Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001429/0.001429, allocations: 80.75 kB / 19.94 MB, free: 4.547 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001455/0.001455, allocations: 181 kB / 23.36 MB, free: 1.133 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.964/0.964, allocations: 177.1 MB / 203.8 MB, free: 5.484 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.06808/0.06808, allocations: 12.76 MB / 273 MB, free: 168 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments")
translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.252e-06/1.252e-06, allocations: 0 / 293.9 MB, free: 12.07 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.25e-05/1.376e-05, allocations: 4.156 kB / 293.9 MB, free: 12.06 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.TwoConcentrationCompartments): time 0.003363/0.003377, allocations: 3.748 MB / 297.6 MB, free: 9.539 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.003719/0.007096, allocations: 3.078 MB / 300.7 MB, free: 7.582 MB / 266.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0002193/0.007316, allocations: 18.75 kB / 300.7 MB, free: 7.57 MB / 266.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0001893/0.007505, allocations: 65.44 kB / 300.8 MB, free: 7.531 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Hydraulic.mo:1482:17-1484:29:writable] Warning: In relation resistor.Resistance == 0.0, == on Real operands is deprecated in non-function contexts.
Notification: Performance of NFTyping.typeBindings: time 0.001043/0.008548, allocations: 0.4908 MB / 301.3 MB, free: 7.258 MB / 266.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.001075/0.009623, allocations: 0.536 MB / 301.8 MB, free: 7 MB / 266.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002918/0.01254, allocations: 5.109 MB / 306.9 MB, free: 4.16 MB / 266.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.000132/0.01267, allocations: 71.27 kB / 307 MB, free: 4.094 MB / 266.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.00184/0.01451, allocations: 1.924 MB / 308.9 MB, free: 2.168 MB / 266.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001533/0.01604, allocations: 1.67 MB / 310.6 MB, free: 0.4961 MB / 266.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0004011/0.01645, allocations: 292 kB / 310.9 MB, free: 216 kB / 266.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002912/0.01674, allocations: 288 kB / 311.2 MB, free: 15.93 MB / 282.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0005953/0.01733, allocations: 0.996 MB / 312.1 MB, free: 14.93 MB / 282.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0007375/0.01807, allocations: 0.9318 MB / 313.1 MB, free: 14 MB / 282.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001912/0.01998, allocations: 2.634 MB / 315.7 MB, free: 11.36 MB / 282.7 MB
Notification: Performance of FrontEnd - DAE generated: time 2.575e-06/0.01998, allocations: 0 / 315.7 MB, free: 11.36 MB / 282.7 MB
Notification: Performance of FrontEnd: time 1.954e-06/0.01999, allocations: 3.984 kB / 315.7 MB, free: 11.35 MB / 282.7 MB
Notification: Performance of Transformations before backend: time 2.271e-05/0.02001, allocations: 0 / 315.7 MB, free: 11.35 MB / 282.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 164
 * Number of variables: 164
Notification: Performance of Generate backend data structure: time 0.00652/0.02653, allocations: 3.466 MB / 319.2 MB, free: 7.848 MB / 282.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.055e-05/0.02656, allocations: 15.98 kB / 319.2 MB, free: 7.832 MB / 282.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0004797/0.02704, allocations: 248.8 kB / 319.4 MB, free: 7.59 MB / 282.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0009564/0.028, allocations: 0.6624 MB / 320.1 MB, free: 6.895 MB / 282.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.000915/0.02891, allocations: 2.828 MB / 322.9 MB, free: 3.43 MB / 282.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003256/0.02924, allocations: 144.1 kB / 323.1 MB, free: 3.289 MB / 282.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001688/0.03092, allocations: 1.402 MB / 324.5 MB, free: 1.859 MB / 282.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.78e-05/0.03094, allocations: 0 / 324.5 MB, free: 1.859 MB / 282.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001917/0.03113, allocations: 28 kB / 324.5 MB, free: 1.832 MB / 282.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.29e-05/0.03115, allocations: 16 kB / 324.5 MB, free: 1.816 MB / 282.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0008693/0.03202, allocations: 0.5465 MB / 325.1 MB, free: 1.27 MB / 282.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.008234/0.04025, allocations: 3.798 MB / 328.9 MB, free: 13.45 MB / 298.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0008915/0.04114, allocations: 0.665 MB / 329.5 MB, free: 12.77 MB / 298.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0007656/0.04191, allocations: 0.5906 MB / 330.1 MB, free: 12.17 MB / 298.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0002124/0.04212, allocations: 29 kB / 330.1 MB, free: 12.14 MB / 298.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001218/0.04334, allocations: 1.255 MB / 331.4 MB, free: 10.86 MB / 298.7 MB
