Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009591/0.0009591, allocations: 80.75 kB / 19.94 MB, free: 4.547 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001064/0.001064, allocations: 181 kB / 23.36 MB, free: 1.133 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9397/0.9397, allocations: 177.1 MB / 203.8 MB, free: 5.473 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.09076/0.09076, allocations: 17.38 MB / 277.6 MB, free: 11.52 MB / 266.7 MB " [Timeout remaining time 180] Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") translateModel(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.903e-06/1.903e-06, allocations: 1.375 kB / 300.6 MB, free: 1.855 MB / 266.7 MB Notification: Performance of FrontEnd - Absyn->SCode: time 2.137e-05/2.327e-05, allocations: 2.312 kB / 300.6 MB, free: 1.852 MB / 266.7 MB [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: Your model is using an outer \"system\" component but an inner \"system\" component is not defined. For simulation drag Modelica.Fluid.System into your model to specify system properties. Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery): time 0.04101/0.04104, allocations: 49.35 MB / 350 MB, free: 3.184 MB / 314.7 MB Notification: Performance of NFInst.instExpressions: time 0.02738/0.06841, allocations: 26.23 MB / 376.2 MB, free: 8.855 MB / 346.7 MB Notification: Performance of NFInst.updateImplicitVariability: time 0.003795/0.07221, allocations: 79.31 kB / 376.3 MB, free: 8.777 MB / 346.7 MB Notification: Performance of NFTyping.typeComponents: time 0.002742/0.07495, allocations: 0.964 MB / 377.3 MB, free: 7.805 MB / 346.7 MB Notification: Performance of NFTyping.typeBindings: time 0.008282/0.08323, allocations: 3.346 MB / 380.6 MB, free: 4.434 MB / 346.7 MB Notification: Performance of NFTyping.typeClassSections: time 0.009428/0.09266, allocations: 5.002 MB / 385.6 MB, free: 15.41 MB / 362.7 MB Notification: Performance of NFFlatten.flatten: time 0.02456/0.1172, allocations: 27.38 MB / 413 MB, free: 3.926 MB / 378.7 MB Notification: Performance of NFFlatten.resolveConnections: time 0.02019/0.1374, allocations: 17.26 MB / 430.3 MB, free: 2.52 MB / 394.7 MB Notification: Performance of NFEvalConstants.evaluate: time 0.3214/0.4588, allocations: 23 MB / 453.3 MB, free: 49.24 MB / 410.8 MB Notification: Performance of NFSimplifyModel.simplify: time 0.02958/0.4884, allocations: 16.44 MB / 469.7 MB, free: 49.24 MB / 410.8 MB Notification: Performance of NFPackage.collectConstants: time 0.01802/0.5064, allocations: 3.127 MB / 472.8 MB, free: 49.24 MB / 410.8 MB Notification: Performance of NFFlatten.collectFunctions: time 0.02578/0.5322, allocations: 5.236 MB / 478.1 MB, free: 49.24 MB / 410.8 MB Notification: Performance of NFScalarize.scalarize: time 0.01579/0.548, allocations: 7.158 MB / 485.2 MB, free: 49.24 MB / 410.8 MB Notification: Performance of NFVerifyModel.verify: time 0.02245/0.5704, allocations: 9.414 MB / 494.6 MB, free: 48.58 MB / 410.8 MB Notification: Performance of NFConvertDAE.convert: time 0.04156/0.612, allocations: 27.24 MB / 0.5096 GB, free: 32.88 MB / 410.8 MB Notification: Performance of FrontEnd - DAE generated: time 1.039e-05/0.612, allocations: 4 kB / 0.5096 GB, free: 32.87 MB / 410.8 MB Notification: Performance of FrontEnd: time 1.783e-06/0.612, allocations: 0 / 0.5096 GB, free: 32.87 MB / 410.8 MB Notification: Performance of Transformations before backend: time 0.0009819/0.613, allocations: 0 / 0.5096 GB, free: 32.87 MB / 410.8 MB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 3808 * Number of variables: 3808 Notification: Performance of Generate backend data structure: time 0.06766/0.6807, allocations: 19.2 MB / 0.5284 GB, free: 14.71 MB / 410.8 MB Notification: Performance of prepare preOptimizeDAE: time 3.795e-05/0.6807, allocations: 12.02 kB / 0.5284 GB, free: 