Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.centralMetabolism.extra_cellular.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009215/0.0009215, allocations: 80.88 kB / 19.94 MB, free: 4.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009626/0.0009626, allocations: 181 kB / 23.36 MB, free: 1.133 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.03/1.03, allocations: 177.1 MB / 203.8 MB, free: 5.48 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo): time 0.04174/0.04174, allocations: 9.566 MB / 269.8 MB, free: 3.82 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package BioChem with version 1.1.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.centralMetabolism.extra_cellular,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.centralMetabolism.extra_cellular")
translateModel(BioChem.Examples.centralMetabolism.extra_cellular,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.centralMetabolism.extra_cellular") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.353e-06/1.353e-06, allocations: 0 / 289.3 MB, free: 364 kB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.338e-05/1.473e-05, allocations: 2.312 kB / 289.3 MB, free: 360 kB / 266.7 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.centralMetabolism.extra_cellular): time 0.1286/0.1286, allocations: 5.22 MB / 294.5 MB, free: 17.1 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.002407/0.131, allocations: 1.321 MB / 295.8 MB, free: 16.12 MB / 266.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0003864/0.1314, allocations: 53.62 kB / 295.9 MB, free: 16.12 MB / 266.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0003482/0.1318, allocations: 198.1 kB / 296.1 MB, free: 15.96 MB / 266.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.0005017/0.1323, allocations: 308.2 kB / 296.4 MB, free: 15.73 MB / 266.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0005363/0.1328, allocations: 354.4 kB / 296.7 MB, free: 15.51 MB / 266.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001032/0.1338, allocations: 1.414 MB / 298.1 MB, free: 14.75 MB / 266.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0005089/0.1343, allocations: 444.4 kB / 298.6 MB, free: 14.48 MB / 266.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.0008065/0.1351, allocations: 0.8804 MB / 299.4 MB, free: 14.03 MB / 266.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.0006319/0.1358, allocations: 0.5005 MB / 299.9 MB, free: 13.84 MB / 266.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002637/0.136, allocations: 188.8 kB / 300.1 MB, free: 13.84 MB / 266.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.000215/0.1362, allocations: 189.9 kB / 300.3 MB, free: 13.84 MB / 266.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0001944/0.1364, allocations: 359.6 kB / 300.7 MB, free: 13.58 MB / 266.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0004173/0.1369, allocations: 496.5 kB / 301.1 MB, free: 13.32 MB / 266.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.0008148/0.1377, allocations: 1.056 MB / 302.2 MB, free: 12.69 MB / 266.7 MB
Notification: Performance of FrontEnd - DAE generated: time 4.248e-06/0.1377, allocations: 0 / 302.2 MB, free: 12.69 MB / 266.7 MB
Notification: Performance of FrontEnd: time 1.643e-06/0.1377, allocations: 2.562 kB / 302.2 MB, free: 12.69 MB / 266.7 MB
Notification: Performance of Transformations before backend: time 2.832e-05/0.1377, allocations: 0 / 302.2 MB, free: 12.69 MB / 266.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 353
 * Number of variables: 353
Notification: Performance of Generate backend data structure: time 0.001521/0.1392, allocations: 1.464 MB / 303.7 MB, free: 11.68 MB / 266.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.191e-05/0.1393, allocations: 8.844 kB / 303.7 MB, free: 11.68 MB / 266.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001902/0.1395, allocations: 204.6 kB / 303.9 MB, free: 11.59 MB / 266.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003577/0.1398, allocations: 318.8 kB / 304.2 MB, free: 11.34 MB / 266.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 5.324e-05/0.1399, allocations: 102.7 kB / 304.3 MB, free: 11.29 MB / 266.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001169/0.14, allocations: 144.9 kB / 304.4 MB, free: 11.24 MB / 266.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0008201/0.1408, allocations: 0.914 MB / 305.3 MB, free: 10.7 MB / 266.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.392e-05/0.1408, allocations: 6.547 kB / 305.3 MB, free: 10.7 MB / 266.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.143e-05/0.1409, allocations: 56.5 kB / 305.4 MB, free: 10.66 MB / 266.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.816e-05/0.1409, allocations: 37.16 kB / 305.4 MB, free: 10.66 MB / 266.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0005582/0.1415, allocations: 379.8 kB / 305.8 MB, free: 10.57 MB / 266.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003404/0.1449, allocations: 2.969 MB / 308.8 MB, free: 8.266 MB / 266.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0005973/0.1455, allocations: 0.6453 MB / 309.4 MB, free: 7.617 MB / 266.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002014/0.1457, allocations: 213.1 kB / 309.6 MB, free: 7.406 MB / 266.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 3.875e-05/0.1457, allocations: 16.94 kB / 309.6 MB, free: 7.391 MB / 266.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.234e-05/0.1457, allocations: 47.56 kB / 309.7 MB, free: 7.336 MB / 266.7 MB
