Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr BioChem_BioChem.Examples.centralMetabolism.extra_cellular.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001352/0.001352, allocations: 80.94 kB / 19.94 MB, free: 4.543 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001403/0.001403, allocations: 177.4 kB / 23.36 MB, free: 1.129 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9555/0.9555, allocations: 177.2 MB / 203.8 MB, free: 5.469 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo): time 0.03812/0.03812, allocations: 9.553 MB / 269.8 MB, free: 3.82 MB / 250.7 MB
"
[Timeout remaining time 180]
Using package BioChem with version 1.1.3 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/BioChem 1.1.3/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(BioChem.Examples.centralMetabolism.extra_cellular,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.centralMetabolism.extra_cellular")
translateModel(BioChem.Examples.centralMetabolism.extra_cellular,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="BioChem_BioChem.Examples.centralMetabolism.extra_cellular") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.242e-06/1.242e-06, allocations: 0 / 289.2 MB, free: 412 kB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.024e-05/2.148e-05, allocations: 2.312 kB / 289.2 MB, free: 408 kB / 266.7 MB
Notification: Performance of NFInst.instantiate(BioChem.Examples.centralMetabolism.extra_cellular): time 0.1121/0.1121, allocations: 5.176 MB / 294.4 MB, free: 16.81 MB / 266.7 MB
Notification: Performance of NFInst.instExpressions: time 0.003046/0.1152, allocations: 1.328 MB / 295.7 MB, free: 15.96 MB / 266.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.0006679/0.1158, allocations: 53.56 kB / 295.8 MB, free: 15.96 MB / 266.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0005483/0.1164, allocations: 198.1 kB / 296 MB, free: 15.8 MB / 266.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.0006827/0.1171, allocations: 302.3 kB / 296.3 MB, free: 15.58 MB / 266.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.0006757/0.1178, allocations: 356.5 kB / 296.6 MB, free: 15.35 MB / 266.7 MB
Notification: Performance of NFFlatten.flatten: time 0.001289/0.119, allocations: 1.419 MB / 298 MB, free: 14.58 MB / 266.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0006209/0.1197, allocations: 445.5 kB / 298.5 MB, free: 14.32 MB / 266.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001021/0.1207, allocations: 0.8749 MB / 299.4 MB, free: 13.87 MB / 266.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.00076/0.1214, allocations: 0.4977 MB / 299.9 MB, free: 13.68 MB / 266.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0003537/0.1218, allocations: 191.7 kB / 300 MB, free: 13.68 MB / 266.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0002309/0.122, allocations: 191.1 kB / 300.2 MB, free: 13.68 MB / 266.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0002144/0.1222, allocations: 358.7 kB / 300.6 MB, free: 13.42 MB / 266.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0005703/0.1228, allocations: 0.4894 MB / 301.1 MB, free: 13.16 MB / 266.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.00104/0.1239, allocations: 1.045 MB / 302.1 MB, free: 12.56 MB / 266.7 MB
Notification: Performance of FrontEnd - DAE generated: time 5.27e-06/0.1239, allocations: 1.156 kB / 302.1 MB, free: 12.56 MB / 266.7 MB
Notification: Performance of FrontEnd: time 1.603e-06/0.1239, allocations: 0 / 302.1 MB, free: 12.56 MB / 266.7 MB
Notification: Performance of Transformations before backend: time 3.414e-05/0.1239, allocations: 0 / 302.1 MB, free: 12.56 MB / 266.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 353
 * Number of variables: 353
Notification: Performance of Generate backend data structure: time 0.001745/0.1256, allocations: 1.472 MB / 303.6 MB, free: 11.56 MB / 266.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.508e-05/0.1257, allocations: 9.625 kB / 303.6 MB, free: 11.56 MB / 266.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0002135/0.1259, allocations: 207 kB / 303.8 MB, free: 11.47 MB / 266.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003884/0.1263, allocations: 308.4 kB / 304.1 MB, free: 11.23 MB / 266.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 6.767e-05/0.1263, allocations: 103.1 kB / 304.2 MB, free: 11.18 MB / 266.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.000172/0.1265, allocations: 146.9 kB / 304.3 MB, free: 11.12 MB / 266.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001079/0.1276, allocations: 0.9212 MB / 305.3 MB, free: 10.58 MB / 266.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.144e-05/0.1276, allocations: 6.797 kB / 305.3 MB, free: 10.58 MB / 266.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 7.082e-05/0.1277, allocations: 57.22 kB / 305.3 MB, free: 10.54 MB / 266.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.66e-05/0.1277, allocations: 33.47 kB / 305.4 MB, free: 10.54 MB / 266.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0005645/0.1283, allocations: 372.2 kB / 305.7 MB, free: 10.46 MB / 266.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.003397/0.1317, allocations: 2.977 MB / 308.7 MB, free: 8.199 MB / 266.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0005153/0.1322, allocations: 0.6436 MB / 309.3 MB, free: 7.555 MB / 266.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0001727/0.1324, allocations: 215.4 kB / 309.6 MB, free: 7.34 MB / 266.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 3.234e-05/0.1324, allocations: 22.09 kB / 309.6 MB, free: 7.32 MB / 266.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.093e-05/0.1324, allocations: 43.55 kB / 309.6 MB, free: 7.27 MB / 266.7 MB
