Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001193/0.001193, allocations: 81.17 kB / 19.87 MB, free: 4.621 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001315/0.001315, allocations: 169 kB / 23.27 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.018/1.018, allocations: 177.1 MB / 203.7 MB, free: 5.52 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.09119/0.09119, allocations: 17.46 MB / 277.7 MB, free: 11.42 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.154e-06/2.154e-06, allocations: 0 / 354 MB, free: 9.57 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.005e-05/2.22e-05, allocations: 6.25 kB / 354 MB, free: 9.562 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.03389/0.03391, allocations: 35.85 MB / 389.9 MB, free: 5.82 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01249/0.0464, allocations: 10.88 MB / 400.7 MB, free: 10.89 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001586/0.04799, allocations: 79.38 kB / 400.8 MB, free: 10.82 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.003633/0.05162, allocations: 1.985 MB / 402.8 MB, free: 8.82 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.003504/0.05513, allocations: 1.544 MB / 404.3 MB, free: 7.266 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.005621/0.06075, allocations: 4.278 MB / 408.6 MB, free: 2.969 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.1462/0.207, allocations: 3.626 MB / 412.3 MB, free: 36.19 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001031/0.208, allocations: 0.5469 MB / 412.8 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002842/0.2108, allocations: 2.054 MB / 414.9 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002499/0.2133, allocations: 1.623 MB / 416.5 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0008459/0.2142, allocations: 311.5 kB / 416.8 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.004913/0.2191, allocations: 2.053 MB / 418.8 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001016/0.2201, allocations: 1.094 MB / 419.9 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.002227/0.2223, allocations: 1.143 MB / 421.1 MB, free: 36.05 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.006695/0.229, allocations: 4.852 MB / 425.9 MB, free: 35.34 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 5.139e-06/0.229, allocations: 0 / 425.9 MB, free: 35.34 MB / 330.7 MB
Notification: Performance of FrontEnd: time 9.72e-07/0.229, allocations: 0 / 425.9 MB, free: 35.34 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 0.0001329/0.2292, allocations: 6.469 kB / 425.9 MB, free: 35.34 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.005889/0.2351, allocations: 4.614 MB / 430.5 MB, free: 32.86 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.483e-05/0.2351, allocations: 11.12 kB / 430.6 MB, free: 32.86 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002225/0.2373, allocations: 1.707 MB / 432.3 MB, free: 32.19 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.001911/0.2393, allocations: 1.947 MB / 434.2 MB, free: 31.12 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0002173/0.2395, allocations: 0.4993 MB / 434.7 MB, free: 30.71 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002489/0.2397, allocations: 294.3 kB / 435 MB, free: 30.62 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.003463/0.2432, allocations: 3.748 MB / 438.7 MB, free: 29.62 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 3.973e-05/0.2432, allocations: 2.875 kB / 438.7 MB, free: 29.62 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001378/0.2434, allocations: 119.3 kB / 438.9 MB, free: 29.51 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0002596/0.2436, allocations: 470.8 kB / 439.3 MB, free: 29.05 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.004253/0.2479, allocations: 4.506 MB / 443.8 MB, free: 24.54 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.0161/0.264, allocations: 14.84 MB / 458.7 MB, free: 10.25 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001504/0.2655, allocations: 1.12 MB / 459.8 MB, free: 9.148 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0009112/0.2664, allocations: 0.7337 MB / 460.5 MB, free: 8.414 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.01007/0.2765, allocations: 9.697 MB / 470.2 MB, free: 14.83 MB / 346.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.428e-05/0.2765, allocations: 56.27 kB / 470.3 MB, free: 14.77 MB / 346.7 MB
Notification: Performance of pre-optimization done (n=188): time 3.898e-06/0.2765, allocations: 0 / 470.3 MB, free: 14.77 MB / 346.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.1319293389096856]