Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo): time 0.05296/0.05296, allocations: 11.15 MB / 30.94 MB, free: 4.816 MB / 24.77 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001015/0.001015, allocations: 94.06 kB / 38.65 MB, free: 6.918 MB / 33.03 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001003/0.001003, allocations: 160.6 kB / 46.45 MB, free: 10.2 MB / 44.04 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9199/0.9199, allocations: 177.2 MB / 231.3 MB, free: 4.668 MB / 202.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.08947/0.08947, allocations: 17.63 MB / 309.9 MB, free: 8.598 MB / 282.7 MB
"
[Timeout remaining time 180]
Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo)
Running command: translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary")
translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.603e-06/1.603e-06, allocations: 0 / 391.8 MB, free: 45.87 MB / 330.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.585e-05/1.745e-05, allocations: 4.391 kB / 391.8 MB, free: 45.87 MB / 330.7 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary): time 0.03932/0.03933, allocations: 69.95 MB / 461.7 MB, free: 7.773 MB / 362.7 MB
Notification: Performance of NFInst.instExpressions: time 0.02856/0.0679, allocations: 22.92 MB / 484.6 MB, free: 0.7812 MB / 378.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.006745/0.07464, allocations: 155.2 kB / 484.8 MB, free: 0.6289 MB / 378.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.004009/0.07865, allocations: 1.782 MB / 486.6 MB, free: 14.83 MB / 394.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.01464/0.09329, allocations: 7.285 MB / 493.9 MB, free: 7.5 MB / 394.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.01334/0.1066, allocations: 7.829 MB / 0.4899 GB, free: 15.65 MB / 410.7 MB
Notification: Performance of NFFlatten.flatten: time 0.02809/0.1347, allocations: 22.56 MB / 0.512 GB, free: 9.027 MB / 426.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.1966/0.3314, allocations: 23.35 MB / 0.5348 GB, free: 25.17 MB / 426.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1621/0.4935, allocations: 79.28 MB / 0.6122 GB, free: 9.051 MB / 442.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.6591/1.153, allocations: 207.7 MB / 0.815 GB, free: 67.41 MB / 0.5105 GB
Notification: Performance of NFPackage.collectConstants: time 0.01107/1.164, allocations: 3.966 MB / 0.8189 GB, free: 63.45 MB / 0.5105 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.4929/1.657, allocations: 128.9 MB / 0.9448 GB, free: 120.6 MB / 0.5261 GB
Notification: Performance of NFScalarize.scalarize: time 0.02303/1.68, allocations: 20.42 MB / 0.9647 GB, free: 120.6 MB / 0.5261 GB
Notification: Performance of NFVerifyModel.verify: time 0.0322/1.712, allocations: 16.89 MB / 0.9812 GB, free: 118.8 MB / 0.5261 GB
Notification: Performance of NFConvertDAE.convert: time 0.0571/1.769, allocations: 46 MB / 1.026 GB, free: 82.41 MB / 0.5261 GB
Notification: Performance of FrontEnd - DAE generated: time 9.208e-06/1.769, allocations: 0 / 1.026 GB, free: 82.41 MB / 0.5261 GB
Notification: Performance of FrontEnd: time 2.014e-06/1.769, allocations: 0 / 1.026 GB, free: 82.41 MB / 0.5261 GB
Notification: Performance of Transformations before backend: time 0.001605/1.77, allocations: 0 / 1.026 GB, free: 82.41 MB / 0.5261 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 8166
 * Number of variables: 8166
Notification: Performance of Generate backend data structure: time 0.05957/1.83, allocations: 33.03 MB / 1.058 GB, free: 50.74 MB / 0.5261 GB
Notification: Performance of prepare preOptimizeDAE: time 4.187e-05/1.83, allocations: 8.031 kB / 1.058 GB, free: 50.73 MB / 0.5261 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02065/1.851, allocations: 6.928 MB / 1.065 GB, free: 43.79 MB / 0.5261 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.02431/1.875, allocations: 13.11 MB / 1.078 GB, free: 31.48 MB / 0.5261 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002697/1.878, allocations: 2.68 MB / 1.081 GB, free: 28.8 MB / 0.5261 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.01048/1.888, allocations: 2.786 MB / 1.083 GB, free: 26.04 MB / 0.5261 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.3911/2.279, allocations: 35.82 MB / 1.118 GB, free: 163.1 MB / 0.5262 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.002959/2.282, allocations: 114.5 kB / 