemicArteries.chemicalSolution.substanceMasses[13],systemicArteries.chemicalSolution.substanceMasses[14],systemicArteries.chemicalSolution.substanceMasses[15],systemicArteries.chemicalSolution.substanceMasses[16],systemicArteries.chemicalSolution.substanceMasses[17],systemicArteries.chemicalSolution.substanceMasses[18],systemicArteries.chemicalSolution.substanceMasses[19],systemicArteries.chemicalSolution.substanceMasses[20],systemicArteries.chemicalSolution.substanceMasses[21],systemicArteries.chemicalSolution.substanceMasses[22],systemicArteries.chemicalSolution.substanceMasses[23],systemicArteries.chemicalSolution.substanceMasses[24],systemicArteries.chemicalSolution.substanceMasses[25],systemicArteries.chemicalSolution.substanceMasses[26],systemicArteries.chemicalSolution.substanceMasses[27],systemicArteries.chemicalSolution.substanceMasses[28],systemicArteries.chemicalSolution.substanceMasses[29],systemicArteries.chemicalSolution.substanceMasses[30],systemicArteries.chemicalSolution.substanceMasses[31],systemicArteries.chemicalSolution.substanceMasses[32],systemicArteries.chemicalSolution.substanceMasses[33],systemicArteries.chemicalSolution.substanceMasses[34],systemicArteries.chemicalSolution.substanceMasses[35],systemicArteries.chemicalSolution.substanceMasses[36],systemicArteries.chemicalSolution.substanceMasses[37],systemicArteries.chemicalSolution.substanceMasses[38],systemicArteries.chemicalSolution.substanceMasses[39],systemicArteries.enthalpy,systemicArteries.extraSubstanceAmounts[1],systemicArteries.extraSubstanceAmounts[2],systemicArteries.extraSubstanceAmounts[3],systemicVeins.chemicalSolution.substanceMasses[1],systemicVeins.chemicalSolution.substanceMasses[2],systemicVeins.chemicalSolution.substanceMasses[3],systemicVeins.chemicalSolution.substanceMasses[4],systemicVeins.chemicalSolution.substanceMasses[5],systemicVeins.chemicalSolution.substanceMasses[6],systemicVeins.chemicalSolution.substanceMasses[7],systemicVeins.chemicalSolution.substanceMasses[8],systemicVeins.chemicalSolution.substanceMasses[9],systemicVeins.chemicalSolution.substanceMasses[10],systemicVeins.chemicalSolution.substanceMasses[11],systemicVeins.chemicalSolution.substanceMasses[12],systemicVeins.chemicalSolution.substanceMasses[13],systemicVeins.chemicalSolution.substanceMasses[14],systemicVeins.chemicalSolution.substanceMasses[15],systemicVeins.chemicalSolution.substanceMasses[16],systemicVeins.chemicalSolution.substanceMasses[17],systemicVeins.chemicalSolution.substanceMasses[18],systemicVeins.chemicalSolution.substanceMasses[19],systemicVeins.chemicalSolution.substanceMasses[20],systemicVeins.chemicalSolution.substanceMasses[21],systemicVeins.chemicalSolution.substanceMasses[22],systemicVeins.chemicalSolution.substanceMasses[23],systemicVeins.chemicalSolution.substanceMasses[24],systemicVeins.chemicalSolution.substanceMasses[25],systemicVeins.chemicalSolution.substanceMasses[26],systemicVeins.chemicalSolution.substanceMasses[27],systemicVeins.chemicalSolution.substanceMasses[28],systemicVeins.chemicalSolution.substanceMasses[29],systemicVeins.chemicalSolution.substanceMasses[30],systemicVeins.chemicalSolution.substanceMasses[31],systemicVeins.chemicalSolution.substanceMasses[32],systemicVeins.chemicalSolution.substanceMasses[33],systemicVeins.chemicalSolution.substanceMasses[34],systemicVeins.chemicalSolution.substanceMasses[35],systemicVeins.chemicalSolution.substanceMasses[36],systemicVeins.chemicalSolution.substanceMasses[37],systemicVeins.chemicalSolution.substanceMasses[38],systemicVeins.chemicalSolution.substanceMasses[39],systemicVeins.enthalpy,systemicVeins.extraSubstanceAmounts[1],systemicVeins.extraSubstanceAmounts[2],systemicVeins.extraSubstanceAmounts[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[1],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[2],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[4],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[5],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[6],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[7],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[8],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[9],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[10],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[11],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[12],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[13],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[14],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[15],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[16],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[17],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[18],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[19],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[20],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[21],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[22],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[23],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[24],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[25],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[26],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[27],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[28],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[29],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[30],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[31],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[32],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[33],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[34],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[35],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[36],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[37],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[38],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[39],respiratoryUnit[1].pulmCapysVentilated.enthalpy,respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[1],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[2],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[4],respiratoryUnit[1].alveoli.enthalpy,tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[1],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[2],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[3],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[4],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[5],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[6],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[7],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[8],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[9],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[10],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[11],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[12],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[13],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[14],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[15],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[16],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[17],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[18],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[19],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[20],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[21],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[22],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[23],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[24],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[25],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[26],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[27],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[28],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[29],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[30],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[31],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[32],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[33],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[34],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[35],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[36],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[37],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[38],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[39],tissueUnit[1].systemicCapillaries.enthalpy,tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (2862):
 * Single equations (assignments): 2827
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 16
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (9,30), (1,1), (1,4), (5,11), (1,4), (1,1), (5,11), (1,4), (5,11), (1,4), (1,3), (6,10), (1,4)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.006093/3.873, allocations: 2.732 MB / 1.779 GB, free: 21.2 MB / 0.5262 GB
Notification: Performance of simCode: created initialization part: time 0.1819/4.055, allocations: 31.5 MB / 1.81 GB, free: 170.5 MB / 0.5418 GB
Notification: Performance of simCode: created event and clocks part: time 0.0005331/4.055, allocations: 251.3 kB / 1.81 GB, free: 170.5 MB / 0.5418 GB
Notification: Performance of simCode: created simulation system equations: time 0.0183/4.074, allocations: 14.86 MB / 1.825 GB, free: 168.9 MB / 0.5418 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.04475/4.118, allocations: 16.33 MB / 1.84 GB, free: 166.7 MB / 0.5418 GB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/kg: Unit not found
Error: Error parsing unit %: Parse error
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kDa: Unit not found
Error: Error parsing unit l/(cmH2O.s): Unit not found
Error: Error parsing unit meq/min: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.09493/4.213, allocations: 69.58 MB / 1.908 GB, free: 118.3 MB / 0.5418 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0127/4.226, allocations: 7.664 MB / 1.916 GB, free: 111.5 MB / 0.5418 GB
Notification: Performance of simCode: alias equations: time 0.02314/4.249, allocations: 4.895 MB / 1.921 GB, free: 106.6 MB / 0.5418 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.03642/4.285, allocations: 9.03 MB / 1.93 GB, free: 97.52 MB / 0.5418 GB
Notification: Performance of SimCode: time 1.853e-06/4.285, allocations: 3.828 kB / 1.93 GB, free: 97.52 MB / 0.5418 GB
Notification: Performance of Templates: time 1.348/5.634, allocations: 0.7951 GB / 2.725 GB, free: 45.36 MB / 0.5418 GB
"
[Timeout remaining time 654]
make -j1 -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.makefile [Timeout 660]
(rm -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; mkfifo Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe >> ../files/Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.sim & ./Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS > Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 30.07804679637775]