Pharmacolibrary test using OpenModelica

Total Frontend Backend SimCode Templates Compilation Simulation Verification
90 71 71 71 71 71 71 0

Test started: 2026-10-06 16:28:37
Total time taken: 0:04:53
System info: r7945-1: AMD Ryzen 9 PRO 7945 12-Core Processor, 63 GB RAM, Ubuntu 26.04.1 LTS

OpenModelica Version: v1.28.0-dev.1296+g827ca45b7b.rust
OpenModelicaLibraryTesting Changes

CommitDateAuthorSummary
626032b2026-10-06 15:05:47 +0200Martin SjölundStop createTables from hanging on table locks (#369)

Tested Library: Pharmacolibrary 25.09

{
 "path": "Pharmacolibrary",
 "sha": "de5fc7280ddaefacbac29ec6e89daea657dd2bbc",
 "support": "fullSupport",
 "uses": {
  "Modelica": "4.0.0"
 },
 "version": "25.9.0",
 "zipfile": "https://github.com/creative-connections/Pharmacolibrary/archive/de5fc7280ddaefacbac29ec6e89daea657dd2bbc.zip"
}

BuildModel time limit: 660s
Simulation time limit: 240s
Default tolerance: 1e-06
Default number of intervals: 2500
Optimization level: Tool default

Flags:
setCommandLineOptions("--simCodeTarget=wasm-jit")
setCommandLineOptions("-d=nogen");
setCommandLineOptions("-d=initialization");
setCommandLineOptions("-d=backenddaeinfo");
setCommandLineOptions("-d=discreteinfo");
setCommandLineOptions("-d=stateselection");
setCommandLineOptions("-d=execstat");
setMatchingAlgorithm("PFPlusExt");
setIndexReductionMethod("dynamicStateSelection");
Config:
{
 "library": "Pharmacolibrary"
}

Links are provided if getErrorString() or the simulation generates output. The links are coded with red if there were errors, yellow if there were warnings, and normal links if there are only notifications.