14.7 MB / 410.8 MB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02001/0.7007, allocations: 6.243 MB / 0.5345 GB, free: 8.547 MB / 410.8 MB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0145/0.7152, allocations: 6.595 MB / 0.5409 GB, free: 2.41 MB / 410.8 MB Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.00153/0.7167, allocations: 3.05 MB / 0.5439 GB, free: 14.92 MB / 426.8 MB Notification: Performance of preOpt expandDerOperator (simulation): time 0.006335/0.7231, allocations: 1.527 MB / 0.5454 GB, free: 13.41 MB / 426.8 MB Notification: Performance of preOpt clockPartitioning (simulation): time 0.04183/0.7649, allocations: 17.57 MB / 0.5626 GB, free: 12.2 MB / 442.8 MB Notification: Performance of preOpt findStateOrder (simulation): time 0.0003914/0.7653, allocations: 14.83 kB / 0.5626 GB, free: 12.19 MB / 442.8 MB Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.004212/0.7695, allocations: 0.5902 MB / 0.5632 GB, free: 11.6 MB / 442.8 MB Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0001994/0.7697, allocations: 363.9 kB / 0.5635 GB, free: 11.25 MB / 442.8 MB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.04136/0.8111, allocations: 15.27 MB / 0.5784 GB, free: 12 MB / 458.8 MB Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts. Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.4134/1.224, allocations: 53.66 MB / 0.6308 GB, free: 97.71 MB / 474.9 MB Notification: Performance of preOpt comSubExp (simulation): time 0.5714/1.796, allocations: 299.2 MB / 0.923 GB, free: 54.05 MB / 0.495 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.01327/1.809, allocations: 5.447 MB / 0.9283 GB, free: 48.75 MB / 0.495 GB Notification: Performance of preOpt evalFunc (simulation): time 0.08054/1.89, allocations: 27.9 MB / 0.9556 GB, free: 22.76 MB / 0.495 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 8.532e-05/1.89, allocations: 139.9 kB / 0.9557 GB, free: 22.62 MB / 0.495 GB Notification: Performance of preOpt simplifyInStream (simulation): time 0.01616/1.906, allocations: 5.731 MB / 0.9613 GB, free: 17.73 MB / 0.495 GB Notification: Performance of pre-optimization done (n=983): time 5.846e-05/1.906, allocations: 0 / 0.9613 GB, free: 17.73 MB / 0.495 GB Notification: Performance of matching and sorting (n=1117): time 0.4642/2.37, allocations: 60.37 MB / 1.02 GB, free: 131.1 MB / 0.495 GB Notification: Performance of inlineWhenForInitialization (initialization): time 9.585e-05/2.37, allocations: 165.4 kB / 1.02 GB, free: 131 MB / 0.495 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.006394/2.377, allocations: 7.576 MB / 1.028 GB, free: 129.4 MB / 0.495 GB Notification: Performance of collectPreVariables (initialization): time 0.00284/2.379, allocations: 214.7 kB / 1.028 GB, free: 129.4 MB / 0.495 GB Notification: Performance of collectInitialEqns (initialization): time 0.002124/2.382, allocations: 5.732 MB / 1.034 GB, free: 126.1 MB / 0.495 GB Notification: Performance of collectInitialBindings (initialization): time 0.003764/2.385, allocations: 4.031 MB / 1.038 GB, free: 123.7 MB / 0.495 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.003532/2.389, allocations: 2.779 MB / 1.04 GB, free: 123 MB / 0.495 GB Notification: Performance of setup shared object (initialization): time 3.09e-05/2.389, allocations: 310.3 kB / 1.041 GB, free: 122.7 MB / 0.495 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.003753/2.393, allocations: 2.944 MB / 1.043 GB, free: 121.3 MB / 0.495 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.004366/2.397, allocations: 7.188 MB / 1.05 GB, free: 112.6 MB / 0.495 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.009532/2.407, allocations: 12.11 MB / 1.062 GB, free: 99.62 MB / 0.495 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.664e-05/2.407, allocations: 40 kB / 1.062 GB, free: 99.58 MB / 0.495 GB