Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001235/0.001235, allocations: 80.88 kB / 19.94 MB, free: 4.551 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001456/0.001456, allocations: 177 kB / 23.36 MB, free: 1.137 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.034/1.034, allocations: 177.2 MB / 203.8 MB, free: 5.461 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.69/1.69, allocations: 273.5 MB / 0.5213 GB, free: 14.66 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic") translateModel(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic,tolerance=1e-06,outputFormat="empty",numberOfIntervals=86400,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.424e-06/2.424e-06, allocations: 0 / 0.5954 GB, free: 2.691 MB / 0.5105 GB Notification: Performance of FrontEnd - Absyn->SCode: time 2.484e-05/2.726e-05, allocations: 7.109 kB / 0.5955 GB, free: 2.688 MB / 0.5105 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic): time 0.01146/0.01149, allocations: 15.07 MB / 0.6102 GB, free: 3.664 MB / 0.5261 GB Notification: Performance of NFInst.instExpressions: time 0.007624/0.01911, allocations: 3.569 MB / 0.6137 GB, free: 96 kB / 0.5261 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.002582/0.0217, allocations: 31.94 kB / 0.6137 GB, free: 64 kB / 0.5261 GB Notification: Performance of NFTyping.typeComponents: time 0.4047/0.4264, allocations: 0.502 MB / 0.6142 GB, free: 41.67 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.003363/0.4297, allocations: 1.095 MB / 0.6152 GB, free: 41.46 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.001899/0.4316, allocations: 0.9207 MB / 0.6161 GB, free: 41.46 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.005439/0.4371, allocations: 3.884 MB / 0.6199 GB, free: 40.39 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.001086/0.4382, allocations: 0.5614 MB / 0.6205 GB, free: 40.26 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.003459/0.4416, allocations: 1.957 MB / 0.6224 GB, free: 39.57 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.001767/0.4434, allocations: 1.166 MB / 0.6235 GB, free: 39.22 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0004455/0.4438, allocations: 330.9 kB / 0.6239 GB, free: 39.22 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0007094/0.4445, allocations: 485.2 kB / 0.6243 GB, free: 39.2 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 0.0003547/0.4449, allocations: 0.7099 MB / 0.625 GB, free: 38.77 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.0009703/0.4459, allocations: 1.121 MB / 0.6261 GB, free: 38.29 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.002801/0.4487, allocations: 2.668 MB / 0.6287 GB, free: 36.92 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 6.513e-06/0.4487, allocations: 5.828 kB / 0.6287 GB, free: 36.91 MB / 0.5262 GB Notification: Performance of FrontEnd: time 1.222e-06/0.4487, allocations: 0 / 0.6287 GB, free: 36.91 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 5.609e-05/0.4487, allocations: 0.5 kB / 0.6287 GB, free: 36.91 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 486 * Number of variables: 486 Notification: Performance of Generate backend data structure: time 0.00322/0.4519, allocations: 4.166 MB / 0.6328 GB, free: 33.61 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 3.995e-05/0.452, allocations: 9.781 kB / 0.6328 GB, free: 33.61 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001166/0.4531, allocations: 0.7919 MB / 0.6336 GB, free: 33.28 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.001227/0.4544, allocations: 0.9402 MB / 0.6345 GB, free: 32.69 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001143/0.4545, allocations: 141.4 kB / 0.6346 GB, free: 32.64 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002576/0.4547, allocations: 228.5 kB / 0.6348 GB, free: 32.56 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.001741/0.4565, allocations: 2.33 MB / 0.6371 GB, free: 30.75 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 7.334e-05/0.4566, allocations: 30.03 kB / 0.6371 GB, free: 30.73 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 