Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.ExothermicReaction.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009475/0.0009475, allocations: 80.75 kB / 19.94 MB, free: 4.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001032/0.001032, allocations: 181 kB / 23.36 MB, free: 1.133 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.004/1.004, allocations: 177.1 MB / 203.8 MB, free: 5.469 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.09791/0.09791, allocations: 17.38 MB / 277.6 MB, free: 11.52 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.ExothermicReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.ExothermicReaction")
translateModel(Chemical.Obsolete.Examples.ExothermicReaction,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.ExothermicReaction") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.042e-06/1.042e-06, allocations: 0 / 300.6 MB, free: 1.836 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 9.278e-06/1.032e-05, allocations: 4.453 kB / 300.7 MB, free: 1.832 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.ExothermicReaction): time 0.007167/0.007177, allocations: 8.473 MB / 309.1 MB, free: 11.83 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.02156/0.02874, allocations: 23.21 MB / 332.3 MB, free: 4.555 MB / 298.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001406/0.03014, allocations: 31.75 kB / 332.4 MB, free: 4.523 MB / 298.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.001031/0.03117, allocations: 500 kB / 332.9 MB, free: 4.031 MB / 298.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.004475/0.03565, allocations: 2.07 MB / 334.9 MB, free: 1.945 MB / 298.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.007106/0.04276, allocations: 3.141 MB / 338.1 MB, free: 14.79 MB / 314.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002714/0.04547, allocations: 2.581 MB / 340.6 MB, free: 12.19 MB / 314.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001017/0.04649, allocations: 1.213 MB / 341.9 MB, free: 10.92 MB / 314.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001273/0.04776, allocations: 1.708 MB / 343.6 MB, free: 9.207 MB / 314.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001247/0.04901, allocations: 1.122 MB / 344.7 MB, free: 8.082 MB / 314.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002556/0.04926, allocations: 216 kB / 344.9 MB, free: 7.871 MB / 314.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.006497/0.05576, allocations: 2.589 MB / 347.5 MB, free: 5.277 MB / 314.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003224/0.05608, allocations: 0.5295 MB / 348 MB, free: 4.746 MB / 314.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006234/0.0567, allocations: 0.799 MB / 348.8 MB, free: 3.945 MB / 314.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.007098/0.0638, allocations: 4.708 MB / 353.5 MB, free: 15.21 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.837e-06/0.06381, allocations: 0 / 353.5 MB, free: 15.21 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.343e-06/0.06381, allocations: 0 / 353.5 MB, free: 15.21 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 1.289e-05/0.06382, allocations: 0 / 353.5 MB, free: 15.21 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 455
 * Number of variables: 455
Notification: Performance of Generate backend data structure: time 0.002449/0.06627, allocations: 2.629 MB / 356.2 MB, free: 12.55 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.335e-05/0.0663, allocations: 12.03 kB / 356.2 MB, free: 12.54 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001068/0.06737, allocations: 0.6427 MB / 356.8 MB, free: 11.89 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0008167/0.06819, allocations: 0.7076 MB / 357.5 MB, free: 11.15 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001311/0.06832, allocations: 243 kB / 357.8 MB, free: 10.89 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001745/0.06849, allocations: 184.3 kB / 357.9 MB, free: 10.71 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001396/0.06989, allocations: 1.548 MB / 359.5 MB, free: 9.125 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.64e-05/0.06992, allocations: 192 / 359.5 MB, free: 9.125 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001428/0.07006, allocations: 76.12 kB / 359.6 MB, free: 9.051 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.635e-05/0.07008, allocations: 44 kB / 359.6 MB, free: 9.008 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001325/0.07141, allocations: 1.297 MB / 360.9 MB, free: 7.707 MB / 330.