Notification: Performance of pre-optimization done (n=96): time 2.595e-06/0.1457, allocations: 0 / 309.7 MB, free: 7.336 MB / 266.7 MB
Notification: Performance of matching and sorting (n=114): time 0.003797/0.1495, allocations: 2.827 MB / 312.5 MB, free: 4.551 MB / 266.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 2.349e-05/0.1496, allocations: 64.34 kB / 312.6 MB, free: 4.477 MB / 266.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.000162/0.1497, allocations: 372.3 kB / 312.9 MB, free: 4.102 MB / 266.7 MB
Notification: Performance of collectPreVariables (initialization): time 3.838e-05/0.1498, allocations: 45.7 kB / 313 MB, free: 4.051 MB / 266.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001223/0.1499, allocations: 0.4932 MB / 313.5 MB, free: 3.551 MB / 266.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0001514/0.15, allocations: 443 kB / 313.9 MB, free: 3.117 MB / 266.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001777/0.1502, allocations: 198.8 kB / 314.1 MB, free: 2.914 MB / 266.7 MB
Notification: Performance of setup shared object (initialization): time 6.006e-05/0.1503, allocations: 386.6 kB / 314.5 MB, free: 2.527 MB / 266.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001614/0.1504, allocations: 146.6 kB / 314.6 MB, free: 2.387 MB / 266.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002478/0.1507, allocations: 435.9 kB / 315.1 MB, free: 1.852 MB / 266.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0007799/0.1515, allocations: 0.9364 MB / 316 MB, free: 0.8242 MB / 266.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.296e-06/0.1515, allocations: 0 / 316 MB, free: 0.8242 MB / 266.7 MB
Notification: Performance of matching and sorting (n=165) (initialization): time 0.0007473/0.1522, allocations: 0.7634 MB / 316.8 MB, free: 48 kB / 266.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.956e-05/0.1522, allocations: 9 kB / 316.8 MB, free: 40 kB / 266.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.129e-05/0.1523, allocations: 8 kB / 316.8 MB, free: 32 kB / 266.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.0003155/0.1526, allocations: 133.9 kB / 316.9 MB, free: 15.9 MB / 282.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0007619/0.1533, allocations: 335.5 kB / 317.2 MB, free: 15.57 MB / 282.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.001647/0.155, allocations: 2.843 MB / 320.1 MB, free: 12.56 MB / 282.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0002973/0.1553, allocations: 39.98 kB / 320.1 MB, free: 12.52 MB / 282.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.479e-05/0.1553, allocations: 36 kB / 320.1 MB, free: 12.49 MB / 282.7 MB
Warning: Assuming fixed start value for the following 15 variables:
         V:VARIABLE(start = 2.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         cytosol.V:VARIABLE(start = 2.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         cytosol.GLY.c:VARIABLE(min = 0.0 start = 1.0 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         cytosol.mitochondria.V:VARIABLE(start = 2.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         LACext.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.mitochondria.NADm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.mitochondria.NADHm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.CP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.LAC.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.AMP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.IMP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.ADP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.PYR.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.FDP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.NADH.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 35
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (157):
 * Single equations (assignments): 155
