Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.SimpleReaction.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "[:1:22-1:33:writable] Warning: Modelica only supports 32-bit signed integers! Transforming: 13743895347 into a real Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0003493/0.0003493, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0002724/0.0002724, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.2078/0.2078, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.004423/0.004423, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 180] Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: simulate(Bodylight.Chemical.Examples.SimpleReaction,startTime=0,stopTime=1e-07,tolerance=1e-06,numberOfIntervals=2500,outputFormat="empty",variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.SimpleReaction",simflags="-abortSlowSimulation -alarm=240 -lv LOG_STATS") simulate(Bodylight.Chemical.Examples.SimpleReaction,startTime=0,stopTime=1e-07,tolerance=1e-06,numberOfIntervals=2500,outputFormat="empty",variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.SimpleReaction",simflags="-abortSlowSimulation -alarm=240 -lv LOG_STATS") [Timeout 900] "Notification: Performance of FrontEnd - loaded program: time 6.41e-07/6.41e-07, allocations: 0 / 0, free: 0 / 0 Notification: Performance of FrontEnd - Absyn->SCode: time 1.487e-05/1.551e-05, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.SimpleReaction): time 0.001908/0.001924, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFInst.instExpressions: time 0.002537/0.004461, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFInst.updateImplicitVariability: time 8.594e-05/0.004547, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFTyping.typeComponents: time 9.699e-05/0.004644, allocations: 0 / 0, free: 0 / 0 [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.A.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.A.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.SimpleReaction.A.Utilities.UnitConversions.findUnit'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.B.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.B.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.SimpleReaction.B.Utilities.UnitConversions.findUnit'. Notification: Performance of NFTyping.typeBindings: time 0.0005956/0.005239, allocations: 0 / 0, free: 0 / 0 [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.A.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.A.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.B.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. [/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.SimpleReaction.B.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'. Notification: Performance of NFTyping.typeClassSections: time 0.000433/0.005672, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFFlatten.flatten: time 0.0001484/0.005821, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFFlatten.resolveConnections: time 5.272e-05/0.005873, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFEvalConstants.evaluate: time 9.684e-05/0.00597, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFSimplifyModel.simplify: time 9.854e-05/0.006069, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFPackage.collectConstants: time 1.591e-05/0.006085, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFFlatten.collectFunctions: time 2.366e-05/0.006108, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFScalarize.scalarize: time 3.35e-05/0.006142, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFVerifyModel.verify: time 3.802e-05/0.00618, allocations: 0 / 0, free: 0 / 0 Notification: Performance of NFConvertDAE.convert: time 0.0001333/0.006313, allocations: 0 / 0, free: 0 / 0 Notification: Performance of FrontEnd - DAE generated: time 1.315e-05/0.006326, allocations: 0 / 0, free: 0 / 0 Notification: Performance of FrontEnd: time 4.9e-07/0.006327, allocations: 0 / 0, free: 0 / 0 Notification: Performance of Transformations before backend: time 8.425e-06/0.006335, allocations: 0 / 0, free: 0 / 0 Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 25 * Number of variables: 25 Notification: Performance of Generate backend data structure: time 0.0004448/0.00678, allocations: 0 / 0, free: 0 / 0 Notification: Performance of prepare preOptimizeDAE: time 4.522e-05/0.006825, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt normalInlineFunction (simulation): time 9.791e-05/0.006923, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt evaluateParameters (simulation): time 0.000194/0.007117, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt simplifyIfEquations (simulation): time 1.565e-05/0.007133, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt expandDerOperator (simulation): time 2.348e-05/0.007156, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt clockPartitioning (simulation): time 0.0001456/0.007302, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt findStateOrder (simulation): time 8.756e-06/0.007311, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt replaceEdgeChange (simulation): time 2.004e-05/0.007331, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.854e-06/0.007332, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt removeEqualRHS (simulation): time 5.435e-05/0.007387, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0003536/0.00774, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt comSubExp (simulation): time 9.362e-05/0.007834, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt resolveLoops (simulation): time 2.043e-05/0.007854, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt evalFunc (simulation): time 3.557e-06/0.007858, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 1.405e-05/0.007872, allocations: 0 / 0, free: 0 / 0 Notification: Performance of pre-optimization done (n=10): time 1.924e-06/0.007874, allocations: 0 / 0, free: 0 / 0 Notification: Performance of matching and sorting (n=10): time 0.0001206/0.007995, allocations: 0 / 0, free: 0 / 0 Notification: Performance of inlineWhenForInitialization (initialization): time 1.761e-05/0.008012, allocations: 0 / 0, free: 0 / 0 Notification: Performance of selectInitializationVariablesDAE (initialization): time 8.313e-05/0.008095, allocations: 0 / 0, free: 0 / 0 Notification: Performance