Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008209/0.0008209, allocations: 80.88 kB / 19.94 MB, free: 4.547 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009388/0.0009388, allocations: 181 kB / 23.36 MB, free: 1.133 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.011/1.011, allocations: 177.2 MB / 203.8 MB, free: 5.469 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.575/1.575, allocations: 273.5 MB / 0.5213 GB, free: 14.62 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") translateModel(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites,tolerance=1e-09,outputFormat="empty",numberOfIntervals=864000,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 2.114e-06/2.114e-06, allocations: 1.422 kB / 0.5956 GB, free: 2.508 MB / 0.5105 GB Notification: Performance of FrontEnd - Absyn->SCode: time 1.781e-05/1.993e-05, allocations: 5.828 kB / 0.5956 GB, free: 2.504 MB / 0.5105 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites): time 0.0065/0.00652, allocations: 5.63 MB / 0.6011 GB, free: 12.93 MB / 0.5261 GB Notification: Performance of NFInst.instExpressions: time 0.002644/0.009165, allocations: 1.352 MB / 0.6024 GB, free: 11.59 MB / 0.5261 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.0001923/0.009357, allocations: 11.94 kB / 0.6024 GB, free: 11.58 MB / 0.5261 GB Notification: Performance of NFTyping.typeComponents: time 0.0002071/0.009564, allocations: 128 kB / 0.6026 GB, free: 11.45 MB / 0.5261 GB Notification: Performance of NFTyping.typeBindings: time 0.0004585/0.01002, allocations: 364.8 kB / 0.6029 GB, free: 11.11 MB / 0.5261 GB Notification: Performance of NFTyping.typeClassSections: time 0.0003426/0.01037, allocations: 267.5 kB / 0.6032 GB, free: 10.84 MB / 0.5261 GB Notification: Performance of NFFlatten.flatten: time 0.0007944/0.01116, allocations: 1.275 MB / 0.6044 GB, free: 9.562 MB / 0.5261 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0002641/0.01142, allocations: 225.4 kB / 0.6046 GB, free: 9.32 MB / 0.5261 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0004464/0.01187, allocations: 0.6511 MB / 0.6053 GB, free: 8.668 MB / 0.5261 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0003811/0.01225, allocations: 390.8 kB / 0.6056 GB, free: 8.285 MB / 0.5261 GB Notification: Performance of NFPackage.collectConstants: time 9.541e-05/0.01235, allocations: 108 kB / 0.6057 GB, free: 8.18 MB / 0.5261 GB Notification: Performance of NFFlatten.collectFunctions: time 9.371e-05/0.01244, allocations: 108 kB / 0.6058 GB, free: 8.074 MB / 0.5261 GB Notification: Performance of NFScalarize.scalarize: time 0.0001067/0.01255, allocations: 207.2 kB / 0.606 GB, free: 7.871 MB / 0.5261 GB Notification: Performance of NFVerifyModel.verify: time 0.0002463/0.01279, allocations: 383.2 kB / 0.6064 GB, free: 7.496 MB / 0.5261 GB Notification: Performance of NFConvertDAE.convert: time 0.0004941/0.01329, allocations: 0.7475 MB / 0.6071 GB, free: 6.746 MB / 0.5261 GB Notification: Performance of FrontEnd - DAE generated: time 2.144e-06/0.01329, allocations: 4 kB / 0.6071 GB, free: 6.742 MB / 0.5261 GB Notification: Performance of FrontEnd: time 8.82e-07/0.01329, allocations: 0 / 0.6071 GB, free: 6.742 MB / 0.5261 GB Notification: Performance of Transformations before backend: time 5.911e-06/0.0133, allocations: 0 / 0.6071 GB, free: 6.742 MB / 0.5261 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 165 * Number of variables: 165 Notification: Performance of Generate backend data structure: time 0.001171/0.01447, allocations: 1.353 MB / 0.6085 GB, free: 5.301 MB / 0.5261 GB Notification: Performance of prepare preOptimizeDAE: time 3.046e-05/0.0145, allocations: 8.031 kB / 0.6085 GB, free: 5.293 MB / 0.5261 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001123/0.01461, allocations: 116.8 kB / 0.6086 GB, free: 5.18 MB / 0.5261 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003354/0.01495, allocations: 329.5 kB / 0.6089 GB, free: 4.828 MB / 0.5261 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.974e-05/0.01499, allocations: 49.69 kB / 0.6089 GB, free: 4.777 MB / 0.5261 GB Notification: Performance of preOpt expandDerOperator (simulation): time 7.775e-05/0.01506, allocations: 92.25 kB / 0.609 GB, free: 4.688 MB / 0.5261 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0005469/0.01561, allocations: 0.6832 MB / 0.6097 GB, free: 3.945 MB / 0.5261 