9.537e-05/0.4567, allocations: 81.34 kB / 0.6372 GB, free: 30.68 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.947e-05/0.4567, allocations: 43.75 kB / 0.6373 GB, free: 30.68 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.00112/0.4578, allocations: 1.67 MB / 0.6389 GB, free: 29.4 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.005029/0.4628, allocations: 4.117 MB / 0.6429 GB, free: 26.81 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.001309/0.4641, allocations: 2.018 MB / 0.6449 GB, free: 25.24 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0006235/0.4648, allocations: 1.259 MB / 0.6461 GB, free: 24.1 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 6.971e-05/0.4648, allocations: 39.5 kB / 0.6461 GB, free: 24.1 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001355/0.4662, allocations: 3.063 MB / 0.6491 GB, free: 21.29 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=300): time 4.188e-06/0.4662, allocations: 0 / 0.6491 GB, free: 21.29 MB / 0.5262 GB Notification: Performance of matching and sorting (n=318): time 0.007667/0.4739, allocations: 9.132 MB / 0.6581 GB, free: 14.17 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0002997/0.4742, allocations: 1.983 MB / 0.66 GB, free: 11.82 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001274/0.4754, allocations: 1.508 MB / 0.6615 GB, free: 11.27 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 0.0001869/0.4756, allocations: 123.9 kB / 0.6616 GB, free: 11.18 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0002902/0.4759, allocations: 0.6594 MB / 0.6622 GB, free: 10.73 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.000434/0.4763, allocations: 1.028 MB / 0.6632 GB, free: 9.926 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0004717/0.4768, allocations: 0.5435 MB / 0.6638 GB, free: 9.695 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 2.88e-05/0.4768, allocations: 308 kB / 0.6641 GB, free: 9.398 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0007005/0.4775, allocations: 1.505 MB / 0.6655 GB, free: 8.066 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.00084/0.4784, allocations: 2.285 MB / 0.6678 GB, free: 5.738 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.00213/0.4805, allocations: 5.097 MB / 0.6727 GB, free: 15.96 MB / 0.5418 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.606e-05/0.4805, allocations: 4 kB / 0.6727 GB, free: 15.96 MB / 0.5418 GB Notification: Performance of matching and sorting (n=462) (initialization): time 0.003716/0.4843, allocations: 4.061 MB / 0.6767 GB, free: 11.6 MB / 0.5418 GB Notification: Performance of prepare postOptimizeDAE: time 0.0003615/0.4846, allocations: 1.013 MB / 0.6777 GB, free: 10.37 MB / 0.5418 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.452e-05/0.4846, allocations: 21.28 kB / 0.6777 GB, free: 10.35 MB / 0.5418 GB Notification: Performance of postOpt tearingSystem (initialization): time 4.318e-05/0.4847, allocations: 41.69 kB / 0.6778 GB, free: 10.31 MB / 0.5418 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001634/0.4863, allocations: 0.841 MB / 0.6786 GB, free: 9.527 MB / 0.5418 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.085e-05/0.4863, allocations: 51.14 kB / 0.6786 GB, free: 9.488 MB / 0.5418 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001297/0.4876, allocations: 152.6 kB / 0.6788 GB, free: 9.344 MB / 0.5418 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0002997/0.4879, allocations: 381.3 kB / 0.6791 GB, free: 8.977 MB / 0.5418 GB Warning: Assuming fixed start value for the following 84 variables: patient_high.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_high.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_high.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_high.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_high.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_low.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_low.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_low.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient_low.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient_low.