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.004643/0.07605, allocations: 4.193 MB / 365.1 MB, free: 3.414 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.002277/0.07833, allocations: 1.992 MB / 367.1 MB, free: 1.395 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.000387/0.07872, allocations: 399.5 kB / 367.5 MB, free: 1 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.004418/0.08313, allocations: 3.824 MB / 371.3 MB, free: 13.15 MB / 346.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.758e-05/0.08316, allocations: 47.56 kB / 371.3 MB, free: 13.1 MB / 346.7 MB
Notification: Performance of pre-optimization done (n=122): time 1.964e-06/0.08316, allocations: 4 kB / 371.3 MB, free: 13.09 MB / 346.7 MB
Notification: Performance of matching and sorting (n=150): time 0.01059/0.09375, allocations: 4.594 MB / 375.9 MB, free: 8.43 MB / 346.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.211e-05/0.09379, allocations: 94.42 kB / 376 MB, free: 8.32 MB / 346.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.000489/0.09428, allocations: 0.7836 MB / 376.8 MB, free: 7.516 MB / 346.7 MB
Notification: Performance of collectPreVariables (initialization): time 5.634e-05/0.09434, allocations: 49.7 kB / 376.9 MB, free: 7.461 MB / 346.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0003008/0.09464, allocations: 0.7747 MB / 377.6 MB, free: 6.676 MB / 346.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002556/0.0949, allocations: 0.5422 MB / 378.2 MB, free: 6.129 MB / 346.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002874/0.09518, allocations: 375.3 kB / 378.5 MB, free: 5.754 MB / 346.7 MB
Notification: Performance of setup shared object (initialization): time 9.361e-05/0.09528, allocations: 365.7 kB / 378.9 MB, free: 5.391 MB / 346.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002774/0.09555, allocations: 238.8 kB / 379.1 MB, free: 5.152 MB / 346.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0005882/0.09614, allocations: 0.958 MB / 380.1 MB, free: 3.855 MB / 346.7 MB
Warning: It was not possible to determine if the initialization problem is consistent, because of not evaluable parameters/start values during compile time: solution_at_constant_temperature.temperature = solution_at_constant_temperature.temperature_start (fixedTemperature.T = solution_at_constant_temperature.temperature_start)
Notification: Performance of analyzeInitialSystem (initialization): time 0.001363/0.09751, allocations: 1.459 MB / 381.6 MB, free: 2.062 MB / 346.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.178e-06/0.09751, allocations: 8 kB / 381.6 MB, free: 2.055 MB / 346.7 MB
Notification: Performance of matching and sorting (n=258) (initialization): time 0.002853/0.1004, allocations: 1.669 MB / 383.2 MB, free: 372 kB / 346.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.418e-05/0.1004, allocations: 19.94 kB / 383.3 MB, free: 352 kB / 346.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.113e-05/0.1004, allocations: 28.12 kB / 383.3 MB, free: 324 kB / 346.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.003902/0.1043, allocations: 1.062 MB / 384.3 MB, free: 15.24 MB / 362.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.001454/0.1058, allocations: 0.5773 MB / 384.9 MB, free: 14.66 MB / 362.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.006863/0.1126, allocations: 6.327 MB / 391.2 MB, free: 7.996 MB / 362.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0009243/0.1136, allocations: 75.95 kB / 391.3 MB, free: 7.922 MB / 362.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001445/0.1137, allocations: 99.97 kB / 391.4 MB, free: 7.824 MB / 362.7 MB
Warning: The initial conditions are over specified. The following 1 initial equations are redundant, so they are removed from the initialization system:
         solution_at_constant_temperature.temperature = solution_at_constant_temperature.temperature_start.