Notification: Performance of pre-optimization done (n=123): time 2.174e-06/0.04334, allocations: 0 / 331.4 MB, free: 10.86 MB / 298.7 MB
Notification: Performance of matching and sorting (n=123): time 0.002851/0.04619, allocations: 1.739 MB / 333.1 MB, free: 9.105 MB / 298.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.55e-05/0.04624, allocations: 94.11 kB / 333.2 MB, free: 8.996 MB / 298.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003126/0.04655, allocations: 0.5194 MB / 333.8 MB, free: 8.465 MB / 298.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0002612/0.04681, allocations: 65.64 kB / 333.8 MB, free: 8.395 MB / 298.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001788/0.04699, allocations: 240.6 kB / 334.1 MB, free: 8.152 MB / 298.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.000466/0.04745, allocations: 0.5617 MB / 334.6 MB, free: 7.586 MB / 298.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006596/0.04811, allocations: 327.4 kB / 334.9 MB, free: 7.262 MB / 298.7 MB
Notification: Performance of setup shared object (initialization): time 9.69e-05/0.04821, allocations: 361.8 kB / 335.3 MB, free: 6.902 MB / 298.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0008757/0.04909, allocations: 0.5629 MB / 335.8 MB, free: 6.332 MB / 298.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0009028/0.04999, allocations: 0.6919 MB / 336.5 MB, free: 5.621 MB / 298.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002623/0.05261, allocations: 1.976 MB / 338.5 MB, free: 3.621 MB / 298.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 6.172e-06/0.05262, allocations: 4 kB / 338.5 MB, free: 3.617 MB / 298.7 MB
Notification: Performance of matching and sorting (n=237) (initialization): time 0.002248/0.05487, allocations: 1.524 MB / 340 MB, free: 2.074 MB / 298.7 MB
Notification: Performance of prepare postOptimizeDAE: time 3.063e-05/0.0549, allocations: 29.7 kB / 340.1 MB, free: 2.039 MB / 298.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 9.438e-06/0.05491, allocations: 7.984 kB / 340.1 MB, free: 2.031 MB / 298.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 1.651e-05/0.05492, allocations: 8 kB / 340.1 MB, free: 2.023 MB / 298.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.02937/0.08429, allocations: 4.13 MB / 344.2 MB, free: 13.89 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.102e-05/0.08432, allocations: 8 kB / 344.2 MB, free: 13.88 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001901/0.08622, allocations: 246.9 kB / 344.5 MB, free: 13.64 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.0001795/0.0864, allocations: 40 kB / 344.5 MB, free: 13.6 MB / 314.7 MB
Warning: Assuming fixed start value for the following 1 variables:
         inertia.q_in.q:VARIABLE(flow=true start = advectionStream.SolutionFlow unit = \"m3/s\" fixed = true nominal = 1.6666666666666667e-8 )  \"Volume flow\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 6
 * Number of states: 0 ()
 * Number of discrete variables: 5 (pulse.count,$PRE.pulse.count,pulse.T_start,$PRE.pulse.T_start,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (236):
 * Single equations (assignments): 235
 * Array equations: 0
 * Algorithm blocks: 1
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0006528/0.08706, allocations: 198.3 kB / 344.7 MB, free: 13.39 MB / 314.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003868/0.08744, allocations: 99.86 kB / 344.8 MB, free: 13.3 MB / 314.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002055/0.0895, allocations: 1.601 MB / 346.4 MB, free: 11.68 MB / 314.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 8.186e-06/0.08951, allocations: 12 kB / 346.4 MB, free: 11.67 MB / 314.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.174e-06/0.08951, allocations: 0 / 346.4 MB, free: 11.67 MB / 314.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 7.704e-06/0.08952, allocations: 3.984 kB / 346.4 MB, free: 11.66 MB / 314.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.001979/0.09149, allocations: 1.38 MB / 347.8 MB, free: 10.26 MB / 314.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.146e-06/0.0915, allocations: 0 / 347.8 MB, free: 10.26 MB / 314.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0323/0.1238, allocations: 4.056 MB / 351.9 MB, free: 6.203 MB / 314.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 1.774e-05/0.1238, allocations: 8 kB / 351.9 MB, free: 6.195 MB / 314.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0004576/0.1243, allocations: 79.8 kB / 351.9 MB, free: 6.121 MB / 314.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 5.73e-06/0.1243, allocations: 4 kB / 351.9 MB, free: 6.117 MB / 314.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.746e-06/0.1243, allocations: 4 kB / 351.9 MB, free: 6.113 MB / 314.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.003242/0.1275, allocations: 2.198 MB / 354.1 MB, free: 3.895 MB / 314.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0005803/0.1281, allocations: 274.9 kB / 354.4 MB, free: 3.625 MB / 314.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0002977/0.1284, allocations: 71.89 kB / 354.5 MB, free: 3.555 MB / 314.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.001385/0.1298, allocations: 139.9 kB / 354.6 MB, free: 3.418 MB / 314.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0003193/0.1301, allocations: 132.7 kB / 354.7 MB, free: 3.285 MB / 314.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001399/0.1302, allocations: 23.98 kB / 354.8 MB, free: 3.262 MB / 314.7 MB
