Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001313/0.001313, allocations: 80.75 kB / 19.94 MB, free: 4.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001571/0.001571, allocations: 181 kB / 23.36 MB, free: 1.133 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.038/1.038, allocations: 177.1 MB / 203.8 MB, free: 5.469 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.0658/0.0658, allocations: 12.76 MB / 273 MB, free: 156 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.653e-06/1.653e-06, allocations: 0 / 294.1 MB, free: 11.78 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.618e-05/1.783e-05, allocations: 2.312 kB / 294.1 MB, free: 11.78 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC): time 0.007897/0.007915, allocations: 10.48 MB / 304.6 MB, free: 4.668 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01282/0.02073, allocations: 11.26 MB / 315.8 MB, free: 11.16 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001863/0.0226, allocations: 95 kB / 315.9 MB, free: 11.07 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0006725/0.02327, allocations: 412 kB / 316.3 MB, free: 10.66 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.004954/0.02822, allocations: 2.145 MB / 318.5 MB, free: 8.504 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.003741/0.03196, allocations: 1.964 MB / 320.4 MB, free: 6.547 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002723/0.03469, allocations: 2.865 MB / 323.3 MB, free: 3.668 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0005629/0.03525, allocations: 420.6 kB / 323.7 MB, free: 3.219 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001157/0.03641, allocations: 1.371 MB / 325.1 MB, free: 1.844 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001144/0.03755, allocations: 1.211 MB / 326.3 MB, free: 0.6289 MB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002215/0.03777, allocations: 148 kB / 326.4 MB, free: 496 kB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002621/0.03804, allocations: 159.9 kB / 326.6 MB, free: 336 kB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.000348/0.03838, allocations: 0.5409 MB / 327.1 MB, free: 15.79 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.000544/0.03893, allocations: 0.7051 MB / 327.8 MB, free: 15.08 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.00134/0.04027, allocations: 1.876 MB / 329.7 MB, free: 13.2 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.847e-06/0.04027, allocations: 0 / 329.7 MB, free: 13.2 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.272e-06/0.04027, allocations: 0 / 329.7 MB, free: 13.2 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 1.576e-05/0.04029, allocations: 0 / 329.7 MB, free: 13.2 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.002512/0.0428, allocations: 2.443 MB / 332.1 MB, free: 10.71 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.418e-05/0.04283, allocations: 11.98 kB / 332.2 MB, free: 10.7 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0006388/0.04347, allocations: 324.7 kB / 332.5 MB, free: 10.39 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001238/0.04471, allocations: 1.172 MB / 333.6 MB, free: 9.172 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.463e-05/0.04477, allocations: 94.58 kB / 333.7 MB, free: 9.078 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001096/0.04488, allocations: 120.4 kB / 333.9 MB, free: 8.961 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001128/0.046, allocations: 0.8106 MB / 334.7 MB, free: 8.105 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.143e-05/0.04602, allocations: 7.938 kB / 334.7 MB, free: 8.098 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.063e-05/0.04609, allocations: 44 kB / 334.7 MB, free: 8.055 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.268e-05/0.04611, allocations: 28 kB / 334.7 MB, free: 8.027 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004899/0.0466, allocations: 362.6 kB / 335.1 MB, free: 7.66 MB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003432/0.05003, allocations: 2.517 MB / 337.6 MB, free: 5.086 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0004574/0.05049, allocations: 434.7 kB / 338 MB, free: 4.641 MB / 298.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002249/0.05071, allocations: 195.6 kB / 338.2 MB, free: 4.445 MB / 298.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 5.249e-05/0.05076, allocations: 17 kB / 338.2 MB, free: 4.43 MB / 298.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.939e-05/0.05079, allocations: 43.5 kB / 338.3 MB, free: 4.379 MB / 298.7 MB
Notification: Performance of pre-optimization done (n=98): time 2.134e-06/0.0508, allocations: 0 / 338.3 MB, free: 4.379 MB / 298.7 MB
Notification: Performance of matching and sorting (n=98): time 0.01331/0.06411, allocations: 4.29 MB / 342.6 MB, free: 68 kB / 298.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.426e-05/0.06416, allocations: 90.11 kB / 342.7 MB, free: 15.96 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001012/0.06517, allocations: 1.381 MB / 344 MB, free: 14.54 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 4.634e-05/0.06522, allocations: 45.7 kB / 344.1 MB, free: 14.49 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0002951/0.06552, allocations: 0.6202 MB / 344.7 MB, free: 13.86 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0002025/0.06572, allocations: 356.8 kB / 345.1 MB, free: 13.51 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002393/0.06596, allocations: 255.3 kB / 345.3 MB, free: 13.25 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 9.845e-05/0.06606, allocations: 361.8 kB / 345.7 MB, free: 12.89 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002146/0.06627, allocations: 146.7 kB / 345.8 MB, free: 12.75 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0003725/0.06664, allocations: 0.5072 MB / 346.3 MB, free: 12.08 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0006783/0.06732, allocations: 0.7707 MB / 347.1 MB, free: 11.14 MB / 314.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.593e-06/0.06733, allocations: 4 kB / 347.1 MB, free: 11.14 MB / 314.7 MB