1.118 GB, free: 163.1 MB / 0.5262 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01692/2.299, allocations: 1.125 MB / 1.119 GB, free: 163.1 MB / 0.5262 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001558/2.301, allocations: 1.548 MB / 1.121 GB, free: 163.1 MB / 0.5262 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0806/2.381, allocations: 28.12 MB / 1.148 GB, free: 160.2 MB / 0.5262 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.622/3.003, allocations: 221.9 MB / 1.365 GB, free: 76.33 MB / 0.5263 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.02611/3.03, allocations: 19.62 MB / 1.384 GB, free: 75.02 MB / 0.5263 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.01693/3.046, allocations: 11.96 MB / 1.396 GB, free: 74.91 MB / 0.5263 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.08174/3.128, allocations: 78.51 MB / 1.473 GB, free: 1.277 MB / 0.5263 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001263/3.128, allocations: 267.2 kB / 1.473 GB, free: 1.004 MB / 0.5263 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.0176/3.146, allocations: 6.792 MB / 1.48 GB, free: 11.46 MB / 0.5419 GB
Notification: Performance of pre-optimization done (n=3091): time 4.263e-05/3.146, allocations: 8 kB / 1.48 GB, free: 11.46 MB / 0.5419 GB
Notification: Performance of matching and sorting (n=3091): time 0.4184/3.564, allocations: 56.24 MB / 1.534 GB, free: 179.4 MB / 0.5578 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001778/3.565, allocations: 286.2 kB / 1.535 GB, free: 179.4 MB / 0.5578 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01353/3.578, allocations: 12.41 MB / 1.547 GB, free: 178.1 MB / 0.5578 GB
Notification: Performance of collectPreVariables (initialization): time 0.005455/3.584, allocations: 426.2 kB / 1.547 GB, free: 178 MB / 0.5578 GB
Notification: Performance of collectInitialEqns (initialization): time 0.006034/3.59, allocations: 12.5 MB / 1.559 GB, free: 173 MB / 0.5578 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01245/3.602, allocations: 11.83 MB / 1.571 GB, free: 166.5 MB / 0.5578 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.01002/3.612, allocations: 8.253 MB / 1.579 GB, free: 163.7 MB / 0.5578 GB
Notification: Performance of setup shared object (initialization): time 6.973e-05/3.612, allocations: 482.8 kB / 1.58 GB, free: 163.3 MB / 0.5578 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.01363/3.626, allocations: 10.96 MB / 1.59 GB, free: 157.9 MB / 0.5578 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.02261/3.648, allocations: 27.64 MB / 1.617 GB, free: 125.5 MB / 0.5578 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.07403/3.722, allocations: 58.75 MB / 1.675 GB, free: 62.14 MB / 0.5578 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004503/3.723, allocations: 96 kB / 1.675 GB, free: 62.05 MB / 0.5578 GB
Notification: Performance of matching and sorting (n=4958) (initialization): time 0.3281/4.051, allocations: 47.49 MB / 1.721 GB, free: 148.6 MB / 0.5578 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002312/4.051, allocations: 151.2 kB / 1.721 GB, free: 148.6 MB / 0.5578 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0005498/4.052, allocations: 342.7 kB / 1.722 GB, free: 148.6 MB / 0.5578 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.08845/4.14, allocations: 15.22 MB / 1.736 GB, free: 147.9 MB / 0.5578 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0222/4.162, allocations: 7.298 MB / 1.744 GB, free: 147.9 MB / 0.5578 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.008425/4.171, allocations: 17.24 MB / 1.76 GB, free: 132.7 MB / 0.5578 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02312/4.194, allocations: 1.116 MB / 1.761 GB, free: 132.7 MB / 0.5578 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.007567/4.201, allocations: 2.224 MB / 1.764 GB, free: 132.7 MB / 0.5578 GB
Warning: Assuming fixed start value for the following 18 variables:
         pulmonaryArteries.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[1]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[2]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[3]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[1]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[2]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[3]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1567
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (4024):
