Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.00151/0.00151, allocations: 80.94 kB / 19.94 MB, free: 4.543 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.002078/0.002078, allocations: 177 kB / 23.36 MB, free: 1.133 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9837/0.9837, allocations: 177.1 MB / 203.8 MB, free: 5.48 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.616/1.616, allocations: 273.5 MB / 0.5212 GB, free: 14.65 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine") translateModel(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine,tolerance=1e-06,outputFormat="empty",numberOfIntervals=500,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.603e-06/1.603e-06, allocations: 0 / 0.5954 GB, free: 2.719 MB / 0.5105 GB Notification: Performance of FrontEnd - Absyn->SCode: time 2.299e-05/2.46e-05, allocations: 2.312 kB / 0.5954 GB, free: 2.715 MB / 0.5105 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine): time 0.005674/0.005698, allocations: 6.798 MB / 0.6021 GB, free: 11.98 MB / 0.5261 GB Notification: Performance of NFInst.instExpressions: time 0.002357/0.008055, allocations: 1.35 MB / 0.6034 GB, free: 10.63 MB / 0.5261 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0002999/0.008355, allocations: 8 kB / 0.6034 GB, free: 10.62 MB / 0.5261 GB Notification: Performance of NFTyping.typeComponents: time 0.0002342/0.00859, allocations: 112.1 kB / 0.6035 GB, free: 10.52 MB / 0.5261 GB Notification: Performance of NFTyping.typeBindings: time 0.0007922/0.009382, allocations: 342.1 kB / 0.6038 GB, free: 10.19 MB / 0.5261 GB Notification: Performance of NFTyping.typeClassSections: time 0.0007723/0.01015, allocations: 287.6 kB / 0.6041 GB, free: 9.906 MB / 0.5261 GB Notification: Performance of NFFlatten.flatten: time 0.001067/0.01122, allocations: 1.221 MB / 0.6053 GB, free: 8.68 MB / 0.5261 GB Notification: Performance of NFFlatten.resolveConnections: time 0.00027/0.01149, allocations: 189.8 kB / 0.6055 GB, free: 8.477 MB / 0.5261 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0006161/0.01211, allocations: 0.6315 MB / 0.6061 GB, free: 7.844 MB / 0.5261 GB Notification: Performance of NFSimplifyModel.simplify: time 0.000843/0.01295, allocations: 366.9 kB / 0.6064 GB, free: 7.484 MB / 0.5261 GB Notification: Performance of NFPackage.collectConstants: time 9.043e-05/0.01304, allocations: 108 kB / 0.6065 GB, free: 7.379 MB / 0.5261 GB Notification: Performance of NFFlatten.collectFunctions: time 9.247e-05/0.01313, allocations: 112 kB / 0.6066 GB, free: 7.27 MB / 0.5261 GB Notification: Performance of NFScalarize.scalarize: time 0.0001004/0.01323, allocations: 195.3 kB / 0.6068 GB, free: 7.078 MB / 0.5261 GB Notification: Performance of NFVerifyModel.verify: time 0.00025/0.01348, allocations: 363.2 kB / 0.6072 GB, free: 6.723 MB / 0.5261 GB Notification: Performance of NFConvertDAE.convert: time 0.000545/0.01403, allocations: 0.7165 MB / 0.6079 GB, free: 6.004 MB / 0.5261 GB Notification: Performance of FrontEnd - DAE generated: time 4.679e-06/0.01403, allocations: 0 / 0.6079 GB, free: 6.004 MB / 0.5261 GB Notification: Performance of FrontEnd: time 1.062e-06/0.01403, allocations: 4 kB / 0.6079 GB, free: 6 MB / 0.5261 GB Notification: Performance of Transformations before backend: time 7.133e-06/0.01404, allocations: 0 / 0.6079 GB, free: 6 MB / 0.5261 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 146 * Number of variables: 146 Notification: Performance of Generate backend data structure: time 0.00122/0.01526, allocations: 1.296 MB / 0.6091 GB, free: 4.617 MB / 0.5261 GB Notification: Performance of prepare preOptimizeDAE: time 4.233e-05/0.0153, allocations: 8.031 kB / 0.6091 GB, free: 4.609 MB / 0.5261 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001297/0.01543, allocations: 107.9 kB / 0.6092 GB, free: 4.504 MB / 0.5261 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003775/0.01581, allocations: 328.9 kB / 0.6096 GB, free: 4.152 MB / 0.5261 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.333e-05/0.01584, allocations: 41.31 kB / 0.6096 GB, free: 4.113 MB / 0.5261 GB Notification: Performance of preOpt expandDerOperator (simulation): time 7.85e-05/0.01592, allocations: 71.95 kB / 0.6097 GB, free: 4.043 MB / 0.5261 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0005875/0.01651, allocations: 0.6739 MB / 0.6103 GB, free: 3.293 MB / 0.5261 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.786e-05/0.01654, allocations: 11.95 kB / 0.6103 GB, free: 3.281 MB / 0.5261 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.768e-05/0.01658, allocations: 24 kB / 0.6104 GB, free: 3.258 MB / 0.5261 