Notification: Performance of pre-optimization done (n=96): time 3.486e-06/0.1324, allocations: 0 / 309.6 MB, free: 7.27 MB / 266.7 MB
Notification: Performance of matching and sorting (n=114): time 0.003598/0.136, allocations: 2.824 MB / 312.4 MB, free: 4.488 MB / 266.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 2.368e-05/0.1361, allocations: 64.41 kB / 312.5 MB, free: 4.414 MB / 266.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.000177/0.1362, allocations: 367.9 kB / 312.9 MB, free: 4.043 MB / 266.7 MB
Notification: Performance of collectPreVariables (initialization): time 4.055e-05/0.1363, allocations: 45.7 kB / 312.9 MB, free: 3.992 MB / 266.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0001358/0.1364, allocations: 0.5019 MB / 313.4 MB, free: 3.484 MB / 266.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0001612/0.1366, allocations: 432.2 kB / 313.8 MB, free: 3.059 MB / 266.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0001626/0.1367, allocations: 203.4 kB / 314 MB, free: 2.852 MB / 266.7 MB
Notification: Performance of setup shared object (initialization): time 5.392e-05/0.1368, allocations: 386.6 kB / 314.4 MB, free: 2.465 MB / 266.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0001424/0.1369, allocations: 146.3 kB / 314.5 MB, free: 2.328 MB / 266.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0002144/0.1371, allocations: 435.9 kB / 315 MB, free: 1.793 MB / 266.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.0006535/0.1378, allocations: 0.9337 MB / 315.9 MB, free: 0.7656 MB / 266.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 4.509e-06/0.1378, allocations: 3.656 kB / 315.9 MB, free: 0.7656 MB / 266.7 MB
Notification: Performance of matching and sorting (n=165) (initialization): time 0.0007052/0.1385, allocations: 0.764 MB / 316.7 MB, free: 15.98 MB / 282.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.913e-05/0.1385, allocations: 8 kB / 316.7 MB, free: 15.98 MB / 282.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.308e-05/0.1385, allocations: 8 kB / 316.7 MB, free: 15.97 MB / 282.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.0002821/0.1388, allocations: 130.5 kB / 316.8 MB, free: 15.84 MB / 282.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0006349/0.1395, allocations: 299.4 kB / 317.1 MB, free: 15.55 MB / 282.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.001606/0.1411, allocations: 2.833 MB / 319.9 MB, free: 12.54 MB / 282.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0003516/0.1414, allocations: 35.98 kB / 320 MB, free: 12.5 MB / 282.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 4.124e-05/0.1415, allocations: 40 kB / 320 MB, free: 12.46 MB / 282.7 MB
Warning: Assuming fixed start value for the following 15 variables:
         V:VARIABLE(start = 2.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         cytosol.V:VARIABLE(start = 2.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         cytosol.GLY.c:VARIABLE(min = 0.0 start = 1.0 unit = \"mol/l\" fixed = true stateSelect=StateSelect.prefer )  \"Current concentration of substance (mM)\" type: Real
         cytosol.mitochondria.V:VARIABLE(start = 2.0 fixed = true stateSelect=StateSelect.prefer )  \"Compartment volume\" type: Real
         LACext.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.mitochondria.NADm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.mitochondria.NADHm.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.CP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.LAC.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.AMP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.IMP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.ADP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.PYR.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.FDP.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
         cytosol.NADH.n:VARIABLE(min = 0.0 unit = \"mol\" fixed = true stateSelect=StateSelect.prefer )  \"Number of moles of substance in pool (mol)\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 35
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (157):
 * Single equations (assignments): 155
