Environment - simulationEnvironment:
startTime=0
stopTime=3600
tolerance=1e-06
numberOfIntervals=3600
stepSize=1
Regular simulation: ./Pharmacolibrary_Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS
LOG_STDOUT        | warning | Numerical Jacobians without coloring are currently not supported by GBODE. Colored numerical Jacobian will be used.
LOG_SUCCESS       | info    | The initialization finished successfully without homotopy method.
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialBloodTissueCompartment.mo:9:3-9:69:writable]
|                 | |       | The following assertion has been violated at time 61.000000
|                 | |       | ((venous.CB >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= venous.CB, has value: -4.88565e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialBloodTissueCompartment.mo:11:3-11:77:writable]
|                 | |       | The following assertion has been violated at time 61.000000
|                 | |       | ((venous.freeTissueConc >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= venous.freeTissueConc, has value: -4.88565e-09"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Interfaces/PartialBloodTissueCompartment.mo:15:3-15:33:writable]
|                 | |       | The following assertion has been violated at time 61.000000
|                 | |       | ((venous.M >= -1e-12)) --> "Variable violating min constraint: -1e-12 <= venous.M, has value: -1.95426e-11"
LOG_ASSERT        | info    | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Pharmacokinetic/FlowGround.mo:4:3-4:109:writable]
|                 | |       | The following assertion has been violated at time 61.000000
|                 | |       | ((flowGround.MassConcentration >= -1e-9)) --> "Variable violating min constraint: -1e-9 <= flowGround.MassConcentration, has value: -4.88565e-09"
LOG_STATS         | info    | gbode (single-rate integration): radauIIA3
LOG_STATS         | info    | ### STATISTICS ###
|                 | |       | | timer
|                 | |       | | |            0s          reading init.xml
|                 | |       | | |            0s          reading info.xml
|                 | |       | | |   7.6083e-05s [  0.9%] pre-initialization
|                 | |       | | |   6.7367e-05s [  0.8%] initialization
|                 | |       | | |            0s [  0.0%] steps
|                 | |       | | |            0s [  0.0%] solver (excl. callbacks)
|                 | |       | | |    2.545e-06s [  0.0%] creating output-file
|                 | |       | | |  0.000126089s [  1.4%] event-handling
|                 | |       | | |            0s [  0.0%] overhead
|                 | |       | | |   0.00864953s [ 97.0%] simulation
|                 | |       | | |   0.00892161s [100.0%] total
|                 | |       | | events
|                 | |       | | |     0 state events
|                 | |       | | |    59 time events
|                 | |       | | solver: gbode
|                 | |       | | |   247 steps taken
|                 | |       | | |  1041 calls of functionODE
|                 | |       | | |    60 evaluations of jacobian
|                 | |       | | |     0 error test failures
|                 | |       | | |     0 convergence test failures
|                 | |       | | | 0s time of jacobian evaluation
LOG_SUCCESS       | info    | The simulation finished successfully.