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.559e-05/0.01659, allocations: 23.2 kB / 0.6104 GB, free: 3.238 MB / 0.5261 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.000389/0.01698, allocations: 430.3 kB / 0.6108 GB, free: 2.793 MB / 0.5261 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001332/0.01831, allocations: 1.454 MB / 0.6122 GB, free: 1.297 MB / 0.5261 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0005454/0.01886, allocations: 0.5293 MB / 0.6127 GB, free: 0.6875 MB / 0.5261 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0004351/0.01929, allocations: 311.1 kB / 0.613 GB, free: 340 kB / 0.5261 GB Notification: Performance of preOpt evalFunc (simulation): time 3.69e-05/0.01933, allocations: 20 kB / 0.613 GB, free: 320 kB / 0.5261 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.4032/0.4225, allocations: 0.9459 MB / 0.614 GB, free: 52.25 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=101): time 2.715e-06/0.4225, allocations: 1.125 kB / 0.614 GB, free: 52.25 MB / 0.5262 GB Notification: Performance of matching and sorting (n=107): time 0.002378/0.4249, allocations: 2.364 MB / 0.6163 GB, free: 50.89 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001158/0.425, allocations: 0.6492 MB / 0.6169 GB, free: 50.14 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003532/0.4254, allocations: 456.5 kB / 0.6173 GB, free: 50.03 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 5.397e-05/0.4254, allocations: 61.25 kB / 0.6174 GB, free: 50 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001135/0.4255, allocations: 235.6 kB / 0.6176 GB, free: 49.91 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001731/0.4257, allocations: 360.2 kB / 0.618 GB, free: 49.73 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001799/0.4259, allocations: 197.4 kB / 0.6182 GB, free: 49.71 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 9.256e-05/0.426, allocations: 413 kB / 0.6186 GB, free: 49.4 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.000242/0.4262, allocations: 410.3 kB / 0.6189 GB, free: 49.11 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0003561/0.4266, allocations: 0.7307 MB / 0.6197 GB, free: 48.4 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0008168/0.4274, allocations: 1.405 MB / 0.621 GB, free: 47.33 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.472e-06/0.4274, allocations: 3.172 kB / 0.621 GB, free: 47.33 MB / 0.5262 GB Notification: Performance of matching and sorting (n=161) (initialization): time 0.000849/0.4283, allocations: 1.075 MB / 0.6221 GB, free: 46.7 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 7.903e-05/0.4283, allocations: 262.5 kB / 0.6223 GB, free: 46.41 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.372e-05/0.4284, allocations: 9.781 kB / 0.6223 GB, free: 46.41 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.513e-05/0.4284, allocations: 15.45 kB / 0.6224 GB, free: 46.41 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0005027/0.4289, allocations: 263.8 kB / 0.6226 GB, free: 46.39 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.403e-05/0.4289, allocations: 22.14 kB / 0.6226 GB, free: 46.39 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003171/0.4292, allocations: 57.81 kB / 0.6227 GB, free: 46.39 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.89e-05/0.4293, allocations: 44.22 kB / 0.6227 GB, free: 46.39 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: green_tee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real green_tee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real green_tee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real black_tea_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real black_tea_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real black_tea_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real coffee_drinker.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real coffee_drinker.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real coffee_drinker.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real coffee_drinker.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real coffee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real coffee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real coffee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real coffee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real black_tea_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real black_tea_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real black_tea_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real black_tea_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real green_tee_drinker.