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,4,100.0%), (1,4,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of prepare postOptimizeDAE: time 0.0003377/0.1557, allocations: 235.2 kB / 320.4 MB, free: 12.26 MB / 282.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001093/0.1558, allocations: 83.88 kB / 320.5 MB, free: 12.18 MB / 282.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001121/0.1559, allocations: 127 kB / 320.6 MB, free: 12.05 MB / 282.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.662e-06/0.1559, allocations: 16 kB / 320.6 MB, free: 12.04 MB / 282.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.061e-05/0.1559, allocations: 4 kB / 320.6 MB, free: 12.03 MB / 282.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.015e-05/0.1559, allocations: 11.91 kB / 320.6 MB, free: 12.02 MB / 282.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001689/0.1576, allocations: 1.28 MB / 321.9 MB, free: 10.71 MB / 282.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.236e-06/0.1576, allocations: 0 / 321.9 MB, free: 10.71 MB / 282.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000665/0.1583, allocations: 247.7 kB / 322.1 MB, free: 10.47 MB / 282.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0002556/0.1585, allocations: 121.6 kB / 322.3 MB, free: 10.34 MB / 282.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.316e-05/0.1586, allocations: 27.98 kB / 322.3 MB, free: 10.32 MB / 282.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.001494/0.1601, allocations: 2.843 MB / 325.1 MB, free: 7.301 MB / 282.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.085e-06/0.1601, allocations: 4.547 kB / 325.1 MB, free: 7.297 MB / 282.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001008/0.1611, allocations: 0.9686 MB / 326.1 MB, free: 6.309 MB / 282.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 4.142e-05/0.1611, allocations: 51.58 kB / 326.1 MB, free: 6.258 MB / 282.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 6.285e-05/0.1612, allocations: 24 kB / 326.2 MB, free: 6.234 MB / 282.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002287/0.1614, allocations: 31.92 kB / 326.2 MB, free: 6.203 MB / 282.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 9.242e-05/0.1615, allocations: 68.86 kB / 326.3 MB, free: 6.137 MB / 282.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.422e-05/0.1615, allocations: 23.92 kB / 326.3 MB, free: 6.113 MB / 282.7 MB
Notification: Performance of sorting global known variables: time 9.187e-05/0.1616, allocations: 140.7 kB / 326.4 MB, free: 5.973 MB / 282.7 MB
Notification: Performance of sort global known variables: time 4e-08/0.1616, allocations: 0 / 326.4 MB, free: 5.973 MB / 282.7 MB
Notification: Performance of remove unused functions: time 0.0005515/0.1622, allocations: 276 kB / 326.7 MB, free: 5.703 MB / 282.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 17 (V,cytosol.V,cytosol.NADH.n,cytosol.FDP.n,cytosol.PYR.n,cytosol.ADP.n,cytosol.IMP.n,cytosol.AMP.n,cytosol.LAC.n,cytosol.CP.n,cytosol.GLY.c,cytosol.G6P.c,cytosol.mitochondria.V,cytosol.mitochondria.NADHm.n,cytosol.mitochondria.NADm.n,cytosol.DHAP.c,LACext.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (106):
 * Single equations (assignments): 104
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,4,100.0%), (1,4,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001224/0.1623, allocations: 105.1 kB / 326.8 MB, free: 5.59 MB / 282.7 MB
Notification: Performance of simCode: created initialization part: time 0.0008204/0.1631, allocations: 0.8686 MB / 327.7 MB, free: 4.695 MB / 282.7 MB
Notification: Performance of simCode: created event and clocks part: time 1.243e-05/0.1631, allocations: 8.5 kB / 327.7 MB, free: 4.688 MB / 282.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0005029/0.1636, allocations: 0.5912 MB / 328.3 MB, free: 4.07 MB / 282.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003631/0.164, allocations: 121.9 kB / 328.4 MB, free: 3.957 MB / 282.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002345/0.1663, allocations: 2.051 MB / 330.4 MB, free: 1.871 MB / 282.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001367/0.1665, allocations: 212.5 kB / 330.7 MB, free: 1.645 MB / 282.7 MB
Notification: Performance of simCode: alias equations: time 0.0002922/0.1668, allocations: 92.66 kB / 330.7 MB, free: 1.555 MB / 282.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003639/0.1671, allocations: 205.2 kB / 330.9 MB, free: 1.355 MB / 282.7 MB
Notification: Performance of SimCode: time 7.82e-07/0.1671, allocations: 4 kB / 330.9 MB, free: 1.352 MB / 282.7 MB
Notification: Performance of Templates: time 0.01391/0.181, allocations: 11.64 MB / 342.6 MB, free: 5.902 MB / 298.7 MB
"
[Timeout remaining time 660]
make -j1 -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular.makefile [Timeout 660]
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe >> ../files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular.sim & ./BioChem_BioChem.Examples.centralMetabolism.extra_cellular -abortSlowSimulation -alarm=240 -s gbode -gbm=radauIIA3 -lv LOG_STATS > BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 3.1249081967398524]