Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001245/0.001245, allocations: 80.94 kB / 19.94 MB, free: 4.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001558/0.001558, allocations: 177 kB / 23.36 MB, free: 1.133 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.008/1.008, allocations: 177.1 MB / 203.8 MB, free: 5.492 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.08367/0.08367, allocations: 17.47 MB / 277.7 MB, free: 11.45 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.183e-06/1.183e-06, allocations: 0 / 300.7 MB, free: 1.758 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 9.969e-06/1.115e-05, allocations: 3.859 kB / 300.7 MB, free: 1.754 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.03478/0.03479, allocations: 41.65 MB / 342.4 MB, free: 10.73 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01482/0.04961, allocations: 11.17 MB / 353.5 MB, free: 15.51 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002218/0.05183, allocations: 87.31 kB / 353.6 MB, free: 15.42 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003419/0.05525, allocations: 2.036 MB / 355.7 MB, free: 13.38 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.002767/0.05801, allocations: 1.555 MB / 357.2 MB, free: 11.81 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.006119/0.06413, allocations: 4.336 MB / 361.6 MB, free: 7.453 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.003617/0.06775, allocations: 3.627 MB / 365.2 MB, free: 3.809 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001039/0.06879, allocations: 0.5818 MB / 365.8 MB, free: 3.164 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002065/0.07085, allocations: 2.05 MB / 367.8 MB, free: 1.109 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001316/0.07217, allocations: 1.582 MB / 369.4 MB, free: 15.52 MB / 346.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0002493/0.07242, allocations: 312 kB / 369.7 MB, free: 15.22 MB / 346.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.002911/0.07533, allocations: 2.02 MB / 371.7 MB, free: 13.2 MB / 346.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0008309/0.07616, allocations: 1.094 MB / 372.8 MB, free: 12.1 MB / 346.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007934/0.07695, allocations: 1.15 MB / 374 MB, free: 10.95 MB / 346.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.003884/0.08084, allocations: 4.843 MB / 378.8 MB, free: 6.086 MB / 346.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.105e-06/0.08084, allocations: 0 / 378.8 MB, free: 6.086 MB / 346.7 MB
Notification: Performance of FrontEnd: time 1.032e-06/0.08084, allocations: 0 / 378.8 MB, free: 6.086 MB / 346.7 MB
Notification: Performance of Transformations before backend: time 2.615e-05/0.08087, allocations: 0 / 378.8 MB, free: 6.086 MB / 346.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.004039/0.08491, allocations: 4.111 MB / 382.9 MB, free: 1.926 MB / 346.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.584e-05/0.08494, allocations: 12.02 kB / 382.9 MB, free: 1.914 MB / 346.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.001696/0.08664, allocations: 1.57 MB / 384.5 MB, free: 352 kB / 346.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001416/0.08805, allocations: 1.342 MB / 385.8 MB, free: 14.95 MB / 362.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002562/0.08831, allocations: 0.4994 MB / 386.3 MB, free: 14.39 MB / 362.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002569/0.08857, allocations: 300.3 kB / 386.6 MB, free: 14.1 MB / 362.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003359/0.09193, allocations: 3.808 MB / 390.4 MB, free: 10.25 MB / 362.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.603e-05/0.09196, allocations: 192 / 390.4 MB, free: 10.25 MB / 362.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001428/0.09211, allocations: 124.1 kB / 390.6 MB, free: 10.13 MB / 362.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0003116/0.09242, allocations: 466.8 kB / 391 MB, free: 9.672 MB / 362.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.003748/0.09617, allocations: 4.536 MB / 395.6 MB, free: 5.125 MB / 362.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01209/0.1083, allocations: 11.72 MB / 407.3 MB, free: 9.32 MB / 378.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001167/0.1094, allocations: 0.9995 MB / 408.3 MB, free: 8.312 MB / 378.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0009987/0.1104, allocations: 0.58 MB / 408.9 MB, free: 7.73 MB / 378.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.008159/0.1186, allocations: 7.399 MB / 416.3 MB, free: 316 kB / 378.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.951e-05/0.1186, allocations: 55.81 kB / 416.3 MB, free: 252 kB / 378.7 MB
Notification: Performance of pre-optimization done (n=188): time 2.544e-06/0.1186, allocations: 0 / 416.3 MB, free: 252 kB / 378.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 1.8567258762195706]