Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001063/0.001063, allocations: 80.94 kB / 19.94 MB, free: 4.543 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001203/0.001203, allocations: 177.4 kB / 23.36 MB, free: 1.129 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.057/1.057, allocations: 177.2 MB / 203.8 MB, free: 5.477 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.1113/0.1113, allocations: 17.39 MB / 277.7 MB, free: 11.52 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.HydrogenCombustion,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.HydrogenCombustion")
translateModel(Chemical.Obsolete.Examples.HydrogenCombustion,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.HydrogenCombustion") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.583e-06/1.583e-06, allocations: 0 / 300.7 MB, free: 1.824 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.262e-05/1.421e-05, allocations: 6.312 kB / 300.7 MB, free: 1.816 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.HydrogenCombustion): time 0.04968/0.0497, allocations: 37.85 MB / 338.5 MB, free: 14.7 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.2982/0.3479, allocations: 136.5 MB / 475 MB, free: 26.04 MB / 410.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001321/0.3492, allocations: 33.31 kB / 475 MB, free: 26.03 MB / 410.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0008787/0.3501, allocations: 375.5 kB / 475.4 MB, free: 25.87 MB / 410.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.002867/0.3529, allocations: 1.164 MB / 476.5 MB, free: 25.68 MB / 410.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.003055/0.356, allocations: 1.554 MB / 478.1 MB, free: 25.5 MB / 410.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002517/0.3585, allocations: 2.69 MB / 480.8 MB, free: 25.07 MB / 410.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001459/0.36, allocations: 1.273 MB / 482.1 MB, free: 24.9 MB / 410.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.00184/0.3618, allocations: 1.762 MB / 483.8 MB, free: 24.8 MB / 410.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.00149/0.3633, allocations: 1.154 MB / 485 MB, free: 24.71 MB / 410.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0004981/0.3638, allocations: 225.9 kB / 485.2 MB, free: 24.71 MB / 410.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.00205/0.3659, allocations: 1.058 MB / 486.3 MB, free: 24.62 MB / 410.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003421/0.3662, allocations: 0.5795 MB / 486.8 MB, free: 24.54 MB / 410.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006451/0.3668, allocations: 0.8466 MB / 487.7 MB, free: 24.46 MB / 410.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002566/0.3694, allocations: 2.964 MB / 490.6 MB, free: 24 MB / 410.7 MB
Notification: Performance of FrontEnd - DAE generated: time 7.254e-06/0.3694, allocations: 0 / 490.6 MB, free: 24 MB / 410.7 MB
Notification: Performance of FrontEnd: time 1.192e-06/0.3694, allocations: 0 / 490.6 MB, free: 24 MB / 410.7 MB
Notification: Performance of Transformations before backend: time 2.208e-05/0.3694, allocations: 0 / 490.6 MB, free: 24 MB / 410.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 492
 * Number of variables: 492
Notification: Performance of Generate backend data structure: time 0.002657/0.3721, allocations: 2.498 MB / 493.1 MB, free: 22.93 MB / 410.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.221e-05/0.3721, allocations: 12.88 kB / 493.2 MB, free: 22.92 MB / 410.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.003387/0.3755, allocations: 1.24 MB / 494.4 MB, free: 22.68 MB / 410.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001017/0.3765, allocations: 0.7145 MB / 495.1 MB, free: 22.3 MB / 410.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001308/0.3767, allocations: 256.8 kB / 495.4 MB, free: 22.18 MB / 410.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.00022/0.3769, allocations: 200 kB / 495.6 MB, free: 22.17 MB / 410.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001713/0.3786, allocations: 1.588 MB / 497.1 MB, free: 21.74 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.618e-05/0.3786, allocations: 192 / 497.1 MB, free: 21.74 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001318/0.3788, allocations: 81.28 kB / 497.2 MB, free: 21.74 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 3.692e-05/0.3788, allocations: 50.94 kB / 497.3 MB, free: 21.73 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.00141/0.3802, allocations: 1.096 MB / 498.4 MB, free: 21.46 MB / 410.