Notification: Performance of sorting global known variables: time 0.0001671/0.1304, allocations: 240.5 kB / 355 MB, free: 3.027 MB / 314.7 MB
Notification: Performance of sort global known variables: time 7.1e-08/0.1304, allocations: 0 / 355 MB, free: 3.027 MB / 314.7 MB
Notification: Performance of remove unused functions: time 0.0009968/0.1314, allocations: 0.6092 MB / 355.6 MB, free: 2.418 MB / 314.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 103 (substance.state,substance1.state,advectionStream.c[2],advectionStream.c[3],advectionStream.c[4],advectionStream.c[5],advectionStream.c[6],advectionStream.c[7],advectionStream.c[8],advectionStream.c[9],advectionStream.c[10],advectionStream.c[11],advectionStream.c[12],advectionStream.c[13],advectionStream.c[14],advectionStream.c[15],advectionStream.c[16],advectionStream.c[17],advectionStream.c[18],advectionStream.c[19],advectionStream.c[20],advectionStream.c[21],advectionStream.c[22],advectionStream.c[23],advectionStream.c[24],advectionStream.c[25],advectionStream.c[26],advectionStream.c[27],advectionStream.c[28],advectionStream.c[29],advectionStream.c[30],advectionStream.c[31],advectionStream.c[32],advectionStream.c[33],advectionStream.c[34],advectionStream.c[35],advectionStream.c[36],advectionStream.c[37],advectionStream.c[38],advectionStream.c[39],advectionStream.c[40],advectionStream.c[41],advectionStream.c[42],advectionStream.c[43],advectionStream.c[44],advectionStream.c[45],advectionStream.c[46],advectionStream.c[47],advectionStream.c[48],advectionStream.c[49],advectionStream.c[50],advectionStream.c[51],advectionStream.c[52],advectionStream.c[53],advectionStream.c[54],advectionStream.c[55],advectionStream.c[56],advectionStream.c[57],advectionStream.c[58],advectionStream.c[59],advectionStream.c[60],advectionStream.c[61],advectionStream.c[62],advectionStream.c[63],advectionStream.c[64],advectionStream.c[65],advectionStream.c[66],advectionStream.c[67],advectionStream.c[68],advectionStream.c[69],advectionStream.c[70],advectionStream.c[71],advectionStream.c[72],advectionStream.c[73],advectionStream.c[74],advectionStream.c[75],advectionStream.c[76],advectionStream.c[77],advectionStream.c[78],advectionStream.c[79],advectionStream.c[80],advectionStream.c[81],advectionStream.c[82],advectionStream.c[83],advectionStream.c[84],advectionStream.c[85],advectionStream.c[86],advectionStream.c[87],advectionStream.c[88],advectionStream.c[89],advectionStream.c[90],advectionStream.c[91],advectionStream.c[92],advectionStream.c[93],advectionStream.c[94],advectionStream.c[95],advectionStream.c[96],advectionStream.c[97],advectionStream.c[98],advectionStream.c[99],elasticVessel.volume,elasticVessel1.volume,inertia.q_in.q)
 * Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
 * Number of discrete states: 1 (pulse.count)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (123):
 * Single equations (assignments): 121
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.000352/0.1318, allocations: 177 kB / 355.8 MB, free: 2.227 MB / 314.7 MB
Notification: Performance of simCode: created initialization part: time 0.002096/0.1339, allocations: 1.461 MB / 357.2 MB, free: 0.75 MB / 314.7 MB
Notification: Performance of simCode: created event and clocks part: time 8.406e-06/0.1339, allocations: 4 kB / 357.3 MB, free: 0.7461 MB / 314.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0009991/0.1349, allocations: 0.7075 MB / 358 MB, free: 40 kB / 314.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.00115/0.136, allocations: 0.5687 MB / 358.5 MB, free: 15.49 MB / 330.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.004702/0.1407, allocations: 4.02 MB / 362.5 MB, free: 11.42 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.000158/0.1409, allocations: 267.1 kB / 362.8 MB, free: 11.14 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.001672/0.1425, allocations: 333.1 kB / 363.1 MB, free: 10.81 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.001964/0.1445, allocations: 495 kB / 363.6 MB, free: 10.32 MB / 330.7 MB
Notification: Performance of SimCode: time 8.62e-07/0.1445, allocations: 0 / 363.6 MB, free: 10.32 MB / 330.7 MB
Notification: Performance of Templates: time 0.04308/0.1876, allocations: 46.3 MB / 409.9 MB, free: 12.56 MB / 378.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.sim & ./Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.004525368101895]