Environment - simulationEnvironment:
startTime=0
stopTime=864000
tolerance=1e-06
numberOfIntervals=864000
stepSize=1
Regular simulation: ./Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS
LOG_STDOUT        | warning | Numerical Jacobians without coloring are currently not supported by GBODE. Colored numerical Jacobian will be used.
LOG_SUCCESS       | info    | The initialization finished successfully without homotopy method.
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialCompartment.mo:18:3-18:49:writable]
|                 | |       | The following assertion has been violated at time 735.000000
|                 | |       | ((dose.absorptionLumen.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= dose.absorptionLumen.M, has value: -3.02822e-12"
LOG_STATS         | info    | gbode (single-rate integration): radauIIA3
LOG_STATS         | info    | ### STATISTICS ###
|                 | |       | | timer
|                 | |       | | |            0s          reading init.xml
|                 | |       | | |            0s          reading info.xml
|                 | |       | | |   6.8138e-05s [  0.0%] pre-initialization
|                 | |       | | |   5.5996e-05s [  0.0%] initialization
|                 | |       | | |            0s [  0.0%] steps
|                 | |       | | |            0s [  0.0%] solver (excl. callbacks)
|                 | |       | | |    1.402e-06s [  0.0%] creating output-file
|                 | |       | | |  0.000228222s [  0.0%] event-handling
|                 | |       | | |            0s [  0.0%] overhead
|                 | |       | | |      2.20136s [100.0%] simulation
|                 | |       | | |      2.20171s [100.0%] total
|                 | |       | | events
|                 | |       | | |    43 state events
|                 | |       | | |    20 time events
|                 | |       | | solver: gbode
|                 | |       | | |   325 steps taken
|                 | |       | | |  1410 calls of functionODE
|                 | |       | | |    72 evaluations of jacobian
|                 | |       | | |    10 error test failures
|                 | |       | | |     0 convergence test failures
|                 | |       | | | 0s time of jacobian evaluation
LOG_SUCCESS       | info    | The simulation finished successfully.