ModelVerifiedSimulateTotal buildModelParsingFrontendBackendSimCodeTemplatesCompileTotal Execution
Pharmacolibrary.DevModels.PKOneCompartmentModelPeriodic (sim) 0.120.041.310.010.010.000.000.022.02
Pharmacolibrary.DevModels.PKTwoCompartmentModel (sim) 0.010.041.330.010.010.000.000.031.92
Pharmacolibrary.DevModels.PKTwoCompartmentModelComparison (sim) 0.030.061.310.010.010.010.000.032.02
Pharmacolibrary.DevModels.PKTwoCompartmentModelOral (sim) 0.010.051.240.010.010.000.000.031.96
Pharmacolibrary.DevModels.PKWholeBodyModel 0.000.021.280.020.000.000.000.001.89
Pharmacolibrary.DevModels.Palivizumab.PKTwoCompartmentPalivizumab (sim) 0.030.071.300.010.010.010.000.041.99
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics1 (sim) 0.000.021.370.000.000.000.000.012.03
Pharmacolibrary.DevModels.Palivizumab.ViralInfectionDynamics2 (sim) 0.010.081.320.040.010.000.000.021.96
Pharmacolibrary.DevModels.Paracetamol.AcetaminophenEquations (sim) 0.000.031.350.000.000.000.000.011.93
Pharmacolibrary.DevModels.Paracetamol.ParacetamolComponents 0.000.021.320.020.000.000.000.001.89
Pharmacolibrary.DevModels.Paracetamol.ParacetamolEquations2 (sim) 0.010.021.410.000.000.000.000.012.04
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPK 0.000.021.250.020.000.000.000.001.83
Pharmacolibrary.DevModels.Remdesivir.ComponentRemdesivirPKPD 0.000.041.220.040.000.000.000.001.84
Pharmacolibrary.DevModels.Remdesivir.Eq10RemdesivirPK (sim) 0.050.031.250.000.010.000.000.022.00
Pharmacolibrary.DevModels.SingleCompartment.GentamicinePK 0.000.021.260.020.000.000.000.001.89
Pharmacolibrary.DevModels.SingleCompartment.LithiumPK 0.000.021.260.020.000.000.000.001.90
Pharmacolibrary.DevModels.SingleCompartment.PBPKModel 0.000.021.320.020.000.000.000.001.92
Pharmacolibrary.DevModels.SingleCompartment.ParacetamolPK 0.000.021.330.020.000.000.000.002.01
Pharmacolibrary.DevModels.SingleCompartment.RemdesivirPK 0.000.021.230.020.000.000.000.001.87
Pharmacolibrary.DevModels.SingleCompartment.TheopyllinePK 0.000.021.240.020.000.000.000.001.93
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheral 0.000.031.290.030.000.000.000.001.87
Pharmacolibrary.DevModels.SingleDoseArteryTissuePeripheralElimination 0.000.021.320.020.000.000.000.001.86
Pharmacolibrary.DevModels.SingleDoseArteryTissueVenous 0.000.041.260.040.000.000.000.001.90
Pharmacolibrary.DevModels.SingleDoseDiffusion (sim) 0.420.071.350.010.010.010.010.032.47
Pharmacolibrary.DevModels.SingleDoseIAFloxuridine 0.000.021.390.020.000.000.000.002.06
Pharmacolibrary.DevModels.SingleDoseIVAmiodarone 0.000.021.230.020.000.000.000.001.84
Pharmacolibrary.DevModels.SingleDoseIVAmiodaroneEquations 0.000.021.240.020.000.000.000.001.82
Pharmacolibrary.DevModels.SingleDoseIntravenousWholeBody (sim) 2.270.111.280.020.030.010.010.064.34
Pharmacolibrary.DevModels.SingleDoseLumen (sim) 0.410.061.300.010.010.010.000.032.49
Pharmacolibrary.DevModels.SingleDoseVeinsGutSpleenPortalVeinLiver (sim) 0.560.061.300.010.010.000.000.032.50
Pharmacolibrary.DevModels.Systems.PKOneCompartmentEquations (sim) 0.110.031.290.000.000.000.000.012.09
Pharmacolibrary.Drugs.B_BloodAndBloodFormingOrgans.B01A_AntithromboticAgents.B01AB05_Enoxaparin.Enoxaparin (sim) 0.130.051.280.010.010.000.000.022.03
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_1 (sim) 0.140.071.330.010.020.000.010.032.17
Pharmacolibrary.Drugs.C_CardiovascularSystem.C01A_CardiacGlycosides.C01AA05_Digoxin.Digoxin_IV (sim) 0.140.051.260.010.010.000.000.032.03
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J05A_DirectActingAntivirals.J05AB16_Remdesivir.Remdesivir_2C_metabolites (sim) 1.850.081.370.010.010.010.000.053.90
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD01_Palivizumab.Palivizumab_IM (sim) 0.250.051.300.010.010.000.000.032.22
Pharmacolibrary.Drugs.J_AntiinfectivesForSystemicUse.J06B_Immunoglobulins.J06BD08_Nirsevimab.Nirsevimab_IM (sim) 0.620.061.300.010.010.000.000.032.57
Pharmacolibrary.Drugs.L_AntineoplasticAndImmunomodulatingAgents.L01B_Antimetabolites.L01BC02_Fluorouracil.Fluorouracil_1C (sim) 0.120.041.290.010.010.000.000.022.13
Pharmacolibrary.Drugs.M_MusculoSkeletalSystem.M01A_AntiinflammatoryAndAntirheumaticProductsNonStero.M01AE01_Ibuprofen.Ibuprofen (sim) 0.130.061.260.010.010.010.000.032.03
Pharmacolibrary.Drugs.N_NervousSystem.N02A_Opioids.N02AB03_Fentanyl.Fentanyl_3C (sim) 0.150.051.320.010.010.000.000.032.08
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Comparison_healthy_SMA 0.000.201.190.200.000.000.000.001.97
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_SMA (sim) 0.140.041.240.010.010.000.000.022.02
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy 0.000.231.230.230.000.000.000.001.99
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_healthy_oral (sim) 0.150.051.240.010.010.000.000.032.03