 * Single equations (assignments): 3985
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (4,28), (1,1), (1,3), (6,9), (1,3), (1,1), (5,10), (1,3), (6,9), (1,3), (1,2), (5,10), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.01495/4.216, allocations: 2.354 MB / 1.766 GB, free: 132.5 MB / 0.5578 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.00697/4.223, allocations: 2.555 MB / 1.768 GB, free: 130.9 MB / 0.5578 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.1394/4.363, allocations: 45.98 MB / 1.813 GB, free: 88.12 MB / 0.5578 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.07984/4.443, allocations: 32.92 MB / 1.845 GB, free: 55.15 MB / 0.5578 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 4.95e-05/4.443, allocations: 3.984 kB / 1.845 GB, free: 55.14 MB / 0.5578 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0005758/4.443, allocations: 116.1 kB / 1.846 GB, free: 55.03 MB / 0.5578 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.3902/4.833, allocations: 80.14 MB / 1.924 GB, free: 149 MB / 0.5578 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001386/4.834, allocations: 2.062 kB / 1.924 GB, free: 149 MB / 0.5578 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01632/4.85, allocations: 4.99 MB / 1.929 GB, free: 149 MB / 0.5578 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.08625/4.936, allocations: 12.35 MB / 1.941 GB, free: 148.8 MB / 0.5578 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.00567/4.942, allocations: 0.9298 MB / 1.942 GB, free: 148.8 MB / 0.5578 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.006776/4.949, allocations: 16.6 MB / 1.958 GB, free: 133.7 MB / 0.5578 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.385e-06/4.949, allocations: 0 / 1.958 GB, free: 133.7 MB / 0.5578 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.1093/5.058, allocations: 60.91 MB / 2.017 GB, free: 87.71 MB / 0.5578 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.01496/5.073, allocations: 5.937 MB / 2.023 GB, free: 84.13 MB / 0.5578 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.007135/5.08, allocations: 0.6544 MB / 2.024 GB, free: 83.53 MB / 0.5578 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01238/5.092, allocations: 0.5415 MB / 2.024 GB, free: 83 MB / 0.5578 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.006249/5.099, allocations: 2.257 MB / 2.027 GB, free: 80.74 MB / 0.5578 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.004203/5.103, allocations: 1.179 MB / 2.028 GB, free: 79.56 MB / 0.5578 GB
Notification: Performance of sorting global known variables: time 0.006485/5.109, allocations: 5.28 MB / 2.033 GB, free: 74.83 MB / 0.5578 GB
Notification: Performance of sort global known variables: time 1.81e-07/5.109, allocations: 0 / 2.033 GB, free: 74.83 MB / 0.5578 GB
Notification: Performance of remove unused functions: time 0.03552/5.145, allocations: 12.03 MB / 2.045 GB, free: 63.44 MB / 0.5578 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 263 (pulmonaryArteries.enthalpy,pulmonaryArteries.extraSubstanceAmounts[1],pulmonaryArteries.extraSubstanceAmounts[2],pulmonaryArteries.extraSubstanceAmounts[3],pulmonaryArteries.substanceMasses[1],pulmonaryArteries.substanceMasses[2],pulmonaryArteries.substanceMasses[3],pulmonaryArteries.substanceMasses[4],pulmonaryArteries.substanceMasses[5],pulmonaryArteries.substanceMasses[6],pulmonaryArteries.substanceMasses[7],pulmonaryArteries.substanceMasses[8],pulmonaryArteries.substanceMasses[9],pulmonaryArteries.substanceMasses[10],pulmonaryArteries.substanceMasses[11],pulmonaryArteries.substanceMasses[12],pulmonaryArteries.substanceMasses[13],pulmonaryArteries.substanceMasses[14],pulmonaryArteries.substanceMasses[15],pulmonaryArteries.substanceMasses[16],pulmonaryArteries.substanceMasses[17],pulmonaryArteries.substanceMasses[18],pulmonaryArteries.substanceMasses[19],pulmonaryArteries.substanceMasses[20],pulmonaryArteries.substanceMasses[21],pulmonaryArteries.substanceMasses[22],pulmonaryArteries.substanceMasses[23],pulmonaryArteries.substanceMasses[24],pulmonaryArteries.substanceMasses[25],pulmonaryArteries.substanceMasses[26],pulmonaryArteries.substanceMasses[27],pulmonaryArteries.substanceMasses[28],pulmonaryArteries.substanceMasses[29],pulmonaryArteries.substanceMasses[30],pulmonaryArteries.substanceMasses[31],pulmonaryArteries.substanceMasses[32],pulmonaryArteries.substanceMasses[33],pulmonaryArteries.substanceMasses