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real green_tee_drinker.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real green_tee_drinker.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real green_tee_drinker.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real green_tee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean green_tee_drinker.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean black_tea_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean black_tea_drinker.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean coffee_drinker.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean coffee_drinker.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 38 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.coffee_drinker.central.Cmin,coffee_drinker.central.Cmin,$PRE.coffee_drinker.central.Cmax,coffee_drinker.central.Cmax,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.black_tea_drinker.central.Cmin,black_tea_drinker.central.Cmin,$PRE.black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmax,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$PRE.black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$PRE.green_tee_drinker.central.Cmin,green_tee_drinker.central.Cmin,$PRE.green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmax,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$PRE.green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$PRE.green_tee_drinker.periodicDose.pulse.count,$PRE.green_tee_drinker.periodicDose.pulse.T_start,$PRE.green_tee_drinker.periodicDose.absorptionLumen.rising,$PRE.green_tee_drinker.central.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$PRE.black_tea_drinker.periodicDose.pulse.count,$PRE.black_tea_drinker.periodicDose.pulse.T_start,$PRE.black_tea_drinker.periodicDose.absorptionLumen.rising,$PRE.black_tea_drinker.central.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.coffee_drinker.periodicDose.pulse.count,$PRE.coffee_drinker.periodicDose.pulse.T_start,$PRE.coffee_drinker.periodicDose.absorptionLumen.rising,$PRE.coffee_drinker.central.rising,coffee_drinker.periodicDose.pulse.count,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (152): * Single equations (assignments): 143 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0004128/0.4297, allocations: 0.5126 MB / 0.6232 GB, free: 46.04 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001169/0.4298, allocations: 96.3 kB / 0.6233 GB, free: 46.04 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 7.45e-05/0.4299, allocations: 88.81 kB / 0.6234 GB, free: 46.03 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.652e-06/0.4299, allocations: 12.33 kB / 0.6234 GB, free: 46.03 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.765e-05/0.4299, allocations: 7.906 kB / 0.6234 GB, free: 46.03 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.02e-05/0.4299, allocations: 7.641 kB / 0.6234 GB, free: 46.03 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001216/0.4311, allocations: 1.456 MB / 0.6249 GB, free: 45.29 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.388e-06/0.4311, allocations: 2.547 kB / 0.6249 GB, free: 45.29 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0003991/0.4315, allocations: 166.8 kB / 0.625 GB, free: 45.29 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 7.253e-06/0.4315, allocations: 6.562 kB / 0.625 GB, free: 45.29 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 3.798e-05/0.4316, allocations: 39.5 kB / 0.6251 GB, free: 45.28 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 4.899e-06/0.4316, allocations: 3.625 kB / 0.6251 GB, free: 45.28 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.264e-06/0.4316, allocations: 6.188 kB / 0.6251 GB, free: 45.28 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0007736/0.4323, allocations: 1.476 MB / 0.6265 GB, free: 44.38 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0001765/0.4325, allocations: 100 kB / 0.6266 GB, free: 44.34 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 8.727e-05/0.4326, allocations: 45.69 kB / 0.6267 GB, free: 44.34 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002409/0.4328, allocations: 40.03 kB / 0.6267 GB, free: 44.34 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001219/0.433, allocations: 98.16 kB / 0.6268 GB, free: 44.34 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.07e-05/0.433, allocations: 31.91 kB / 0.6268 GB, free: 44.34 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0001436/0.4331, allocations: 207.3 kB / 0.627 GB, free: 44.31 MB / 0.5262 GB Notification: Performance of sort global known variables: time 5.1e-08/0.4331, allocations: 0 / 0.627 GB, free: 44.31 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0004968/0.4336, allocations: 246.2 kB / 0.6272 GB, free: 44.31 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 5 * Number of states: 21 (green_tee_drinker.central.C,green_tee_drinker.central.AUC,green_tee_drinker.elim.MExc,green_tee_drinker.periodicDose.TotalCumulativeMass,green_tee_drinker.periodicDose.absorptionLumen.C,green_tee_drinker.periodicDose.absorptionLumen.AUC,green_tee_drinker.periodicDose.variableDose.TotalCumulativeMass,black_tea_drinker.central.C,black_tea_drinker.central.AUC,black_tea_drinker.elim.MExc,black_tea_drinker.periodicDose.TotalCumulativeMass,black_tea_drinker.periodicDose.absorptionLumen.C,black_tea_drinker.periodicDose.absorptionLumen.AUC,black_tea_drinker.periodicDose.variableDose.TotalCumulativeMass,coffee_drinker.central.C,coffee_drinker.central.AUC,coffee_drinker.elim.MExc,coffee_drinker.periodicDose.TotalCumulativeMass,coffee_drinker.periodicDose.absorptionLumen.C,coffee_drinker.periodicDose.absorptionLumen.AUC,coffee_drinker.periodicDose.variableDose.TotalCumulativeMass) * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,green_tee_drinker.central.Cmax,green_tee_drinker.central.Cmin,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmax,green_tee_drinker.periodicDose.absorptionLumen.Cmin,green_tee_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.T_start,green_tee_drinker.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,black_tea_drinker.central.Cmax,black_tea_drinker.central.Cmin,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmax,black_tea_drinker.periodicDose.absorptionLumen.Cmin,black_tea_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.T_start,black_tea_drinker.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,coffee_drinker.central.Cmax,coffee_drinker.central.Cmin,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmax,coffee_drinker.periodicDose.absorptionLumen.Cmin,coffee_drinker.periodicDose.absorptionLumen.rising,coffee_drinker.periodicDose.pulse.T_start,coffee_drinker.periodicDose.pulse.count) * Number of discrete states: 33 (coffee_drinker.periodicDose.pulse.count,coffee_drinker.central.Cmin,$whenCondition15,coffee_drinker.central.Cmax,$whenCondition14,coffee_drinker.central.rising,coffee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition13,coffee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition12,coffee_drinker.periodicDose.absorptionLumen.rising,black_tea_drinker.periodicDose.pulse.count,black_tea_drinker.central.Cmin,$whenCondition10,black_tea_drinker.central.Cmax,$whenCondition9,black_tea_drinker.central.rising,black_tea_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition8,black_tea_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition7,black_tea_drinker.periodicDose.absorptionLumen.rising,green_tee_drinker.periodicDose.pulse.count,green_tee_drinker.central.Cmin,$whenCondition5,green_tee_drinker.central.Cmax,$whenCondition4,green_tee_drinker.central.rising,green_tee_drinker.periodicDose.absorptionLumen.Cmin,$whenCondition3,green_tee_drinker.periodicDose.absorptionLumen.Cmax,$whenCondition2,green_tee_drinker.periodicDose.absorptionLumen.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (89): * Single equations (assignments): 77 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001518/0.4338, allocations: 175.5 kB / 0.6274 GB, free: 44.23 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0007512/0.4345, allocations: 1.428 MB / 0.6288 GB, free: 43.13 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 6.893e-06/0.4346, allocations: 5.875 kB / 0.6288 GB, free: 43.13 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004092/0.435, allocations: 0.7772 MB / 0.6296 GB, free: 42.55 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007965/0.4358, allocations: 282.5 kB / 0.6298 GB, free: 42.51 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002492/0.4383, allocations: 1.883 MB / 0.6317 GB, free: 41.44 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001109/0.4384, allocations: 171.8 kB / 0.6318 GB, free: 41.33 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.0003087/0.4387, allocations: 97.3 kB / 0.6319 GB, free: 41.29 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004541/0.4391, allocations: 336.4 kB / 0.6323 GB, free: 41.2 MB / 0.5262 GB Notification: Performance of SimCode: time 1.172e-06/0.4391, allocations: 1.438 kB / 0.6323 GB, free: 41.2 MB / 0.5262 GB Notification: Performance of Templates: time 0.01702/0.4561, allocations: 15.33 MB / 0.6472 GB, free: 34.46 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 5.0111442967318]