Environment - simulationEnvironment:
startTime=0
stopTime=15000
tolerance=1e-06
numberOfIntervals=2500
stepSize=6
Regular simulation: ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Allosteric_Hemoglobin2_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS
LOG_STDOUT        | warning | Numerical Jacobians without coloring are currently not supported by GBODE. Colored numerical Jacobian will be used.
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14347:5-14348:37:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((solution.mass >= 0.0 and solution.mass <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= solution.mass <= 0.0, has value: 1.00007"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((R0_in_R.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= R0_in_R.subunitSolution.nj, has value: -6.5552e-07"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((R0_in_R.subunitSolution.mj >= 0.0 and R0_in_R.subunitSolution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= R0_in_R.subunitSolution.mj <= 0.0, has value: -1.18094e-08"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14161:5-14162:124:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((T0_in_T.subunitSolution.nj >= 0.0)) --> "Variable violating min constraint: 0.0 <= T0_in_T.subunitSolution.nj, has value: -0.00399934"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14166:5-14167:122:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((T0_in_T.subunitSolution.mj >= 0.0 and T0_in_T.subunitSolution.mj <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= T0_in_T.subunitSolution.mj <= 0.0, has value: -7.20493e-05"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14160:5-14160:67:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((DeoxyRHm[1].solution.n >= 0.0 and DeoxyRHm[1].solution.n <= 0.0)) --> "Variable violating min/max constraint: 0.0 <= DeoxyRHm[1].solution.n <= 0.0, has value: 1.01629"
LOG_ASSERT        | warning | [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:379:7-381:72:writable]
|                 | |       | The following assertion has been violated at time 0.000000
|                 | |       | ((H2O.SelfClustering_K >= 0.0 and H2O.SelfClustering_K <= 1.0)) --> "Variable violating min/max constraint: 0.0 <= H2O.SelfClustering_K <= 1.0, has value: 53.7264"
LOG_SUCCESS       | info    | The initialization finished successfully without homotopy method.
LOG_STATS         | info    | gbode (single-rate integration): radauIIA3
LOG_STATS         | info    | ### STATISTICS ###
|                 | |       | | timer
|                 | |       | | |    0.0127381s          reading init.xml
|                 | |       | | |   0.00111391s          reading info.xml
|                 | |       | | |  0.000180169s [  0.4%] pre-initialization
|                 | |       | | |  0.000275819s [  0.7%] initialization
|                 | |       | | |   1.9848e-05s [  0.0%] steps
|                 | |       | | |            0s [  0.0%] solver (excl. callbacks)
|                 | |       | | |            0s [  0.0%] creating output-file
|                 | |       | | |  0.000252351s [  0.6%] event-handling
|                 | |       | | |   0.00154059s [  3.7%] overhead
|                 | |       | | |    0.0390517s [ 94.5%] simulation
|                 | |       | | |    0.0413204s [100.0%] total
|                 | |       | | events
|                 | |       | | |    15 state events
|                 | |       | | |     0 time events
|                 | |       | | solver: gbode
|                 | |       | | |   659 steps taken
|                 | |       | | |  8176 calls of functionODE
|                 | |       | | |   804 evaluations of jacobian
|                 | |       | | |     0 error test failures
|                 | |       | | |   321 convergence test failures
|                 | |       | | | 0.0121843s time of jacobian evaluation
LOG_SUCCESS       | info    | The simulation finished successfully.