Notification: Performance of matching and sorting (n=1861) (initialization): time 0.1581/2.565, allocations: 37.01 MB / 1.098 GB, free: 65 MB / 0.495 GB Notification: Performance of prepare postOptimizeDAE: time 8.534e-05/2.565, allocations: 68 kB / 1.099 GB, free: 64.93 MB / 0.495 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0001276/2.565, allocations: 144 kB / 1.099 GB, free: 64.79 MB / 0.495 GB Notification: Performance of postOpt tearingSystem (initialization): time 0.07565/2.641, allocations: 46.08 MB / 1.144 GB, free: 18.95 MB / 0.495 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.009046/2.65, allocations: 3.465 MB / 1.147 GB, free: 15.71 MB / 0.495 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2063/2.856, allocations: 18.95 MB / 1.166 GB, free: 119.9 MB / 0.495 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.01143/2.867, allocations: 473.8 kB / 1.166 GB, free: 119.9 MB / 0.495 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.001964/2.869, allocations: 0.7072 MB / 1.167 GB, free: 119.9 MB / 0.495 GB Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 661 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (1813): * Single equations (assignments): 1810 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of prepare postOptimizeDAE: time 0.005008/2.874, allocations: 1.02 MB / 1.168 GB, free: 119.8 MB / 0.495 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.002397/2.877, allocations: 0.9249 MB / 1.169 GB, free: 119.8 MB / 0.495 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.09748/2.974, allocations: 24.2 MB / 1.192 GB, free: 119.3 MB / 0.495 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.87e-05/2.974, allocations: 122.7 kB / 1.192 GB, free: 119.3 MB / 0.495 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 4.966e-05/2.974, allocations: 19.69 kB / 1.192 GB, free: 119.3 MB / 0.495 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0002983/2.975, allocations: 61.08 kB / 1.192 GB, free: 119.3 MB / 0.495 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.1153/3.09, allocations: 32.99 MB / 1.225 GB, free: 108.2 MB / 0.495 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 7.682e-05/3.09, allocations: 7.188 kB / 1.225 GB, free: 108.2 MB / 0.495 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.007396/3.098, allocations: 2.216 MB / 1.227 GB, free: 107.7 MB / 0.495 GB Notification: Performance of postOpt tearingSystem (simulation): time 0.03924/3.137, allocations: 15.25 MB / 1.242 GB, free: 96.2 MB / 0.495 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.00263/3.139, allocations: 407.5 kB / 1.242 GB, free: 95.8 MB / 0.495 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.03265/3.172, allocations: 11.29 MB / 1.253 GB, free: 84.47 MB / 0.495 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.476e-06/3.172, allocations: 4 kB / 1.253 GB, free: 84.47 MB / 0.495 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.1034/3.275, allocations: 28.15 MB / 1.281 GB, free: 56.49 MB / 0.495 GB Notification: Performance of postOpt removeConstants (simulation): time 0.005016/3.28, allocations: 1.39 MB / 1.282 GB, free: 55.61 MB / 0.495 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.001559/3.282, allocations: 291.8 kB / 1.282 GB, free: 55.32 MB / 0.495 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.003993/3.286, allocations: 259.9 kB / 1.283 GB, free: 55.07 MB / 0.495 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.002029/3.288, allocations: 1.175 MB / 1.284 GB, free: 53.89 MB / 0.495 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0007573/3.289, allocations: 335.6 kB / 1.284 GB, free: 53.56 MB / 0.495 GB Notification: Performance of sorting global known variables: time 0.003089/3.292, allocations: 3.783 MB / 1.288 GB, free: 50.17 MB / 0.495 GB Notification: Performance of sort global known variables: time 