Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009383/0.0009383, allocations: 80.94 kB / 19.94 MB, free: 4.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001691/0.001691, allocations: 173 kB / 23.36 MB, free: 1.133 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9533/0.9533, allocations: 177.2 MB / 203.8 MB, free: 5.473 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.05409/0.05409, allocations: 12.76 MB / 273 MB, free: 164 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC")
translateModel(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.503e-06/1.503e-06, allocations: 0 / 294 MB, free: 11.9 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.901e-05/2.051e-05, allocations: 2.859 kB / 294 MB, free: 11.9 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC): time 0.007049/0.007069, allocations: 10.43 MB / 304.5 MB, free: 4.809 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01278/0.01985, allocations: 11.26 MB / 315.7 MB, free: 11.3 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001698/0.02155, allocations: 102.9 kB / 315.8 MB, free: 11.2 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0006882/0.02224, allocations: 408 kB / 316.2 MB, free: 10.8 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.readReal' contains a call to impure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.UnitConversions.findUnit'.
Notification: Performance of NFTyping.typeBindings: time 0.005012/0.02725, allocations: 2.217 MB / 318.4 MB, free: 8.574 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R2.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R3.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.T4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R4.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.R0.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.oxygen_unbound.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.003623/0.03087, allocations: 2.017 MB / 320.5 MB, free: 6.562 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002679/0.03355, allocations: 2.873 MB / 323.3 MB, free: 3.676 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0005607/0.03411, allocations: 412.6 kB / 323.7 MB, free: 3.234 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001519/0.03563, allocations: 1.371 MB / 325.1 MB, free: 1.859 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001228/0.03686, allocations: 1.208 MB / 326.3 MB, free: 0.6484 MB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003099/0.03717, allocations: 144 kB / 326.5 MB, free: 0.5078 MB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0004069/0.03758, allocations: 159.9 kB / 326.6 MB, free: 360 kB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003405/0.03792, allocations: 0.5526 MB / 327.2 MB, free: 15.8 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005734/0.03849, allocations: 0.7012 MB / 327.9 MB, free: 15.09 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001379/0.03987, allocations: 1.872 MB / 329.7 MB, free: 13.21 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 3.827e-06/0.03987, allocations: 0 / 329.7 MB, free: 13.21 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.263e-06/0.03987, allocations: 0 / 329.7 MB, free: 13.21 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 4.519e-05/0.03992, allocations: 0 / 329.7 MB, free: 13.21 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 287
 * Number of variables: 287
Notification: Performance of Generate backend data structure: time 0.002807/0.04273, allocations: 2.443 MB / 332.2 MB, free: 10.73 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.21e-05/0.04276, allocations: 11.98 kB / 332.2 MB, free: 10.72 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.000631/0.04339, allocations: 328.6 kB / 332.5 MB, free: 10.4 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001427/0.04482, allocations: 1.176 MB / 333.7 MB, free: 9.184 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 4.449e-05/0.04486, allocations: 86.64 kB / 333.8 MB, free: 9.098 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001159/0.04498, allocations: 120.4 kB / 333.9 MB, free: 8.98 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.0008036/0.04578, allocations: 0.8106 MB / 334.7 MB, free: 8.125 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.869e-05/0.0458, allocations: 7.938 kB / 334.7 MB, free: 8.117 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 6.346e-05/0.04586, allocations: 44 kB / 334.8 MB, free: 8.074 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.763e-05/0.04588, allocations: 28 kB / 334.8 MB, free: 8.047 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.000463/0.04634, allocations: 358.6 kB / 335.1 MB, free: 7.684 MB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003629/0.04997, allocations: 2.517 MB / 337.6 MB, free: 5.109 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0004314/0.0504, allocations: 436.5 kB / 338.1 MB, free: 4.664 MB / 298.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0002113/0.05062, allocations: 195.6 kB / 338.3 MB, free: 4.469 MB / 298.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 4.483e-05/0.05066, allocations: 17 kB / 338.3 MB, free: 4.453 MB / 298.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.761e-05/0.05069, allocations: 51.44 kB / 338.3 MB, free: 4.395 MB / 298.7 MB
Notification: Performance of pre-optimization done (n=98): time 2.535e-06/0.05069, allocations: 0 / 338.3 MB, free: 4.395 MB / 298.7 MB
Notification: Performance of matching and sorting (n=98): time 0.01225/0.06294, allocations: 4.29 MB / 342.6 MB, free: 84 kB / 298.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 5.279e-05/0.063, allocations: 90.11 kB / 342.7 MB, free: 15.98 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.001032/0.06403, allocations: 1.385 MB / 344.1 MB, free: 14.55 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 5.093e-05/0.06408, allocations: 45.7 kB / 344.1 MB, free: 14.5 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0005306/0.06461, allocations: 0.6124 MB / 344.7 MB, free: 13.88 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.000202/0.06481, allocations: 360.9 kB / 345.1 MB, free: 13.52 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002238/0.06504, allocations: 251.3 kB / 345.3 MB, free: 13.27 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 8.532e-05/0.06512, allocations: 361.8 kB / 345.7 MB, free: 12.91 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0002051/0.06533, allocations: 142.8 kB / 345.8 MB, free: 12.77 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0003546/0.06568, allocations: 0.5072 MB / 346.3 MB, free: 12.1 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0006522/0.06633, allocations: 0.7746 MB / 347.1 MB, free: 11.16 MB / 314.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 9.668e-06/0.06634, allocations: 8 kB / 347.1 MB, free: 11.16 MB / 314.7 MB