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.004507/0.3847, allocations: 4.815 MB / 0.4914 GB, free: 19.07 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001463/0.3862, allocations: 1.226 MB / 0.4926 GB, free: 18.56 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0003383/0.3865, allocations: 393.6 kB / 0.493 GB, free: 18.47 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.002518/0.389, allocations: 2.461 MB / 0.4954 GB, free: 17.25 MB / 410.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.408e-05/0.3891, allocations: 52.23 kB / 0.4954 GB, free: 17.2 MB / 410.7 MB
Notification: Performance of pre-optimization done (n=132): time 2.044e-06/0.3891, allocations: 0 / 0.4954 GB, free: 17.2 MB / 410.7 MB
Notification: Performance of matching and sorting (n=174): time 0.007015/0.3961, allocations: 4.734 MB / 0.5 GB, free: 15.09 MB / 410.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 2.578e-05/0.3961, allocations: 98.45 kB / 0.5001 GB, free: 14.99 MB / 410.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0004059/0.3965, allocations: 0.8143 MB / 0.5009 GB, free: 14.65 MB / 410.7 MB
Notification: Performance of collectPreVariables (initialization): time 6.287e-05/0.3966, allocations: 57.61 kB / 0.501 GB, free: 14.59 MB / 410.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0002059/0.3968, allocations: 0.7857 MB / 0.5018 GB, free: 13.96 MB / 410.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002181/0.397, allocations: 0.6181 MB / 0.5024 GB, free: 13.45 MB / 410.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003/0.3973, allocations: 390.3 kB / 0.5027 GB, free: 13.26 MB / 410.7 MB
Notification: Performance of setup shared object (initialization): time 2.803e-05/0.3973, allocations: 303.9 kB / 0.503 GB, free: 12.96 MB / 410.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002886/0.3976, allocations: 256.6 kB / 0.5033 GB, free: 12.91 MB / 410.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0004409/0.3981, allocations: 0.8291 MB / 0.5041 GB, free: 12.17 MB / 410.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0009436/0.399, allocations: 1.352 MB / 0.5054 GB, free: 11.21 MB / 410.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.402e-06/0.399, allocations: 5.5 kB / 0.5054 GB, free: 11.21 MB / 410.7 MB
Notification: Performance of matching and sorting (n=262) (initialization): time 0.001627/0.4006, allocations: 1.511 MB / 0.5069 GB, free: 10.57 MB / 410.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.924e-05/0.4007, allocations: 13.75 kB / 0.5069 GB, free: 10.57 MB / 410.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.42e-05/0.4007, allocations: 16.5 kB / 0.5069 GB, free: 10.57 MB / 410.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.001043/0.4017, allocations: 0.5054 MB / 0.5074 GB, free: 10.35 MB / 410.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001089/0.4028, allocations: 0.5178 MB / 0.5079 GB, free: 10.21 MB / 410.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.003122/0.4059, allocations: 7.366 MB / 0.5151 GB, free: 3.457 MB / 410.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0004939/0.4064, allocations: 67.17 kB / 0.5152 GB, free: 3.418 MB / 410.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001277/0.4065, allocations: 136.4 kB / 0.5153 GB, free: 3.383 MB / 410.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 80
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (208):
 * Single equations (assignments): 202
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 6
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 3 systems
   {(1,9,100.0%), (1,11,100.0%), (1,6,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,6), (1,10), (1,12)}