of collectPreVariables (initialization): time 2.046e-05/0.008116, allocations: 0 / 0, free: 0 / 0 Notification: Performance of collectInitialEqns (initialization): time 2.915e-05/0.008145, allocations: 0 / 0, free: 0 / 0 Notification: Performance of collectInitialBindings (initialization): time 1.86e-05/0.008164, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simplifyInitialFunctions (initialization): time 3.451e-05/0.008198, allocations: 0 / 0, free: 0 / 0 Notification: Performance of setup shared object (initialization): time 1.752e-05/0.008216, allocations: 0 / 0, free: 0 / 0 Notification: Performance of preBalanceInitialSystem (initialization): time 1.851e-05/0.008234, allocations: 0 / 0, free: 0 / 0 Notification: Performance of partitionIndependentBlocks (initialization): time 2.782e-05/0.008262, allocations: 0 / 0, free: 0 / 0 Notification: Performance of analyzeInitialSystem (initialization): time 5.416e-05/0.008316, allocations: 0 / 0, free: 0 / 0 Notification: Performance of solveInitialSystemEqSystem (initialization): time 1.823e-06/0.008318, allocations: 0 / 0, free: 0 / 0 Notification: Performance of matching and sorting (n=20) (initialization): time 8.545e-05/0.008403, allocations: 0 / 0, free: 0 / 0 Notification: Performance of prepare postOptimizeDAE: time 7.774e-06/0.008411, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyComplexFunction (initialization): time 2.745e-06/0.008414, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt tearingSystem (initialization): time 1.292e-05/0.008427, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt solveSimpleEquations (initialization): time 7.502e-05/0.008502, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 6.512e-06/0.008508, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyAllExpressions (initialization): time 4.698e-05/0.008555, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt collapseArrayExpressions (initialization): time 8.767e-06/0.008564, allocations: 0 / 0, free: 0 / 0 Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 6 * Number of states: 0 () * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (20): * Single equations (assignments): 20 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 4.787e-05/0.008612, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt lateInlineFunction (simulation): time 2.095e-05/0.008633, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt wrapFunctionCalls (simulation): time 3.976e-05/0.008673, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.533e-06/0.008674, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt constantLinearSystem (simulation): time 4.618e-06/0.008679, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifysemiLinear (simulation): time 2.044e-06/0.008681, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.000163/0.008844, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyComplexFunction (simulation): time 1.162e-06/0.008845, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt solveSimpleEquations (simulation): time 4.409e-05/0.008889, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt tearingSystem (simulation): time 1.563e-06/0.008891, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt inputDerivativesUsed (simulation): time 1.872e-05/0.008909, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 1.403e-06/0.008911, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 9.32e-07/0.008912, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt symbolicJacobian (simulation): time 0.000108/0.00902, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt removeConstants (simulation): time 3.937e-05/0.009059, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 5e-05/0.009109, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt simplifyAllExpressions (simulation): time 4.877e-05/0.009158, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt findZeroCrossings (simulation): time 2.121e-05/0.009179, allocations: 0 / 0, free: 0 / 0 Notification: Performance of postOpt collapseArrayExpressions (simulation): time 4.268e-06/0.009183, allocations: 0 / 0, free: 0 / 0 Notification: Performance of sorting global known variables: time 4.616e-05/0.009229, allocations: 0 / 0, free: 0 / 0 Notification: Performance of sort global known variables: time 3.867e-06/0.009233, allocations: 0 / 0, free: 0 / 0 Notification: Performance of remove unused functions: time 0.0001592/0.009393, allocations: 0 / 0, free: 0 / 0 Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 1 * Number of states: 2 (A.state,B.state) * Number of discrete variables: 0 () * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (10): * Single equations (assignments): 10 * Array equations: 0 * Algorithm blocks: 0 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 6.617e-05/0.009459, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created initialization part: time 9.502e-05/0.009554, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created event and clocks part: time 1.312e-06/0.009555, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created simulation system equations: time 1.898e-05/0.009574, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0002922/0.009866, allocations: 0 / 0, free: 0 / 0 Error: Error parsing unit kcal: Unit not found Error: Error parsing unit kcal/min: Unit not found Error: Error parsing unit kcal/mol: Unit not found Error: Error parsing unit %: Parse error Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.0005695/0.01044, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: some other stuff during SimCode phase: time 2.871e-05/0.01046, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: alias equations: time 3.838e-05/0.0105, allocations: 0 / 0, free: 0 / 0 Notification: Performance of simCode: all other stuff during SimCode phase: time 9.003e-05/0.01059, allocations: 0 / 0, free: 0 / 0 Notification: Performance of SimCode: time 1.151e-05/0.0106, allocations: 0 / 0, free: 0 / 0 Error: Error parsing unit kcal: Unit not found Error: Error parsing unit kcal/min: Unit not found Error: Error parsing unit kcal/mol: Unit not found Error: Error parsing unit %: Parse error Notification: Performance of Templates: time 0.0009293/0.01153, allocations: 0 / 0, free: 0 / 0 " [Timeout remaining time 900] [Calling sys.exit(0), Time elapsed: 0.6985666174441576]