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real patient.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real patient.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref_high.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref_high.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real ref_high.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref_high.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real ref_high.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref_low.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref_low.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real ref_low.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref_low.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real ref_low.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real ref.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real ref.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real ref.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_low.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_low.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_low.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_low.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_low.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_low.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_high.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_high.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_high.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_high.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_high.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real ref_high.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_low.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_low.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_low.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_low.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_low.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_low.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real patient_high.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_high.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_high.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_low.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_low.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient_low.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean patient.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref_high.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref_high.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref_high.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref_low.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref_low.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref_low.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean ref.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 96 * Number of states: 0 () * Number of discrete variables: 186 ($PRE.ref.peripheral.Cmin,ref.peripheral.Cmin,$PRE.ref.peripheral.Cmax,ref.peripheral.Cmax,$PRE.ref.periodicDose.absorptionLumen.Cmin,ref.periodicDose.absorptionLumen.Cmin,$PRE.ref.periodicDose.absorptionLumen.Cmax,ref.periodicDose.absorptionLumen.Cmax,$PRE.ref.central.Cmin,ref.central.Cmin,$PRE.ref.central.Cmax,ref.central.Cmax,$PRE.ref_low.peripheral.Cmin,ref_low.peripheral.Cmin,$PRE.ref_low.peripheral.Cmax,ref_low.peripheral.Cmax,$PRE.ref_low.periodicDose.absorptionLumen.Cmin,ref_low.periodicDose.absorptionLumen.Cmin,$PRE.ref_low.periodicDose.absorptionLumen.Cmax,ref_low.periodicDose.absorptionLumen.Cmax,$PRE.ref_low.central.Cmin,ref_low.central.Cmin,$PRE.ref_low.central.Cmax,ref_low.central.Cmax,$PRE.ref_high.peripheral.Cmin,ref_high.peripheral.Cmin,$PRE.ref_high.peripheral.Cmax,ref_high.peripheral.Cmax,$PRE.ref_high.periodicDose.absorptionLumen.Cmin,ref_high.periodicDose.absorptionLumen.Cmin,$PRE.ref_high.periodicDose.absorptionLumen.Cmax,ref_high.periodicDose.absorptionLumen.Cmax,$PRE.ref_high.central.Cmin,ref_high.central.Cmin,$PRE.ref_high.central.Cmax,ref_high.central.Cmax,$PRE.patient.peripheral.Cmin,patient.peripheral.Cmin,$PRE.patient.peripheral.Cmax,patient.peripheral.Cmax,$PRE.patient.periodicDose.absorptionLumen.Cmin,patient.periodicDose.absorptionLumen.Cmin,$PRE.patient.periodicDose.absorptionLumen.Cmax,patient.periodicDose.absorptionLumen.Cmax,$PRE.patient.central.Cmin,patient.central.Cmin,$PRE.patient.central.Cmax,patient.central.Cmax,$PRE.patient_low.peripheral.Cmin,patient_low.peripheral.Cmin,$PRE.patient_low.peripheral.Cmax,patient_low.peripheral.Cmax,$PRE.patient_low.periodicDose.absorptionLumen.Cmin,patient_low.periodicDose.absorptionLumen.Cmin,$PRE.patient_low.periodicDose.absorptionLumen.Cmax,patient_low.periodicDose.absorptionLumen.Cmax,$PRE.patient_low.central.Cmin,patient_low.central.Cmin,$PRE.patient_low.central.Cmax,patient_low.central.Cmax,$PRE.patient_high.peripheral.Cmin,patient_high.peripheral.Cmin,$PRE.patient_high.peripheral.Cmax,patient_high.peripheral.Cmax,$PRE.patient_high.periodicDose.absorptionLumen.Cmin,patient_high.periodicDose.absorptionLumen.Cmin,$PRE.patient_high.periodicDose.absorptionLumen.Cmax,patient_high.periodicDose.absorptionLumen.Cmax,$PRE.patient_high.central.Cmin,patient_high.central.Cmin,$PRE.patient_high.central.Cmax,patient_high.central.Cmax,$PRE.patient_high.peripheral.rising,$PRE.patient_high.periodicDose.pulse.count,$PRE.patient_high.periodicDose.pulse.T_start,$PRE.patient_high.periodicDose.absorptionLumen.rising,$PRE.patient_high.central.rising,patient_high.CYP2C19.status,patient_high.SLC22A2.status,patient_high.peripheral.rising,patient_high.periodicDose.pulse.count,patient_high.periodicDose.pulse.T_start,patient_high.periodicDose.absorptionLumen.rising,patient_high.central.rising,$whenCondition6,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition7,$PRE.patient_low.peripheral.rising,$PRE.patient_low.periodicDose.pulse.count,$PRE.patient_low.periodicDose.pulse.T_start,$PRE.patient_low.periodicDose.absorptionLumen.rising,$PRE.patient_low.central.rising,patient_low.CYP2C19.status,patient_low.SLC22A2.status,patient_low.peripheral.rising,patient_low.periodicDose.pulse.count,patient_low.periodicDose.pulse.T_start,patient_low.periodicDose.absorptionLumen.rising,patient_low.central.rising,$whenCondition13,$whenCondition12,$whenCondition11,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition14,$PRE.patient.peripheral.rising,$PRE.patient.periodicDose.pulse.count,$PRE.patient.periodicDose.pulse.T_start,$PRE.patient.periodicDose.absorptionLumen.rising,$PRE.patient.central.rising,patient.CYP2C19.status,patient.SLC22A2.status,patient.peripheral.rising,patient.periodicDose.pulse.count,patient.periodicDose.pulse.T_start,patient.periodicDose.absorptionLumen.rising,patient.central.rising,$whenCondition20,$whenCondition19,$whenCondition18,$whenCondition17,$whenCondition16,$whenCondition15,$whenCondition21,$PRE.ref_high.peripheral.rising,$PRE.ref_high.periodicDose.pulse.count,$PRE.ref_high.periodicDose.pulse.T_start,$PRE.ref_high.periodicDose.absorptionLumen.rising,$PRE.ref_high.central.rising,ref_high.CYP2C19.status,ref_high.SLC22A2.status,ref_high.peripheral.rising,ref_high.periodicDose.pulse.count,ref_high.periodicDose.pulse.T_start,ref_high.periodicDose.absorptionLumen.rising,ref_high.central.rising,$whenCondition27,$whenCondition26,$whenCondition25,$whenCondition24,$whenCondition23,$whenCondition22,$whenCondition28,$PRE.ref_low.peripheral.rising,$PRE.ref_low.periodicDose.pulse.count,$PRE.ref_low.periodicDose.pulse.T_start,$PRE.ref_low.periodicDose.absorptionLumen.rising,$PRE.ref_low.central.rising,ref_low.CYP2C19.status,ref_low.SLC22A2.status,ref_low.peripheral.rising,ref_low.periodicDose.pulse.count,ref_low.periodicDose.pulse.T_start,ref_low.periodicDose.absorptionLumen.rising,ref_low.central.rising,$whenCondition34,$whenCondition33,$whenCondition32,$whenCondition31,$whenCondition30,$whenCondition29,$whenCondition35,$PRE.ref.peripheral.rising,$PRE.ref.periodicDose.pulse.count,$PRE.ref.periodicDose.pulse.T_start,$PRE.ref.periodicDose.absorptionLumen.rising,$PRE.ref.central.rising,ref.CYP2C19.status,ref.SLC22A2.status,ref.peripheral.rising,ref.periodicDose.pulse.count,ref.periodicDose.pulse.T_start,ref.periodicDose.absorptionLumen.rising,ref.central.rising,$whenCondition41,$whenCondition40,$whenCondition39,$whenCondition38,$whenCondition37,$whenCondition36,$whenCondition42) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (426): * Single