Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009669/0.0009669, allocations: 82.05 kB / 19.87 MB, free: 4.621 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009536/0.0009536, allocations: 169.7 kB / 23.27 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.019/1.019, allocations: 177.2 MB / 203.7 MB, free: 5.523 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.09037/0.09037, allocations: 17.46 MB / 277.7 MB, free: 11.42 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.604e-06/1.604e-06, allocations: 0 / 354 MB, free: 9.578 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 8.255e-06/9.859e-06, allocations: 2.312 kB / 354 MB, free: 9.574 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Obsolete.mo:14335:7-14335:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2747/0.2747, allocations: 78.55 MB / 432.6 MB, free: 12.4 MB / 330.8 MB
Notification: Performance of NFInst.instExpressions: time 0.05542/0.3301, allocations: 65.29 MB / 497.9 MB, free: 5.023 MB / 362.8 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01035/0.3405, allocations: 230.1 kB / 498.1 MB, free: 4.797 MB / 362.8 MB
Notification: Performance of NFTyping.typeComponents: time 0.006509/0.347, allocations: 2.733 MB / 0.4891 GB, free: 2.039 MB / 362.8 MB
Notification: Performance of NFTyping.typeBindings: time 0.02222/0.3692, allocations: 9.4 MB / 0.4983 GB, free: 8.57 MB / 378.8 MB
Notification: Performance of NFTyping.typeClassSections: time 0.02771/0.3969, allocations: 14.84 MB / 0.5127 GB, free: 9.68 MB / 394.8 MB
Notification: Performance of NFFlatten.flatten: time 0.3831/0.7801, allocations: 91.33 MB / 0.6019 GB, free: 12.29 MB / 442.9 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.05259/0.8326, allocations: 54.61 MB / 0.6553 GB, free: 10.89 MB / 458.9 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1474/0.9801, allocations: 75.04 MB / 0.7285 GB, free: 4.156 MB / 0.495 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.4892/1.469, allocations: 51.47 MB / 0.7788 GB, free: 50 MB / 0.5265 GB
Notification: Performance of NFPackage.collectConstants: time 0.03718/1.506, allocations: 12.2 MB / 0.7907 GB, free: 50 MB / 0.5265 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.05282/1.559, allocations: 17.34 MB / 0.8076 GB, free: 50 MB / 0.5265 GB
Notification: Performance of NFScalarize.scalarize: time 0.04066/1.6, allocations: 24.28 MB / 0.8314 GB, free: 50 MB / 0.5265 GB
Notification: Performance of NFVerifyModel.verify: time 0.0684/1.668, allocations: 31.13 MB / 0.8618 GB, free: 40.46 MB / 0.5265 GB
Notification: Performance of NFConvertDAE.convert: time 0.1191/1.787, allocations: 86.99 MB / 0.9467 GB, free: 14.8 MB / 0.5578 GB
Notification: Performance of FrontEnd - DAE generated: time 5.931e-06/1.787, allocations: 0 / 0.9467 GB, free: 14.8 MB / 0.5578 GB
Notification: Performance of FrontEnd: time 1.092e-06/1.787, allocations: 3.188 kB / 0.9467 GB, free: 14.8 MB / 0.5578 GB
Notification: Performance of Transformations before backend: time 0.003304/1.791, allocations: 2.406 kB / 0.9467 GB, free: 14.8 MB / 0.5578 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.3493/2.14, allocations: 63.33 MB / 1.009 GB, free: 118.4 MB / 0.5734 GB
Notification: Performance of prepare preOptimizeDAE: time 4.055e-05/2.14, allocations: 10.06 kB / 1.009 GB, free: 118.4 MB / 0.5734 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.07679/2.217, allocations: 19.72 MB / 1.028 GB, free: 114.9 MB / 0.5734 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.06553/2.282, allocations: 34.47 MB / 1.061 GB, free: 100.9 MB / 0.5734 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005332/2.288, allocations: 9.208 MB / 1.07 GB, free: 92.54 MB / 0.5734 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02009/2.308, allocations: 4.564 MB / 1.075 GB, free: 90.96 MB / 0.5734 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.1418/2.45, allocations: 52.86 MB / 1.127 GB, free: 47.8 MB / 0.5734 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.004495/2.454, allocations: 30.56 kB / 1.127 GB, free: 47.79 MB / 0.5734 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.03178/2.486, allocations: 1.762 MB / 1.128 GB, free: 46.02 MB / 0.5734 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0006747/2.487, allocations: 1.059 MB / 1.129 GB, free: 44.96 MB / 0.5734 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.1145/2.601, allocations: 50.22 MB / 1.178 GB, free: 10.8 MB / 0.589 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 1.033/3.634, allocations: 264.8 MB / 1.437 GB, free: 97.68 MB / 0.6203 GB