[34],pulmonaryArteries.substanceMasses[35],pulmonaryArteries.substanceMasses[36],pulmonaryArteries.substanceMasses[37],pulmonaryArteries.substanceMasses[38],pulmonaryArteries.substanceMasses[39],pulmonaryVeins.enthalpy,pulmonaryVeins.extraSubstanceAmounts[1],pulmonaryVeins.extraSubstanceAmounts[2],pulmonaryVeins.extraSubstanceAmounts[3],pulmonaryVeins.substanceMasses[1],pulmonaryVeins.substanceMasses[2],pulmonaryVeins.substanceMasses[3],pulmonaryVeins.substanceMasses[4],pulmonaryVeins.substanceMasses[5],pulmonaryVeins.substanceMasses[6],pulmonaryVeins.substanceMasses[7],pulmonaryVeins.substanceMasses[8],pulmonaryVeins.substanceMasses[9],pulmonaryVeins.substanceMasses[10],pulmonaryVeins.substanceMasses[11],pulmonaryVeins.substanceMasses[12],pulmonaryVeins.substanceMasses[13],pulmonaryVeins.substanceMasses[14],pulmonaryVeins.substanceMasses[15],pulmonaryVeins.substanceMasses[16],pulmonaryVeins.substanceMasses[17],pulmonaryVeins.substanceMasses[18],pulmonaryVeins.substanceMasses[19],pulmonaryVeins.substanceMasses[20],pulmonaryVeins.substanceMasses[21],pulmonaryVeins.substanceMasses[22],pulmonaryVeins.substanceMasses[23],pulmonaryVeins.substanceMasses[24],pulmonaryVeins.substanceMasses[25],pulmonaryVeins.substanceMasses[26],pulmonaryVeins.substanceMasses[27],pulmonaryVeins.substanceMasses[28],pulmonaryVeins.substanceMasses[29],pulmonaryVeins.substanceMasses[30],pulmonaryVeins.substanceMasses[31],pulmonaryVeins.substanceMasses[32],pulmonaryVeins.substanceMasses[33],pulmonaryVeins.substanceMasses[34],pulmonaryVeins.substanceMasses[35],pulmonaryVeins.substanceMasses[36],pulmonaryVeins.substanceMasses[37],pulmonaryVeins.substanceMasses[38],pulmonaryVeins.substanceMasses[39],systemicArteries.chemicalSolution.substanceMasses[1],systemicArteries.chemicalSolution.substanceMasses[2],systemicArteries.chemicalSolution.substanceMasses[3],systemicArteries.chemicalSolution.substanceMasses[4],systemicArteries.chemicalSolution.substanceMasses[5],systemicArteries.chemicalSolution.substanceMasses[6],systemicArteries.chemicalSolution.substanceMasses[7],systemicArteries.chemicalSolution.substanceMasses[8],systemicArteries.chemicalSolution.substanceMasses[9],systemicArteries.chemicalSolution.substanceMasses[10],systemicArteries.chemicalSolution.substanceMasses[11],systemicArteries.chemicalSolution.substanceMasses[12],systemicArteries.chemicalSolution.substanceMasses[13],systemicArteries.chemicalSolution.substanceMasses[14],systemicArteries.chemicalSolution.substanceMasses[15],systemicArteries.chemicalSolution.substanceMasses[16],systemicArteries.chemicalSolution.substanceMasses[17],systemicArteries.chemicalSolution.substanceMasses[18],systemicArteries.chemicalSolution.substanceMasses[19],systemicArteries.chemicalSolution.substanceMasses[20],systemicArteries.chemicalSolution.substanceMasses[21],systemicArteries.chemicalSolution.substanceMasses[22],systemicArteries.chemicalSolution.substanceMasses[23],systemicArteries.chemicalSolution.substanceMasses[24],systemicArteries.chemicalSolution.substanceMasses[25],systemicArteries.chemicalSolution.substanceMasses[26],systemicArteries.chemicalSolution.substanceMasses[27],systemicArteries.chemicalSolution.substanceMasses[28],systemicArteries.chemicalSolution.substanceMasses[29],systemicArteries.chemicalSolution.substanceMasses[30],systemicArteries.chemicalSolution.substanceMasses[31],systemicArteries.chemicalSolution.substanceMasses[32],systemicArteries.chemicalSolution.substanceMasses[33],systemicArteries.chemicalSolution.substanceMasses[34],systemicArteries.chemicalSolution.substanceMasses[35],systemicArteries.chemicalSolution.substanceMasses[36],systemicArteries.chemicalSolution.substanceMasses[37],systemicArteries.chemicalSolution.substanceMasses[38],systemicArteries.chemicalSolution.substanceMasses[39],systemicArteries.enthalpy,systemicArteries.extraSubstanceAmounts[1],systemicArteries.extraSubstanceAmounts[2],systemicArteries.extraSubstanceAmounts[3],systemicVeins.chemicalSolution.substanceMasses[1],systemicVeins.chemicalSolution.substanceMasses[2],systemicVeins.chemicalSolution.substanceMasses[3],systemicVeins.chemicalSolution.substanceMasses[4],systemicVeins.chemicalSolution.substanceMasses[5],systemicVeins.chemicalSolution.substanceMasses[6],systemicVeins.chemicalSolution.substanceMasses[7],systemicVeins.chemicalSolution.substanceMasses[8],systemicVeins.chemicalSolution.substanceMasses[9],systemicVeins.chemicalSolution.substanceMasses[10