Notification: Performance of matching and sorting (n=173) (initialization): time 0.002637/0.06898, allocations: 1.392 MB / 348.5 MB, free: 9.75 MB / 314.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.997e-05/0.069, allocations: 8 kB / 348.5 MB, free: 9.742 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.611e-05/0.06902, allocations: 15.98 kB / 348.5 MB, free: 9.727 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.003487/0.0725, allocations: 1.136 MB / 349.7 MB, free: 8.586 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0003919/0.0729, allocations: 223.6 kB / 349.9 MB, free: 8.367 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.005811/0.07871, allocations: 4.183 MB / 354.1 MB, free: 4.113 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0006861/0.07939, allocations: 158.9 kB / 354.2 MB, free: 3.957 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 5.493e-05/0.07945, allocations: 47.98 kB / 354.3 MB, free: 3.91 MB / 314.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 52
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (115):
 * Single equations (assignments): 114
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of prepare postOptimizeDAE: time 0.0002692/0.07972, allocations: 188.3 kB / 354.5 MB, free: 3.715 MB / 314.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001564/0.07987, allocations: 131.9 kB / 354.6 MB, free: 3.586 MB / 314.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001819/0.08005, allocations: 227.7 kB / 354.8 MB, free: 3.355 MB / 314.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.302e-06/0.08006, allocations: 8 kB / 354.8 MB, free: 3.348 MB / 314.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.068e-06/0.08006, allocations: 0 / 354.8 MB, free: 3.348 MB / 314.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.704e-06/0.08007, allocations: 7.922 kB / 354.8 MB, free: 3.34 MB / 314.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0008205/0.08089, allocations: 0.7023 MB / 355.5 MB, free: 2.617 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.396e-06/0.0809, allocations: 4 kB / 355.5 MB, free: 2.613 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0001795/0.08108, allocations: 75.91 kB / 355.6 MB, free: 2.539 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.004209/0.08529, allocations: 1.099 MB / 356.7 MB, free: 1.434 MB / 314.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001251/0.08541, allocations: 23.94 kB / 356.7 MB, free: 1.41 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.005911/0.09132, allocations: 4.063 MB / 360.8 MB, free: 13.25 MB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.816e-06/0.09132, allocations: 7.922 kB / 360.8 MB, free: 13.24 MB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.002879/0.0942, allocations: 1.46 MB / 362.3 MB, free: 11.76 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0004303/0.09463, allocations: 229 kB / 362.5 MB, free: 11.53 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001234/0.09476, allocations: 28.02 kB / 362.5 MB, free: 11.5 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003639/0.09512, allocations: 35.89 kB / 362.6 MB, free: 11.47 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001334/0.09525, allocations: 89.25 kB / 362.6 MB, free: 11.38 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.043e-05/0.09528, allocations: 16 kB / 362.7 MB, free: 11.36 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0005311/0.09582, allocations: 0.7043 MB / 363.4 MB, free: 10.63 MB / 330.7 MB
Notification: Performance of sort global known variables: time 8e-08/0.09582, allocations: 0 / 363.4 MB, free: 10.63 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001232/0.09705, allocations: 0.6518 MB / 364 MB, free: 9.98 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 1 (hemoglobinConservationLaw.state[1])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (40):
 * Single equations (assignments): 39
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 1
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(10,49)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001601/0.09721, allocations: 92.36 kB / 364.1 MB, free: 9.883 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.001761/0.09897, allocations: 1.184 MB / 365.3 MB, free: 8.688 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 2.096e-05/0.09899, allocations: 20.5 kB / 365.3 MB, free: 8.668 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001197/0.1002, allocations: 0.8667 MB / 366.2 MB, free: 7.781 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008118/0.101, allocations: 324.1 kB / 366.5 MB, free: 7.473 MB / 330.7 MB
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Error: Error parsing unit %: Parse error
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003553/0.1046, allocations: 2.843 MB / 369.3 MB, free: 4.59 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.000302/0.1049, allocations: 395.3 kB / 369.7 MB, free: 4.18 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.0003056/0.1052, allocations: 142.9 kB / 369.9 MB, free: 4.035 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0004076/0.1056, allocations: 305.1 kB / 370.2 MB, free: 3.734 MB / 330.7 MB
Notification: Performance of SimCode: time 4.51e-07/0.1056, allocations: 4 kB / 370.2 MB, free: 3.73 MB / 330.7 MB
Notification: Performance of Templates: time 0.03881/0.1444, allocations: 39.88 MB / 410 MB, free: 12.21 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; mkfifo Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe ; head -c 1048576 < Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe >> ../files/Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.sim & ./Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.SteadyStates.Examples.Allosteric_Hemoglobin_MWC.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 3.892581305000931]