Notification: Performance of preOpt comSubExp (simulation): time 2.095/5.73, allocations: 0.964 GB / 2.401 GB, free: 54.02 MB / 0.6671 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.03797/5.768, allocations: 19.84 MB / 2.42 GB, free: 36.05 MB / 0.6671 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.521/6.289, allocations: 153 MB / 2.57 GB, free: 116.7 MB / 0.6671 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001808/6.289, allocations: 335.8 kB / 2.57 GB, free: 116.4 MB / 0.6671 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.06398/6.353, allocations: 26.7 MB / 2.596 GB, free: 109.2 MB / 0.6671 GB
Notification: Performance of pre-optimization done (n=2949): time 0.0001912/6.353, allocations: 2.672 kB / 2.596 GB, free: 109.2 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=3351): time 1.159/7.512, allocations: 190.1 MB / 2.782 GB, free: 153.4 MB / 0.6671 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001943/7.512, allocations: 444.1 kB / 2.782 GB, free: 153.2 MB / 0.6671 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.04148/7.554, allocations: 25.27 MB / 2.807 GB, free: 148.2 MB / 0.6671 GB
Notification: Performance of collectPreVariables (initialization): time 0.009835/7.564, allocations: 0.5658 MB / 2.807 GB, free: 148.1 MB / 0.6671 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01713/7.581, allocations: 23.38 MB / 2.83 GB, free: 138.7 MB / 0.6671 GB
Notification: Performance of collectInitialBindings (initialization): time 0.02049/7.601, allocations: 12.93 MB / 2.843 GB, free: 130.1 MB / 0.6671 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.03911/7.64, allocations: 10.42 MB / 2.853 GB, free: 120.6 MB / 0.6671 GB
Notification: Performance of setup shared object (initialization): time 4.132e-05/7.641, allocations: 480.8 kB / 2.854 GB, free: 120.1 MB / 0.6671 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.02609/7.667, allocations: 9.221 MB / 2.863 GB, free: 110.9 MB / 0.6671 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0403/7.707, allocations: 29.92 MB / 2.892 GB, free: 73.91 MB / 0.6671 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.05622/7.763, allocations: 43.96 MB / 2.935 GB, free: 24.22 MB / 0.6671 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004537/7.764, allocations: 124 kB / 2.935 GB, free: 24.1 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=5583) (initialization): time 0.8727/8.636, allocations: 122.3 MB / 3.054 GB, free: 114.9 MB / 0.6671 GB
Notification: Performance of prepare postOptimizeDAE: time 0.00033/8.637, allocations: 192 kB / 3.054 GB, free: 114.8 MB / 0.6671 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0005551/8.637, allocations: 436 kB / 3.055 GB, free: 114.3 MB / 0.6671 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.5728/9.21, allocations: 155.9 MB / 3.207 GB, free: 139.4 MB / 0.6671 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.03163/9.242, allocations: 10.55 MB / 3.217 GB, free: 139.4 MB / 0.6671 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.2086/9.45, allocations: 78.32 MB / 3.294 GB, free: 109.5 MB / 0.6671 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.04153/9.492, allocations: 1.384 MB / 3.295 GB, free: 108.7 MB / 0.6671 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01462/9.506, allocations: 2.394 MB / 3.298 GB, free: 107.8 MB / 0.6671 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1983
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5439):
 * Single equations (assignments): 5430