],systemicVeins.chemicalSolution.substanceMasses[11],systemicVeins.chemicalSolution.substanceMasses[12],systemicVeins.chemicalSolution.substanceMasses[13],systemicVeins.chemicalSolution.substanceMasses[14],systemicVeins.chemicalSolution.substanceMasses[15],systemicVeins.chemicalSolution.substanceMasses[16],systemicVeins.chemicalSolution.substanceMasses[17],systemicVeins.chemicalSolution.substanceMasses[18],systemicVeins.chemicalSolution.substanceMasses[19],systemicVeins.chemicalSolution.substanceMasses[20],systemicVeins.chemicalSolution.substanceMasses[21],systemicVeins.chemicalSolution.substanceMasses[22],systemicVeins.chemicalSolution.substanceMasses[23],systemicVeins.chemicalSolution.substanceMasses[24],systemicVeins.chemicalSolution.substanceMasses[25],systemicVeins.chemicalSolution.substanceMasses[26],systemicVeins.chemicalSolution.substanceMasses[27],systemicVeins.chemicalSolution.substanceMasses[28],systemicVeins.chemicalSolution.substanceMasses[29],systemicVeins.chemicalSolution.substanceMasses[30],systemicVeins.chemicalSolution.substanceMasses[31],systemicVeins.chemicalSolution.substanceMasses[32],systemicVeins.chemicalSolution.substanceMasses[33],systemicVeins.chemicalSolution.substanceMasses[34],systemicVeins.chemicalSolution.substanceMasses[35],systemicVeins.chemicalSolution.substanceMasses[36],systemicVeins.chemicalSolution.substanceMasses[37],systemicVeins.chemicalSolution.substanceMasses[38],systemicVeins.chemicalSolution.substanceMasses[39],systemicVeins.enthalpy,systemicVeins.extraSubstanceAmounts[1],systemicVeins.extraSubstanceAmounts[2],systemicVeins.extraSubstanceAmounts[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[1],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[2],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[4],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[5],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[6],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[7],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[8],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[9],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[10],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[11],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[12],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[13],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[14],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[15],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[16],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[17],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[18],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[19],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[20],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[21],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[22],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[23],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[24],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[25],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[26],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[27],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[28],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[29],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[30],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[31],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[32],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[33],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[34],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[35],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[36],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[37],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[38],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[39],respiratoryUnit[1].pulmCapysVentilated.enthalpy,respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[1],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[2],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[4],respiratoryUnit[1].alveoli.enthalpy,tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[1],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[2],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[3],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[4],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[5],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[6],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