equations (assignments): 390 * Array equations: 0 * Algorithm blocks: 36 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.001481/0.4894, allocations: 1.614 MB / 0.6807 GB, free: 7.332 MB / 0.5418 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.001088/0.4905, allocations: 0.6517 MB / 0.6813 GB, free: 6.68 MB / 0.5418 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00029/0.4908, allocations: 263.5 kB / 0.6816 GB, free: 6.422 MB / 0.5418 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.655e-05/0.4908, allocations: 27.14 kB / 0.6816 GB, free: 6.398 MB / 0.5418 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 3.153e-05/0.4908, allocations: 4 kB / 0.6816 GB, free: 6.395 MB / 0.5418 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.589e-05/0.4909, allocations: 11.95 kB / 0.6816 GB, free: 6.383 MB / 0.5418 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.004625/0.4955, allocations: 5.278 MB / 0.6868 GB, free: 0.9648 MB / 0.5418 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.143e-06/0.4955, allocations: 3.469 kB / 0.6868 GB, free: 0.9648 MB / 0.5418 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.001402/0.4969, allocations: 0.5824 MB / 0.6874 GB, free: 424 kB / 0.5418 GB Notification: Performance of postOpt tearingSystem (simulation): time 1.127e-05/0.4969, allocations: 12 kB / 0.6874 GB, free: 412 kB / 0.5418 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001449/0.4971, allocations: 111.9 kB / 0.6875 GB, free: 300 kB / 0.5418 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 9.197e-06/0.4971, allocations: 8 kB / 0.6875 GB, free: 292 kB / 0.5418 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.864e-06/0.4971, allocations: 0 / 0.6875 GB, free: 292 kB / 0.5418 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.004385/0.5015, allocations: 6.03 MB / 0.6934 GB, free: 9.723 MB / 0.5574 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0009211/0.5024, allocations: 326.1 kB / 0.6937 GB, free: 9.402 MB / 0.5574 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.000345/0.5027, allocations: 143.4 kB / 0.6938 GB, free: 9.266 MB / 0.5574 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0007015/0.5034, allocations: 109.5 kB / 0.6939 GB, free: 9.16 MB / 0.5574 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003524/0.5038, allocations: 262.7 kB / 0.6942 GB, free: 8.906 MB / 0.5574 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0002795/0.5041, allocations: 360 kB / 0.6945 GB, free: 8.566 MB / 0.5574 GB Notification: Performance of sorting global known variables: time 0.0007469/0.5048, allocations: 0.7698 MB / 0.6953 GB, free: 7.867 MB / 0.5574 GB Notification: Performance of sort global known variables: time 3.31e-07/0.5048, allocations: 0 / 0.6953 GB, free: 7.867 MB / 0.5574 GB Notification: Performance of remove unused functions: time 0.002427/0.5072, allocations: 0.7695 MB / 0.696 GB, free: 7.098 MB / 0.5574 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 6 * Number of states: 54 (patient_high.central.C,patient_high.central.AUC,patient_high.elim.MExc,patient_high.periodicDose.TotalCumulativeMass,patient_high.periodicDose.absorptionLumen.C,patient_high.periodicDose.absorptionLumen.AUC,patient_high.periodicDose.variableDose.TotalCumulativeMass,patient_high.peripheral.C,patient_high.peripheral.AUC,patient_low.central.C,patient_low.central.AUC,patient_low.elim.MExc,patient_low.periodicDose.TotalCumulativeMass,patient_low.periodicDose.absorptionLumen.C,patient_low.periodicDose.absorptionLumen.AUC,patient_low.periodicDose.variableDose.TotalCumulativeMass,patient_low.peripheral.C,patient_low.peripheral.AUC,patient.central.C,patient.central.AUC,patient.elim.MExc,patient.periodicDose.TotalCumulativeMass,patient.periodicDose.absorptionLumen.C,patient.periodicDose.absorptionLumen.AUC,patient.periodicDose.variableDose.TotalCumulativeMass,patient.peripheral.C,patient.peripheral.AUC,ref_high.central.C,ref_high.central.AUC,ref_high.elim.MExc,ref_high.periodicDose.TotalCumulativeMass,ref_high.periodicDose.absorptionLumen.C,ref_high.periodicDose.absorptionLumen.AUC,ref_high.periodicDose.variableDose.TotalCumulativeMass,ref_high.peripheral.C,ref_high.peripheral.AUC,ref_low.central.C,ref_low.central.AUC,ref_low.elim.MExc,ref_low.periodicDose.TotalCumulativeMass,ref_low.periodicDose.absorptionLumen.C,ref_low.periodicDose.absorptionLumen.AUC,ref_low.periodicDose.variableDose.TotalCumulativeMass,ref_low.peripheral.C,ref_low.peripheral.AUC,ref.central.C,ref.central.AUC,ref.elim.MExc,ref.periodicDose.TotalCumulativeMass,ref.periodicDose.absorptionLumen.C,ref.periodicDose.absorptionLumen.AUC,ref.periodicDose.variableDose.TotalCumulativeMass,ref.peripheral.C,ref.peripheral.AUC) * Number of discrete variables: 120 ($whenCondition7,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,$whenCondition6,patient_high.central.Cmax,patient_high.central.Cmin,patient_high.central.rising,patient_high.periodicDose.absorptionLumen.Cmax,patient_high.periodicDose.absorptionLumen.Cmin,patient_high.periodicDose.absorptionLumen.rising,patient_high.periodicDose.pulse.T_start,patient_high.periodicDose.pulse.count,patient_high.peripheral.Cmax,patient_high.peripheral.Cmin,patient_high.peripheral.rising,patient_high.SLC22A2.status,patient_high.CYP2C19.status,$whenCondition14,$whenCondition8,$whenCondition9,$whenCondition10,$whenCondition11,$whenCondition12,$whenCondition13,patient_low.central.Cmax,patient_low.central.Cmin,patient_low.central.rising,patient_low.periodicDose.absorptionLumen.Cmax,patient_low.periodicDose.absorptionLumen.Cmin,patient_low.periodicDose.absorptionLumen.rising,patient_low.periodicDose.pulse.T_start,patient_low.periodicDose.pulse.count,patient_low.peripheral.Cmax,patient_low.peripheral.Cmin,patient_low.peripheral.rising,patient_low.SLC22A2.status,patient_low.CYP2C19.status,$whenCondition21,$whenCondition15,$whenCondition16,$whenCondition17,$whenCondition18,$whenCondition19,$whenCondition20,patient.central.Cmax,patient.central.Cmin,patient.central.rising,patient.periodicDose.absorptionLumen.Cmax,patient.periodicDose.absorptionLumen.Cmin,patient.periodicDose.absorptionLumen.rising,patient.periodicDose.pulse.T_start,patient.periodicDose.pulse.count,patient.peripheral.Cmax,patient.peripheral.Cmin,patient.peripheral.rising,patient.SLC22A2.status,patient.CYP2C19.status,$whenCondition28,$whenCondition22,$whenCondition23,$whenCondition24,$whenCondition25,$whenCondition26,$whenCondition27,ref_high.central.Cmax,ref_high.central.Cmin,ref_high.central.rising,ref_high.periodicDose.absorptionLumen.Cmax,ref_high.periodicDose.absorptionLumen.Cmin,ref_high.periodicDose.absorptionLumen.rising,ref_high.periodicDose.pulse.T_start,ref_high.periodicDose.pulse.count,ref_high.peripheral.Cmax,ref_high.peripheral.Cmin,ref_high.peripheral.rising,ref_high.SLC22A2.status,ref_high.CYP2C19.status,$whenCondition35,$whenCondition29,$whenCondition30,$whenCondition31,$whenCondition32,$whenCondition33,$whenCondition34,ref_low.central.Cmax,ref_low.central.Cmin,ref_low.central.rising,ref_low.periodicDose.absorptionLumen.Cmax,ref_low.periodicDose.absorptionLumen.Cmin,ref_low.periodicDose.absorptionLumen.rising,ref_low.periodicDose.pulse.T_start,ref_low.periodicDose.pulse.count,ref_low.peripheral.Cmax,ref_low.peripheral.Cmin,ref_low.peripheral.rising,ref_low.SLC22A2.status,ref_low.CYP2C19.status,$whenCondition42,$whenCondition36,$whenCondition37,$whenCondition38,$whenCondition39,$whenCondition40,$whenCondition41,ref.central.Cmax,ref.central.Cmin,ref.central.rising,ref.periodicDose.absorptionLumen.Cmax,ref.periodicDose.absorptionLumen.Cmin,ref.periodicDose.absorptionLumen.rising,ref.periodicDose.pulse.T_start,ref.periodicDose.pulse.count,ref.peripheral.Cmax,ref.peripheral.Cmin,ref.peripheral.rising,ref.SLC22A2.status,ref.CYP2C19.status) * Number of discrete states: 108 (ref.periodicDose.pulse.count,ref.CYP2C19.status,ref.SLC22A2.status,ref.peripheral.Cmin,$whenCondition41,ref.peripheral.Cmax,$whenCondition40,ref.peripheral.rising,ref.periodicDose.absorptionLumen.Cmin,$whenCondition39,ref.periodicDose.absorptionLumen.Cmax,$whenCondition38,ref.periodicDose.absorptionLumen.rising,ref.central.Cmin,$whenCondition37,ref.central.Cmax,$whenCondition36,ref.central.rising,ref_low.periodicDose.pulse.count,ref_low.CYP2C19.status,ref_low.SLC22A2.status,ref_low.peripheral.Cmin,$whenCondition34,ref_low.peripheral.Cmax,$whenCondition33,ref_low.peripheral.rising,ref_low.periodicDose.absorptionLumen.Cmin,$whenCondition32,ref_low.periodicDose.absorptionLumen.Cmax,$whenCondition31,ref_low.periodicDose.absorptionLumen.rising,ref_low.central.Cmin,$whenCondition30,ref_low.central.Cmax,$whenCondition29,ref_low.central.rising,ref_high.periodicDose.pulse.count,ref_high.CYP2C19.status,ref_high.SLC22A2.status,ref_high.peripheral.Cmin,$whenCondition27,ref_high.peripheral.Cmax,$whenCondition26,ref_high.peripheral.rising,ref_high.periodicDose.absorptionLumen.Cmin,$whenCondition25,ref_high.periodicDose.absorptionLumen.Cmax,$whenCondition24,ref_high.periodicDose.absorptionLumen.rising,ref_high.central.Cmin,$whenCondition23,ref_high.central.Cmax,$whenCondition22,ref_high.central.rising,patient.periodicDose.pulse.count,patient.CYP2C19.status,patient.SLC22A2.status,patient.peripheral.Cmin,$whenCondition20,patient.peripheral.Cmax,$whenCondition19,patient.peripheral.rising,patient.periodicDose.absorptionLumen.Cmin,$whenCondition18,patient.periodicDose.absorptionLumen.Cmax,$whenCondition17,patient.periodicDose.absorptionLumen.rising,patient.central.Cmin,$whenCondition16,patient.central.Cmax,$whenCondition15,patient.central.rising,patient_low.periodicDose.pulse.count,patient_low.CYP2C19.status,patient_low.SLC22A2.status,patient_low.peripheral.Cmin,$whenCondition13,patient_low.peripheral.Cmax,$whenCondition12,patient_low.peripheral.rising,patient_low.periodicDose.absorptionLumen.Cmin,$whenCondition11,patient_low.periodicDose.absorptionLumen.Cmax,$whenCondition10,patient_low.periodicDose.absorptionLumen.rising,patient_low.central.Cmin,$whenCondition9,patient_low.central.Cmax,$whenCondition8,patient_low.central.rising,patient_high.periodicDose.pulse.count,patient_high.CYP2C19.status,patient_high.SLC22A2.status,patient_high.peripheral.Cmin,$whenCondition6,patient_high.peripheral.Cmax,$whenCondition5,patient_high.peripheral.rising,patient_high.periodicDose.absorptionLumen.Cmin,$whenCondition4,patient_high.periodicDose.absorptionLumen.Cmax,$whenCondition3,patient_high.periodicDose.absorptionLumen.rising,patient_high.central.Cmin,$whenCondition2,patient_high.central.Cmax,$whenCondition1,patient_high.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (252): * Single equations (assignments): 210 * Array equations: 0 * Algorithm blocks: 30 * Record equations: 0 * When equations: 12 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0004996/0.5077, allocations: 406.9 kB / 0.6964 GB, free: 6.742 MB / 0.5574 GB Notification: Performance of simCode: created initialization part: time 0.003402/0.5111, allocations: 5.413 MB / 0.7017 GB, free: 0.5938 MB / 0.5574 GB Notification: Performance of simCode: created event and clocks part: time 2.92e-05/0.5112, allocations: 23.94 kB / 0.7017 GB, free: 0.5703 MB / 0.5574 GB Notification: Performance of simCode: created simulation system equations: time 0.002025/0.5132, allocations: 3.357 MB / 0.705 GB, free: 12.68 MB / 0.573 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0026/0.5158, allocations: 0.8333 MB / 0.7058 GB, free: 11.93 MB / 0.573 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008021/0.5238, allocations: 6.281 MB / 0.712 GB, free: 5.477 MB / 0.573 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0004834/0.5243, allocations: 0.5437 MB / 0.7125 GB, free: 4.902 MB / 0.573 GB Notification: Performance of simCode: alias equations: time 0.001129/0.5254, allocations: 263.4 kB / 0.7127 GB, free: 4.656 MB / 0.573 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001937/0.5274, allocations: 0.935 MB / 0.7136 GB, free: 3.715 MB / 0.573 GB Notification: Performance of SimCode: time 1.894e-06/0.5274, allocations: 4 kB / 0.7137 GB, free: 3.711 MB / 0.573 GB Notification: Performance of Templates: time 0.05683/0.5842, allocations: 50.93 MB / 0.7634 GB, free: 3.867 MB / 0.6199 GB " [Timeout remaining time 659] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 6.803915550000966]