1.71e-07/3.292, allocations: 0 / 1.288 GB, free: 50.17 MB / 0.495 GB Notification: Performance of remove unused functions: time 0.01165/3.304, allocations: 5.232 MB / 1.293 GB, free: 45.09 MB / 0.495 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 15 * Number of states: 60 (solution.temperature,O2_free.logn,H2O.logn,relaxed.OxyHm[1].logn,relaxed.OxyHm[2].logn,relaxed.OxyHm[3].logn,relaxed.OxyHm[4].logn,relaxed.DeoxyHm[1].logn,relaxed.DeoxyHm[2].logn,relaxed.DeoxyHm[3].logn,relaxed.DeoxyHm[4].logn,relaxed.HmAH[1].logn,relaxed.HmAH[2].logn,relaxed.HmAH[3].logn,relaxed.HmAH[4].logn,relaxed.HmA[1].logn,relaxed.HmA[2].logn,relaxed.HmA[3].logn,relaxed.HmA[4].logn,relaxed.HmNH3[1].logn,relaxed.HmNH3[2].logn,relaxed.HmNH3[3].logn,relaxed.HmNH3[4].logn,relaxed.HmNH2[1].logn,relaxed.HmNH2[2].logn,relaxed.HmNH2[3].logn,relaxed.HmNH2[4].logn,relaxed.HmNHCOO[1].logn,relaxed.HmNHCOO[2].logn,relaxed.HmNHCOO[3].logn,relaxed.HmNHCOO[4].logn,tensed.OxyHm[1].logn,tensed.OxyHm[2].logn,tensed.OxyHm[3].logn,tensed.OxyHm[4].logn,tensed.DeoxyHm[1].logn,tensed.DeoxyHm[2].logn,tensed.DeoxyHm[3].logn,tensed.DeoxyHm[4].logn,tensed.HmAH[1].logn,tensed.HmAH[2].logn,tensed.HmAH[3].logn,tensed.HmAH[4].logn,tensed.HmA[1].logn,tensed.HmA[2].logn,tensed.HmA[3].logn,tensed.HmA[4].logn,tensed.HmNH3[1].logn,tensed.HmNH3[2].logn,tensed.HmNH3[3].logn,tensed.HmNH3[4].logn,tensed.HmNH2[1].logn,tensed.HmNH2[2].logn,tensed.HmNH2[3].logn,tensed.HmNH2[4].logn,tensed.HmNHCOO[1].logn,tensed.HmNHCOO[2].logn,tensed.HmNHCOO[3].logn,tensed.HmNHCOO[4].logn,CO2_free.logn) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (1222): * Single equations (assignments): 1219 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 3 * Mixed (continuous/discrete) equation systems: 0 Notification: Torn system details for strict tearing set: * Linear torn systems (#iteration vars, #inner vars, density): 2 systems {(1,3,100.0%), (33,10,82.4%)} * Non-linear torn systems (#iteration vars, #inner vars): 1 system {(1,3)} Notification: Performance of Backend phase and start with SimCode phase: time 0.001953/3.305, allocations: 1.408 MB / 1.294 GB, free: 44.07 MB / 0.495 GB Notification: Performance of simCode: created initialization part: time 0.0191/3.325, allocations: 10.1 MB / 1.304 GB, free: 34.59 MB / 0.495 GB Notification: Performance of simCode: created event and clocks part: time 0.0001816/3.325, allocations: 144.7 kB / 1.304 GB, free: 34.44 MB / 0.495 GB Notification: Performance of simCode: created simulation system equations: time 0.01041/3.335, allocations: 5.424 MB / 1.309 GB, free: 29.32 MB / 0.495 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.006659/3.342, allocations: 2.591 MB / 1.312 GB, free: 27 MB / 0.495 GB Error: Error parsing unit kDa: Unit not found Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1902/3.532, allocations: 28.05 MB / 1.339 GB, free: 126 MB / 0.495 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.004128/3.536, allocations: 3.488 MB / 1.343 GB, free: 125.5 MB / 0.495 GB Notification: Performance of simCode: alias equations: time 0.007704/3.544, allocations: 1.723 MB / 1.344 GB, free: 125.4 MB / 0.495 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.006822/3.551, allocations: 2.676 MB / 1.347 GB, free: 125.3 MB / 0.495 GB Notification: Performance of SimCode: time 1.362e-06/3.551, allocations: 0 / 1.347 GB, free: 125.3 MB / 0.495 GB Notification: Performance of Templates: time 0.4195/3.97, allocations: 311.2 MB / 1.651 GB, free: 51.21 MB / 0.5107 GB " [Timeout remaining time 656] make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.makefile [Timeout 660] (rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery -abortSlowSimulation -alarm=240 -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.HemoglobinMultipleAllostery.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 12.545997297856957]