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,4,100.0%), (1,4,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of prepare postOptimizeDAE: time 0.0003667/0.1418, allocations: 248.1 kB / 320.3 MB, free: 12.23 MB / 282.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001006/0.1419, allocations: 87.88 kB / 320.3 MB, free: 12.14 MB / 282.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.0001101/0.142, allocations: 126.9 kB / 320.5 MB, free: 12.02 MB / 282.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 8.136e-06/0.142, allocations: 12 kB / 320.5 MB, free: 12.01 MB / 282.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.161e-05/0.1421, allocations: 0 / 320.5 MB, free: 12.01 MB / 282.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 8.506e-06/0.1421, allocations: 7.984 kB / 320.5 MB, free: 12 MB / 282.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.00169/0.1438, allocations: 1.275 MB / 321.8 MB, free: 10.7 MB / 282.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.346e-06/0.1438, allocations: 0 / 321.8 MB, free: 10.7 MB / 282.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0005533/0.1443, allocations: 215.7 kB / 322 MB, free: 10.48 MB / 282.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.0002517/0.1446, allocations: 124.8 kB / 322.1 MB, free: 10.36 MB / 282.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.804e-05/0.1446, allocations: 31.98 kB / 322.1 MB, free: 10.33 MB / 282.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.001396/0.146, allocations: 2.835 MB / 325 MB, free: 7.32 MB / 282.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.573e-06/0.146, allocations: 0 / 325 MB, free: 7.32 MB / 282.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.0009664/0.147, allocations: 0.9724 MB / 325.9 MB, free: 6.328 MB / 282.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 7.548e-05/0.1471, allocations: 51.58 kB / 326 MB, free: 6.277 MB / 282.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 6.165e-05/0.1471, allocations: 28 kB / 326 MB, free: 6.25 MB / 282.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002161/0.1473, allocations: 31.81 kB / 326 MB, free: 6.223 MB / 282.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 8.052e-05/0.1474, allocations: 68.84 kB / 326.1 MB, free: 6.156 MB / 282.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.022e-05/0.1474, allocations: 23.98 kB / 326.1 MB, free: 6.133 MB / 282.7 MB
Notification: Performance of sorting global known variables: time 9.514e-05/0.1475, allocations: 136.7 kB / 326.3 MB, free: 5.996 MB / 282.7 MB
Notification: Performance of sort global known variables: time 7e-08/0.1475, allocations: 0 / 326.3 MB, free: 5.996 MB / 282.7 MB
Notification: Performance of remove unused functions: time 0.0006707/0.1482, allocations: 272 kB / 326.5 MB, free: 5.73 MB / 282.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 17 (V,cytosol.V,cytosol.NADH.n,cytosol.FDP.n,cytosol.PYR.n,cytosol.ADP.n,cytosol.IMP.n,cytosol.AMP.n,cytosol.LAC.n,cytosol.CP.n,cytosol.GLY.c,cytosol.G6P.c,cytosol.mitochondria.V,cytosol.mitochondria.NADHm.n,cytosol.mitochondria.NADm.n,cytosol.DHAP.c,LACext.n)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (106):
 * Single equations (assignments): 104
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 2
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 2 systems
   {(1,4,100.0%), (1,4,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 0 systems
Notification: Performance of Backend phase and start with SimCode phase: time 0.0001425/0.1484, allocations: 117.1 kB / 326.6 MB, free: 5.605 MB / 282.7 MB
Notification: Performance of simCode: created initialization part: time 0.0008607/0.1492, allocations: 0.8642 MB / 327.5 MB, free: 4.715 MB / 282.7 MB
Notification: Performance of simCode: created event and clocks part: time 1.318e-05/0.1492, allocations: 8.5 kB / 327.5 MB, free: 4.707 MB / 282.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0005127/0.1497, allocations: 0.5918 MB / 328.1 MB, free: 4.09 MB / 282.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0003705/0.1501, allocations: 118.9 kB / 328.2 MB, free: 3.98 MB / 282.7 MB
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002508/0.1526, allocations: 2.055 MB / 330.3 MB, free: 1.891 MB / 282.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001443/0.1528, allocations: 212.5 kB / 330.5 MB, free: 1.664 MB / 282.7 MB
Notification: Performance of simCode: alias equations: time 0.0002975/0.1531, allocations: 91.34 kB / 330.6 MB, free: 1.574 MB / 282.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0003367/0.1534, allocations: 201.2 kB / 330.8 MB, free: 1.379 MB / 282.7 MB
Notification: Performance of SimCode: time 9.42e-07/0.1534, allocations: 0 / 330.8 MB, free: 1.379 MB / 282.7 MB
Notification: Performance of Templates: time 0.01528/0.1687, allocations: 11.64 MB / 342.4 MB, free: 5.926 MB / 298.7 MB
"
[Timeout remaining time 660]
make -j1 -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular.makefile [Timeout 660]
(rm -f BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe ; mkfifo BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe ; head -c 1048576 < BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe >> ../files/BioChem_BioChem.Examples.centralMetabolism.extra_cellular.sim & ./BioChem_BioChem.Examples.centralMetabolism.extra_cellular -abortSlowSimulation -alarm=240  -lv LOG_STATS > BioChem_BioChem.Examples.centralMetabolism.extra_cellular.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 3.055111958179623]