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.392e-05/0.01563, allocations: 7.938 kB / 0.6097 GB, free: 3.938 MB / 0.5261 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.475e-05/0.01567, allocations: 28 kB / 0.6097 GB, free: 3.91 MB / 0.5261 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.148e-05/0.01568, allocations: 16 kB / 0.6097 GB, free: 3.895 MB / 0.5261 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0003466/0.01603, allocations: 432.3 kB / 0.6102 GB, free: 3.438 MB / 0.5261 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001483/0.01751, allocations: 1.382 MB / 0.6115 GB, free: 2.027 MB / 0.5261 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0003758/0.01789, allocations: 453.1 kB / 0.6119 GB, free: 1.543 MB / 0.5261 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.000184/0.01807, allocations: 300.3 kB / 0.6122 GB, free: 1.215 MB / 0.5261 GB Notification: Performance of preOpt evalFunc (simulation): time 2.385e-05/0.01809, allocations: 12.66 kB / 0.6122 GB, free: 1.203 MB / 0.5261 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005368/0.01863, allocations: 0.8639 MB / 0.6131 GB, free: 220 kB / 0.5261 GB Notification: Performance of pre-optimization done (n=99): time 2.044e-06/0.01863, allocations: 0 / 0.6131 GB, free: 220 kB / 0.5261 GB Notification: Performance of matching and sorting (n=105): time 0.3689/0.3876, allocations: 2.183 MB / 0.6152 GB, free: 52.91 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001003/0.3877, allocations: 0.5462 MB / 0.6157 GB, free: 52.28 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003532/0.388, allocations: 453.1 kB / 0.6162 GB, free: 52.16 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 4.792e-05/0.3881, allocations: 59.31 kB / 0.6162 GB, free: 52.13 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001229/0.3882, allocations: 256.8 kB / 0.6165 GB, free: 52.04 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001822/0.3884, allocations: 364.8 kB / 0.6168 GB, free: 51.82 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001806/0.3885, allocations: 184 kB / 0.617 GB, free: 51.8 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 9.501e-05/0.3886, allocations: 405.4 kB / 0.6174 GB, free: 51.49 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002643/0.3889, allocations: 409.7 kB / 0.6178 GB, free: 51.2 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.000308/0.3892, allocations: 0.6923 MB / 0.6185 GB, free: 50.54 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0008229/0.39, allocations: 1.375 MB / 0.6198 GB, free: 49.49 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.452e-06/0.39, allocations: 3.75 kB / 0.6198 GB, free: 49.49 MB / 0.5262 GB Notification: Performance of matching and sorting (n=157) (initialization): time 0.0007981/0.3908, allocations: 1.054 MB / 0.6208 GB, free: 48.87 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 8.153e-05/0.3909, allocations: 262.5 kB / 0.6211 GB, free: 48.59 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.498e-05/0.3909, allocations: 8.844 kB / 0.6211 GB, free: 48.59 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.696e-05/0.391, allocations: 13.88 kB / 0.6211 GB, free: 48.59 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.000553/0.3915, allocations: 255.2 kB / 0.6213 GB, free: 48.57 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.683e-05/0.3915, allocations: 19.62 kB / 0.6214 GB, free: 48.57 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003343/0.3919, allocations: 58.44 kB / 0.6214 GB, free: 48.57 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.611e-05/0.3919, allocations: 39.56 kB / 0.6215 GB, free: 48.57 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: remdesivir.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real remdesivir.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real remdesivir.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real remdesivir.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_704277.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_704277.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_704277.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_704277.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_441524.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real GS_441524.peripheral.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real GS_441524.