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 107
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (241):
 * Single equations (assignments): 237
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 4
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(3,6,77.8%), (1,3,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 2 systems
   {(1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.000403/0.1141, allocations: 243.9 kB / 391.7 MB, free: 7.574 MB / 362.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002304/0.1143, allocations: 123.9 kB / 391.8 MB, free: 7.453 MB / 362.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00437/0.1187, allocations: 1.823 MB / 393.6 MB, free: 5.578 MB / 362.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.239e-05/0.1187, allocations: 16 kB / 393.6 MB, free: 5.562 MB / 362.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 6.152e-06/0.1187, allocations: 0 / 393.6 MB, free: 5.562 MB / 362.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.318e-05/0.1187, allocations: 7.969 kB / 393.6 MB, free: 5.555 MB / 362.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.003023/0.1218, allocations: 1.601 MB / 395.2 MB, free: 3.883 MB / 362.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.103e-06/0.1218, allocations: 4 kB / 395.2 MB, free: 3.879 MB / 362.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.001003/0.1228, allocations: 347.9 kB / 395.6 MB, free: 3.539 MB / 362.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.005357/0.1281, allocations: 1.175 MB / 396.7 MB, free: 2.348 MB / 362.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 9.554e-05/0.1282, allocations: 39.98 kB / 396.8 MB, free: 2.309 MB / 362.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.006776/0.135, allocations: 7.352 MB / 404.1 MB, free: 10.53 MB / 378.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.184e-06/0.135, allocations: 0 / 404.1 MB, free: 10.53 MB / 378.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.004197/0.1392, allocations: 1.825 MB / 406 MB, free: 8.641 MB / 378.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0002473/0.1394, allocations: 119 kB / 406.1 MB, free: 8.523 MB / 378.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001419/0.1396, allocations: 35.94 kB / 406.1 MB, free: 8.488 MB / 378.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0004708/0.1401, allocations: 31.98 kB / 406.1 MB, free: 8.457 MB / 378.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002701/0.1403, allocations: 129.1 kB / 406.3 MB, free: 8.332 MB / 378.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 8.067e-05/0.1404, allocations: 39.98 kB / 406.3 MB, free: 8.293 MB / 378.7 MB
Notification: Performance of sorting global known variables: time 0.0003906/0.1408, allocations: 375.9 kB / 406.7 MB, free: 7.914 MB / 378.7 MB
Notification: Performance of sort global known variables: time 7e-08/0.1408, allocations: 0 / 406.7 MB, free: 7.914 MB / 378.7 MB
Notification: Performance of remove unused functions: time 0.002993/0.1438, allocations: 1.06 MB / 407.7 MB, free: 6.852 MB / 378.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 12
 * Number of states: 7 (A1.logn,B1.logn,H2O.logn,A.logn,B.logn,H2O1.amountOfBonds,H2O1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (137):
 * Single equations (assignments): 132
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 5
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,3,100.0%), (2,7,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,1), (2,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.001891/0.1457, allocations: 1.219 MB / 409 MB, free: 5.617 MB / 378.7 MB
Notification: Performance of simCode: created initialization part: time 0.002285/0.148, allocations: 1.532 MB / 410.5 MB, free: 4.031 MB / 378.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.22e-05/0.148, allocations: 21.81 kB / 410.5 MB, free: 4.008 MB / 378.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001108/0.1491, allocations: 1.098 MB / 411.6 MB, free: 2.84 MB / 378.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001087/0.1502, allocations: 343.3 kB / 411.9 MB, free: 2.52 MB / 378.7 MB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004217/0.1544, allocations: 2.754 MB / 414.7 MB, free: 15.68 MB / 394.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0002626/0.1547, allocations: 292.5 kB / 415 MB, free: 15.38 MB / 394.7 MB
Notification: Performance of simCode: alias equations: time 0.0008779/0.1555, allocations: 309.6 kB / 415.3 MB, free: 15.08 MB / 394.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.000782/0.1563, allocations: 441 kB / 415.7 MB, free: 14.65 MB / 394.7 MB
Notification: Performance of SimCode: time 1.212e-06/0.1563, allocations: 4 kB / 415.7 MB, free: 14.64 MB / 394.7 MB
Notification: Performance of Templates: time 0.1751/0.3315, allocations: 42.92 MB / 458.6 MB, free: 126.4 MB / 410.7 MB
"
[Timeout remaining time 660]
make -j1 -f Chemical_Chemical.Obsolete.Examples.ExothermicReaction.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.ExothermicReaction.sim & ./Chemical_Chemical.Obsolete.Examples.ExothermicReaction -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.ExothermicReaction.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.248103079851717]