Notification: Performance of matching and sorting (n=173) (initialization): time 0.003036/0.07036, allocations: 1.396 MB / 348.5 MB, free: 9.73 MB / 314.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.021e-05/0.07038, allocations: 8 kB / 348.5 MB, free: 9.723 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.433e-05/0.0704, allocations: 12 kB / 348.5 MB, free: 9.711 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.0036/0.074, allocations: 1.143 MB / 349.6 MB, free: 8.562 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0004694/0.07447, allocations: 232.5 kB / 349.9 MB, free: 8.336 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.006207/0.08067, allocations: 4.309 MB / 354.2 MB, free: 3.965 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0006415/0.08132, allocations: 158.9 kB / 354.3 MB, free: 3.809 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 5.747e-05/0.08137, allocations: 48 kB / 354.4 MB, free: 3.762 MB / 314.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (115):
 * Single equations (assignments): 114
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.000254/0.08163, allocations: 188.3 kB / 354.6 MB, free: 3.566 MB / 314.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001605/0.08179, allocations: 135.8 kB / 354.7 MB, free: 3.434 MB / 314.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.000184/0.08197, allocations: 227.7 kB / 354.9 MB, free: 3.203 MB / 314.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.372e-06/0.08198, allocations: 8 kB / 354.9 MB, free: 3.195 MB / 314.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 3.447e-06/0.08198, allocations: 0 / 354.9 MB, free: 3.195 MB / 314.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.975e-06/0.08199, allocations: 7.984 kB / 354.9 MB, free: 3.188 MB / 314.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001075/0.08307, allocations: 0.6906 MB / 355.6 MB, free: 2.477 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.238e-06/0.08307, allocations: 4 kB / 355.6 MB, free: 2.473 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0002283/0.0833, allocations: 95.88 kB / 355.7 MB, free: 2.379 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.00354/0.08684, allocations: 1.111 MB / 356.8 MB, free: 1.262 MB / 314.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 4.582e-05/0.08688, allocations: 19.94 kB / 356.9 MB, free: 1.242 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.005957/0.09284, allocations: 4.176 MB / 361 MB, free: 12.97 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 9.42e-07/0.09284, allocations: 0 / 361 MB, free: 12.97 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003092/0.09593, allocations: 1.463 MB / 362.5 MB, free: 11.48 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0003897/0.09632, allocations: 237 kB / 362.7 MB, free: 11.25 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001162/0.09644, allocations: 20 kB / 362.7 MB, free: 11.23 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003782/0.09682, allocations: 31.95 kB / 362.8 MB, free: 11.2 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.000159/0.09698, allocations: 89.25 kB / 362.9 MB, free: 11.11 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.324e-05/0.09701, allocations: 16 kB / 362.9 MB, free: 11.09 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0005187/0.09753, allocations: 0.7004 MB / 363.6 MB, free: 10.36 MB / 330.7 MB
Notification: Performance of sort global known variables: time 9e-08/0.09753, allocations: 4.031 kB / 363.6 MB, free: 10.36 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001085/0.09861, allocations: 0.6518 MB / 364.2 MB, free: 9.707 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (40):
 * Single equations (assignments): 39
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001323/0.09875, allocations: 88.36 kB / 364.3 MB, free: 9.613 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.001797/0.1005, allocations: 1.193 MB / 365.5 MB, free: 8.41 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 1.871e-05/0.1006, allocations: 20.5 kB / 365.5 MB, free: 8.391 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001223/0.1018, allocations: 0.8537 MB / 366.4 MB, free: 7.516 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008375/0.1026, allocations: 327.2 kB / 366.7 MB, free: 7.199 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003675/0.1063, allocations: 2.838 MB / 369.5 MB, free: 4.32 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0006464/0.1069, allocations: 391.3 kB / 369.9 MB, free: 3.914 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0003132/0.1073, allocations: 146.9 kB / 370.1 MB, free: 3.766 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004437/0.1077, allocations: 305.1 kB / 370.4 MB, free: 3.465 MB / 330.7 MB
Notification: Performance of SimCode: time 9.12e-07/0.1077, allocations: 0 / 370.4 MB, free: 3.465 MB / 330.7 MB
Notification: Performance of Templates: time 0.04255/0.1502, allocations: 39.93 MB / 410.3 MB, free: 11.9 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS > Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.169190464075655]