[7],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[8],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[9],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[10],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[11],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[12],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[13],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[14],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[15],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[16],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[17],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[18],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[19],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[20],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[21],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[22],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[23],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[24],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[25],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[26],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[27],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[28],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[29],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[30],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[31],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[32],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[33],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[34],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[35],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[36],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[37],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[38],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[39],tissueUnit[1].systemicCapillaries.enthalpy,tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (2862):
 * Single equations (assignments): 2827
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 16
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (9,30), (1,1), (1,4), (5,11), (1,4), (1,1), (5,11), (1,4), (5,11), (1,4), (1,3), (6,10), (1,4)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.008549/5.153, allocations: 2.747 MB / 2.047 GB, free: 61.27 MB / 0.5578 GB
Notification: Performance of simCode: created initialization part: time 0.05652/5.21, allocations: 34.16 MB / 2.081 GB, free: 28.04 MB / 0.5578 GB
Notification: Performance of simCode: created event and clocks part: time 8.185e-06/5.21, allocations: 3.516 kB / 2.081 GB, free: 28.04 MB / 0.5578 GB
Notification: Performance of simCode: created simulation system equations: time 0.205/5.415, allocations: 16.99 MB / 2.097 GB, free: 155.4 MB / 0.5578 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05101/5.466, allocations: 15.44 MB / 2.112 GB, free: 153.6 MB / 0.5578 GB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/kg: Unit not found
Error: Error parsing unit %: Parse error
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kDa: Unit not found
Error: Error parsing unit l/(cmH2O.s): Unit not found
Error: Error parsing unit meq/min: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1276/5.594, allocations: 76.08 MB / 2.187 GB, free: 122.7 MB / 0.5578 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01642/5.61, allocations: 7.983 MB / 2.194 GB, free: 116.2 MB / 0.5578 GB
Notification: Performance of simCode: alias equations: time 0.03101/5.641, allocations: 4.899 MB / 2.199 GB, free: 111.3 MB / 0.5578 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.04395/5.685, allocations: 10.53 MB / 2.209 GB, free: 100.8 MB / 0.5578 GB
Notification: Performance of SimCode: time 2.555e-06/5.685, allocations: 0 / 2.209 GB, free: 100.8 MB / 0.5578 GB
Notification: Performance of Templates: time 1.623/7.308, allocations: 0.7963 GB / 3.006 GB, free: 134.7 MB / 0.589 GB
"
[Timeout remaining time 653]
make -j1 -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.makefile [Timeout 660]
(rm -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; mkfifo Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe >> ../files/Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.sim & ./Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary -abortSlowSimulation -alarm=240  -lv LOG_STATS > Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 32.55933075491339]