Notification: Performance of prepare postOptimizeDAE: time 0.0002862/0.4068, allocations: 234.1 kB / 0.5155 GB, free: 3.172 MB / 410.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001568/0.407, allocations: 141.3 kB / 0.5156 GB, free: 3.117 MB / 410.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00191/0.4089, allocations: 1.623 MB / 0.5172 GB, free: 1.727 MB / 410.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 8.256e-06/0.4089, allocations: 20 kB / 0.5173 GB, free: 1.707 MB / 410.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.939e-06/0.4089, allocations: 7.938 kB / 0.5173 GB, free: 1.699 MB / 410.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.089e-05/0.4089, allocations: 15.89 kB / 0.5173 GB, free: 1.684 MB / 410.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002511/0.4114, allocations: 2.455 MB / 0.5197 GB, free: 15.43 MB / 426.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 5.761e-06/0.4114, allocations: 6.625 kB / 0.5197 GB, free: 15.42 MB / 426.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.001033/0.4125, allocations: 411.7 kB / 0.5201 GB, free: 15.02 MB / 426.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0009388/0.4134, allocations: 446.9 kB / 0.5205 GB, free: 14.58 MB / 426.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.807e-05/0.4135, allocations: 59.97 kB / 0.5206 GB, free: 14.52 MB / 426.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.003063/0.4166, allocations: 5.26 MB / 0.5257 GB, free: 9.004 MB / 426.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.926e-06/0.4166, allocations: 4 kB / 0.5257 GB, free: 9 MB / 426.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001846/0.4184, allocations: 1.791 MB / 0.5274 GB, free: 7.211 MB / 426.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 9.655e-05/0.4185, allocations: 130.9 kB / 0.5276 GB, free: 7.082 MB / 426.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001147/0.4186, allocations: 36 kB / 0.5276 GB, free: 7.047 MB / 426.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003263/0.419, allocations: 32 kB / 0.5276 GB, free: 7.016 MB / 426.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002098/0.4192, allocations: 169.6 kB / 0.5278 GB, free: 6.848 MB / 426.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001029/0.4193, allocations: 99.89 kB / 0.5279 GB, free: 6.75 MB / 426.7 MB
Notification: Performance of sorting global known variables: time 0.000244/0.4195, allocations: 374 kB / 0.5282 GB, free: 6.422 MB / 426.7 MB
Notification: Performance of sort global known variables: time 7e-08/0.4195, allocations: 0 / 0.5282 GB, free: 6.422 MB / 426.7 MB
Notification: Performance of remove unused functions: time 0.001219/0.4207, allocations: 0.6322 MB / 0.5289 GB, free: 5.789 MB / 426.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 6
 * Number of states: 8 (H2_gas.logn,O2_gas.logn,H2O_gas.molarVolume,H2O_gas.logn,H2_gas1.logn,O2_gas1.logn,H2O_gas1.molarVolume,H2O_gas1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (153):
 * Single equations (assignments): 148
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 5
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 3 systems
   {(1,9,100.0%), (1,6,100.0%), (1,7,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,10), (1,8)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.000583/0.4213, allocations: 423.2 kB / 0.5293 GB, free: 5.402 MB / 426.7 MB
Notification: Performance of simCode: created initialization part: time 0.001526/0.4228, allocations: 1.706 MB / 0.5309 GB, free: 3.676 MB / 426.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.179e-05/0.4229, allocations: 17.81 kB / 0.531 GB, free: 3.656 MB / 426.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0009569/0.4238, allocations: 1.037 MB / 0.532 GB, free: 2.598 MB / 426.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007755/0.4246, allocations: 322.5 kB / 0.5323 GB, free: 2.316 MB / 426.7 MB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.00391/0.4285, allocations: 3.148 MB / 0.5353 GB, free: 15.15 MB / 442.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.00028/0.4288, allocations: 370.6 kB / 0.5357 GB, free: 14.76 MB / 442.7 MB
Notification: Performance of simCode: alias equations: time 0.0008645/0.4297, allocations: 411.7 kB / 0.5361 GB, free: 14.38 MB / 442.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0008256/0.4305, allocations: 490.9 kB / 0.5366 GB, free: 13.9 MB / 442.7 MB
Notification: Performance of SimCode: time 8.72e-07/0.4305, allocations: 0 / 0.5366 GB, free: 13.9 MB / 442.7 MB
Notification: Performance of Templates: time 0.03659/0.4671, allocations: 33.65 MB / 0.5694 GB, free: 12.73 MB / 474.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.sim & ./Chemical_Chemical.Obsolete.Examples.HydrogenCombustion -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.441135796718299]