Pharmacolibrary.Drugs.N_NervousSystem.N02B_OtherAnalgesicsAndAntipyretics.N02BE01_Paracetamol.Paracetamol_metabolites (sim) 0.050.071.280.010.010.010.000.041.99
Pharmacolibrary.Drugs.N_NervousSystem.N05A_Antipsychotics.N05AN01_Lithium.Lithium (sim) 0.140.051.330.010.010.000.000.032.08
Pharmacolibrary.Drugs.N_NervousSystem.N05C_HypnoticsAndSedatives.N05CD08_Midazolam.Midazolam_2C (sim) 0.120.051.340.010.010.000.000.022.07
Pharmacolibrary.Drugs.N_NervousSystem.N06B_PsychostimulantsAgentsUsedForAdhdAndNootropics.N06BC01_Caffeine.Caffeine (sim) 0.210.051.320.010.010.000.000.022.15
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.DZIF10c.DZIF10c_1C (sim) 0.030.071.250.010.010.000.010.041.93
Pharmacolibrary.Drugs.Z_Unclassified.J06B_ProbableImmunoglobulins.MHAA459A.MHAA459A_2C (sim) 0.280.061.290.010.010.010.000.032.23
Pharmacolibrary.Examples.PBPK_OralDoseGUTWholeBody (sim) 0.020.131.190.020.030.010.010.072.12
Pharmacolibrary.Examples.PBPK_SingleDoseVenousArteryTissue (sim) 0.010.041.200.010.010.000.000.021.95
Pharmacolibrary.Examples.PKOneCompartmentModel (sim) 0.140.0510.610.010.010.000.000.0211.49
Pharmacolibrary.Examples.PKOneCompartmentModelPeriodic (sim) 0.120.0510.390.010.010.000.000.0311.27
Pharmacolibrary.Examples.PKOneCompartmentSimplestModel (sim) 0.000.0410.880.000.010.000.000.0211.53
Pharmacolibrary.Examples.PKPD_Midazolam (sim) 0.080.071.220.010.010.010.010.042.03
Pharmacolibrary.Examples.PKPD_integration.PKPD_HemodynamicsMeurs_flatNorm (sim) 0.090.791.230.260.100.050.030.352.83
Pharmacolibrary.Examples.PKPG_1C_Gentamicin (sim) 0.300.061.210.010.010.000.000.032.29
Pharmacolibrary.Examples.PKPG_1C_GentamicineEquation (sim) 0.000.041.240.000.000.000.000.031.93
Pharmacolibrary.Examples.PKThreeCompartmentModel (sim) 0.010.059.440.010.010.000.000.0310.10
Pharmacolibrary.Examples.PKTwoCompartmentModel (sim) 0.010.059.950.010.010.000.000.0310.56
Pharmacolibrary.Examples.PK_1C_Digoxin (sim) 0.130.041.210.010.010.000.000.022.08
Pharmacolibrary.Examples.PK_1C_Gentamicin (sim) 0.140.0410.530.010.010.000.000.0311.47
Pharmacolibrary.Examples.PK_1C_GentamicinEquations (sim) 0.000.0310.630.000.000.000.000.0111.30
Pharmacolibrary.Examples.PK_1C_GentamicinEquations2 (sim) 0.000.021.290.000.000.000.000.011.96
Pharmacolibrary.Examples.PK_1C_GentamicineSimple (sim) 0.000.0410.660.000.010.000.000.0211.35
Pharmacolibrary.Examples.PK_1C_Lithium2 (sim) 0.130.051.210.010.010.000.000.032.02
Pharmacolibrary.Examples.PK_1C_LithiumCarbonate (sim) 1.300.049.990.010.010.000.000.0311.91
Pharmacolibrary.Examples.PK_2C_IVMidazolam (sim) 0.070.089.530.010.010.000.010.0510.38
Pharmacolibrary.Examples.PK_3C_FentanylIV (sim) 0.010.059.230.010.010.000.000.039.87
Pharmacolibrary.Examples.PK_Caffeine.PK_population_Caffeine (sim) 0.000.091.240.010.020.010.010.052.04
Pharmacolibrary.Examples.PK_Lithium.PGx_experiment (sim) 0.000.181.270.030.030.010.010.102.03
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium (sim) 0.170.081.210.010.010.020.000.032.07
Pharmacolibrary.Examples.PK_Lithium.PK_1C_Lithium_CI (sim) 0.230.101.320.010.020.010.010.052.21
Pharmacolibrary.Examples.Paracetamol_Experiment (sim) 0.020.091.310.010.020.010.010.052.07
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_2C_generic (sim) 1.230.231.300.030.040.010.010.133.39
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Gentamicin_Experiment (sim) 0.020.121.230.020.020.010.010.062.10
Pharmacolibrary.Examples.Pharmacogenomics.PKPG_Lithium_Experiment (sim) 0.850.131.230.020.020.010.010.072.89
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_generic (sim) 0.070.201.270.020.040.010.010.122.27
Pharmacolibrary.Examples.Pharmacogenomics.PK_2C_single (sim) 0.010.061.250.010.010.010.000.031.98
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Gentamicin (sim) 0.330.061.250.010.010.010.000.032.34
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_1C_Lithium (sim) 2.910.051.230.010.010.010.000.034.92
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PKPG_2C_Ibuprofen (sim) 0.280.061.310.010.010.000.000.032.19
Pharmacolibrary.Examples.Pharmacogenomics.Patient_PK_2C_Ibuprofen (sim) 0.150.061.320.010.010.010.000.032.16
Pharmacolibrary.Pharmacogenomics.PGx.GenotypePhenotypeComponent 0.000.021.240.020.000.000.000.001.84
Pharmacolibrary.Pharmacokinetic.Models.PBPK_whole_body (sim) 0.000.221.340.030.050.010.010.122.15
Pharmacolibrary.Pharmacokinetic.Models.PK_1C (sim) 0.150.051.260.010.010.000.000.022.11
Pharmacolibrary.Pharmacokinetic.Models.PK_2C (sim) 0.140.051.290.010.010.000.000.032.12
Pharmacolibrary.Pharmacokinetic.Models.PK_2C_enteral (sim) 0.160.051.270.010.010.000.000.032.13
Pharmacolibrary.Pharmacokinetic.Models.PK_3C_enteral (sim) 0.140.071.280.010.010.010.000.042.09