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_704277.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.peripheral.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.peripheral.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real remdesivir.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real GS_441524.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_441524.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_704277.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean GS_704277.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean remdesivir.peripheral.rising:DISCRETE(fixed = true protected = true ) type: Boolean remdesivir.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 32 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.GS_441524.peripheral.Cmin,GS_441524.peripheral.Cmin,$PRE.GS_441524.peripheral.Cmax,GS_441524.peripheral.Cmax,$PRE.GS_441524.central.Cmin,GS_441524.central.Cmin,$PRE.GS_441524.central.Cmax,GS_441524.central.Cmax,$PRE.GS_704277.peripheral.Cmin,GS_704277.peripheral.Cmin,$PRE.GS_704277.peripheral.Cmax,GS_704277.peripheral.Cmax,$PRE.GS_704277.central.Cmin,GS_704277.central.Cmin,$PRE.GS_704277.central.Cmax,GS_704277.central.Cmax,$PRE.remdesivir.peripheral.Cmin,remdesivir.peripheral.Cmin,$PRE.remdesivir.peripheral.Cmax,remdesivir.peripheral.Cmax,$PRE.remdesivir.central.Cmin,remdesivir.central.Cmin,$PRE.remdesivir.central.Cmax,remdesivir.central.Cmax,$PRE.GS_441524.peripheral.rising,$PRE.GS_441524.periodicDose.pulse.count,$PRE.GS_441524.periodicDose.pulse.T_start,$PRE.GS_441524.central.rising,$PRE.GS_704277.peripheral.rising,$PRE.GS_704277.periodicDose.pulse.count,$PRE.GS_704277.periodicDose.pulse.T_start,$PRE.GS_704277.central.rising,$PRE.remdesivir.peripheral.rising,$PRE.remdesivir.periodicDose.pulse.count,$PRE.remdesivir.periodicDose.pulse.T_start,$PRE.remdesivir.central.rising,GS_441524.peripheral.rising,GS_441524.periodicDose.pulse.count,GS_441524.periodicDose.pulse.T_start,GS_441524.central.rising,GS_704277.peripheral.rising,GS_704277.periodicDose.pulse.count,GS_704277.periodicDose.pulse.T_start,GS_704277.central.rising,remdesivir.peripheral.rising,remdesivir.periodicDose.pulse.count,remdesivir.periodicDose.pulse.T_start,remdesivir.central.rising,$whenCondition12,$whenCondition11,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1,$whenCondition13,$whenCondition14,$whenCondition15) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (148): * Single equations (assignments): 139 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0004577/0.3924, allocations: 0.4923 MB / 0.6219 GB, free: 48.21 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001094/0.3925, allocations: 97.53 kB / 0.622 GB, free: 48.21 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 7.465e-05/0.3926, allocations: 85.98 kB / 0.6221 GB, free: 48.2 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 5.801e-06/0.3926, allocations: 9.938 kB / 0.6221 GB, free: 48.2 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.405e-05/0.3926, allocations: 3.938 kB / 0.6221 GB, free: 48.2 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.218e-06/0.3926, allocations: 4.547 kB / 0.6221 GB, free: 48.2 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001213/0.3938, allocations: 1.288 MB / 0.6234 GB, free: 47.61 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 2.775e-06/0.3938, allocations: 0 / 0.6234 GB, free: 47.61 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.000401/0.3942, allocations: 168.1 kB / 0.6236 GB, free: 47.6 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 4.087e-06/0.3942, allocations: 3.656 kB / 0.6236 GB, free: 47.6 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 3.72e-05/0.3942, allocations: 36.41 kB / 0.6236 GB, free: 47.6 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 3.557e-06/0.3942, allocations: 3.938 kB / 0.6236 GB, free: 47.6 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.363e-06/0.3942, allocations: 0.9375 kB / 0.6236 GB, free: 47.6 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0007714/0.395, allocations: 1.314 MB / 0.6249 GB, free: 46.86 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 8.016e-05/0.3951, allocations: 64.8 kB / 0.6249 GB, free: 46.82 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 8.679e-05/0.3952, allocations: 41.19 kB / 0.625 GB, free: 46.82 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002186/0.3954, allocations: 44.47 kB / 0.625 GB, free: 46.82 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001176/0.3955, allocations: 90.48 kB / 0.6251 GB, free: 46.82 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 2.841e-05/0.3955, allocations: 30.23 kB / 0.6251 GB, free: 46.82 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0001479/0.3957, allocations: 200.8 kB / 0.6253 GB, free: 46.8 MB / 0.5262 GB Notification: Performance of sort global known variables: time 7e-08/0.3957, allocations: 0.75 kB / 0.6253 GB, free: 46.8 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0005073/0.3962, allocations: 255.4 kB / 0.6256 GB, free: 46.8 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 21 (remdesivir.central.C,remdesivir.central.AUC,remdesivir.elim.MExc,remdesivir.periodicDose.TotalCumulativeMass,remdesivir.periodicDose.variableDose.TotalCumulativeMass,remdesivir.peripheral.C,remdesivir.peripheral.AUC,GS_704277.central.C,GS_704277.central.AUC,GS_704277.elim.MExc,GS_704277.periodicDose.TotalCumulativeMass,GS_704277.periodicDose.variableDose.TotalCumulativeMass,GS_704277.peripheral.C,GS_704277.peripheral.AUC,GS_441524.central.C,GS_441524.central.AUC,GS_441524.elim.MExc,GS_441524.periodicDose.TotalCumulativeMass,GS_441524.periodicDose.variableDose.TotalCumulativeMass,GS_441524.peripheral.C,GS_441524.peripheral.AUC) * Number of discrete variables: 39 ($whenCondition15,$whenCondition14,$whenCondition13,$whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,$whenCondition11,$whenCondition12,remdesivir.central.Cmax,remdesivir.central.Cmin,remdesivir.central.rising,remdesivir.periodicDose.pulse.T_start,remdesivir.periodicDose.pulse.count,remdesivir.peripheral.Cmax,remdesivir.peripheral.Cmin,remdesivir.peripheral.rising,GS_704277.central.Cmax,GS_704277.central.Cmin,GS_704277.central.rising,GS_704277.periodicDose.pulse.T_start,GS_704277.periodicDose.pulse.count,GS_704277.peripheral.Cmax,GS_704277.peripheral.Cmin,GS_704277.peripheral.rising,GS_441524.central.Cmax,GS_441524.central.Cmin,GS_441524.central.rising,GS_441524.periodicDose.pulse.T_start,GS_441524.periodicDose.pulse.count,GS_441524.peripheral.Cmax,GS_441524.peripheral.Cmin,GS_441524.peripheral.rising) * Number of discrete states: 33 (remdesivir.periodicDose.pulse.count,GS_704277.periodicDose.pulse.count,GS_441524.periodicDose.pulse.count,GS_441524.peripheral.Cmin,$whenCondition12,GS_441524.peripheral.Cmax,$whenCondition11,GS_441524.peripheral.rising,GS_441524.central.Cmin,$whenCondition10,GS_441524.central.Cmax,$whenCondition9,GS_441524.central.rising,GS_704277.peripheral.Cmin,$whenCondition8,GS_704277.peripheral.Cmax,$whenCondition7,GS_704277.peripheral.rising,GS_704277.central.Cmin,$whenCondition6,GS_704277.central.Cmax,$whenCondition5,GS_704277.central.rising,remdesivir.peripheral.Cmin,$whenCondition4,remdesivir.peripheral.Cmax,$whenCondition3,remdesivir.peripheral.rising,remdesivir.central.Cmin,$whenCondition2,remdesivir.central.Cmax,$whenCondition1,remdesivir.central.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001707/0.3964, allocations: 169.5 kB / 0.6257 GB, free: 46.72 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0006954/0.3971, allocations: 1.406 MB / 0.6271 GB, free: 45.63 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 9.047e-06/0.3971, allocations: 6.594 kB / 0.6271 GB, free: 45.63 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004099/0.3975, allocations: 0.7761 MB / 0.6279 GB, free: 45.04 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0006023/0.3981, allocations: 264 kB / 0.6281 GB, free: 45.02 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002941/0.401, allocations: 1.914 MB / 0.63 GB, free: 44.08 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001295/0.4012, allocations: 174.8 kB / 0.6302 GB, free: 43.96 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.0003127/0.4015, allocations: 87.25 kB / 0.6302 GB, free: 43.93 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004888/0.402, allocations: 324.5 kB / 0.6306 GB, free: 43.85 MB / 0.5262 GB Notification: Performance of SimCode: time 1.102e-06/0.402, allocations: 0 / 0.6306 GB, free: 43.85 MB / 0.5262 GB Notification: Performance of Templates: time 0.01836/0.4203, allocations: 14.48 MB / 0.6447 GB, free: 37.27 MB / 0.5262 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.sim & ./Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 5.434985691215843]