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03796/9.544, allocations: 2.904 MB / 3.3 GB, free: 106.4 MB / 0.6671 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.03013/9.574, allocations: 4.167 MB / 3.304 GB, free: 105.6 MB / 0.6671 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.3703/9.945, allocations: 79.62 MB / 3.382 GB, free: 28.04 MB / 0.6671 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.000271/9.945, allocations: 356 kB / 3.383 GB, free: 27.69 MB / 0.6671 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0003753/9.945, allocations: 56 kB / 3.383 GB, free: 27.63 MB / 0.6671 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.000994/9.946, allocations: 175.3 kB / 3.383 GB, free: 27.46 MB / 0.6671 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.8025/10.75, allocations: 137.3 MB / 3.517 GB, free: 123.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002482/10.75, allocations: 11.03 kB / 3.517 GB, free: 123.6 MB / 0.6828 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02492/10.77, allocations: 6.762 MB / 3.523 GB, free: 123.5 MB / 0.6828 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1399/10.91, allocations: 51.71 MB / 3.574 GB, free: 96.86 MB / 0.6828 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.009385/10.92, allocations: 1.397 MB / 3.575 GB, free: 95.46 MB / 0.6828 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1242/11.05, allocations: 46.47 MB / 3.621 GB, free: 48.78 MB / 0.6828 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 9.137e-06/11.05, allocations: 14.34 kB / 3.621 GB, free: 48.77 MB / 0.6828 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.743/11.79, allocations: 93.58 MB / 3.712 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.03586/11.83, allocations: 8.719 MB / 3.721 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01953/11.85, allocations: 0.8907 MB / 3.722 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.03451/11.88, allocations: 0.7526 MB / 3.722 GB, free: 117.6 MB / 0.6828 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01578/11.9, allocations: 3.894 MB / 3.726 GB, free: 117.5 MB / 0.6828 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.009632/11.91, allocations: 1.111 MB / 3.727 GB, free: 117.5 MB / 0.6828 GB
Notification: Performance of sorting global known variables: time 0.02705/11.93, allocations: 13.57 MB / 3.74 GB, free: 116.6 MB / 0.6828 GB
Notification: Performance of sort global known variables: time 6.21e-07/11.93, allocations: 1.938 kB / 3.74 GB, free: 116.6 MB / 0.6828 GB
Notification: Performance of remove unused functions: time 0.07592/12.01, allocations: 15.4 MB / 3.755 GB, free: 116.6 MB / 0.6828 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3666):
 * Single equations (assignments): 3657
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.01555/12.02, allocations: 3.529 MB / 3.759 GB, free: 116.4 MB / 0.6828 GB
Notification: Performance of simCode: created initialization part: time 0.1055/12.13, allocations: 35.78 MB / 3.794 GB, free: 98.75 MB / 0.6828 GB
Notification: Performance of simCode: created event and clocks part: time 1.398e-05/12.13, allocations: 0 / 3.794 GB, free: 98.75 MB / 0.6828 GB
Notification: Performance of simCode: created simulation system equations: time 0.05887/12.19, allocations: 19.53 MB / 3.813 GB, free: 84.25 MB / 0.6828 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05232/12.24, allocations: 8.178 MB / 3.821 GB, free: 79.88 MB / 0.6828 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.1902/12.43, allocations: 90.24 MB / 3.909 GB, free: 14.59 MB / 0.6984 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.2894/12.72, allocations: 13.91 MB / 3.923 GB, free: 130.9 MB / 0.6984 GB
Notification: Performance of simCode: alias equations: time 0.04275/12.76, allocations: 5.139 MB / 3.928 GB, free: 130.4 MB / 0.6984 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.05491/12.82, allocations: 8.678 MB / 3.936 GB, free: 130.3 MB / 0.6984 GB
Notification: Performance of SimCode: time 2.034e-06/12.82, allocations: 0 / 3.936 GB, free: 130.3 MB / 0.6984 GB
Notification: Performance of Templates: time 2.253/15.07, allocations: 0.9732 GB / 4.909 GB, free: 147.7 MB / 0.714 GB
"
[Timeout remaining time 645]
make -j1 -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_master_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 38.898500161245465]