Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009532/0.0009532, allocations: 86.05 kB / 19.87 MB, free: 4.617 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.00151/0.00151, allocations: 170 kB / 23.27 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.968/0.968, allocations: 177.1 MB / 203.7 MB, free: 5.516 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.08479/0.08479, allocations: 17.37 MB / 277.6 MB, free: 11.5 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.HydrogenCombustion,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.HydrogenCombustion")
translateModel(Chemical.Obsolete.Examples.HydrogenCombustion,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.HydrogenCombustion") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.562e-06/1.562e-06, allocations: 0 / 353.9 MB, free: 9.727 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 1.527e-05/1.683e-05, allocations: 2.312 kB / 353.9 MB, free: 9.723 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.HydrogenCombustion): time 0.02393/0.02395, allocations: 32.01 MB / 385.9 MB, free: 9.828 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.2624/0.2863, allocations: 134.3 MB / 0.508 GB, free: 2.828 MB / 378.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.001292/0.2876, allocations: 35.75 kB / 0.5081 GB, free: 2.793 MB / 378.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0008523/0.2884, allocations: 369.5 kB / 0.5084 GB, free: 2.434 MB / 378.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.002321/0.2908, allocations: 1.144 MB / 0.5095 GB, free: 1.285 MB / 378.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.002942/0.2937, allocations: 1.583 MB / 0.5111 GB, free: 15.7 MB / 394.7 MB
Notification: Performance of NFFlatten.flatten: time 0.002373/0.2961, allocations: 2.69 MB / 0.5137 GB, free: 12.99 MB / 394.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001243/0.2973, allocations: 1.257 MB / 0.5149 GB, free: 11.69 MB / 394.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.001653/0.299, allocations: 1.77 MB / 0.5167 GB, free: 9.914 MB / 394.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.001055/0.3, allocations: 1.165 MB / 0.5178 GB, free: 8.746 MB / 394.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.000292/0.3003, allocations: 224 kB / 0.518 GB, free: 8.527 MB / 394.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.001615/0.3019, allocations: 1.029 MB / 0.519 GB, free: 7.496 MB / 394.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0003276/0.3023, allocations: 0.588 MB / 0.5196 GB, free: 6.906 MB / 394.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006561/0.3029, allocations: 0.8497 MB / 0.5204 GB, free: 6.055 MB / 394.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.002417/0.3053, allocations: 2.959 MB / 0.5233 GB, free: 3.086 MB / 394.7 MB
Notification: Performance of FrontEnd - DAE generated: time 5.24e-06/0.3054, allocations: 3.938 kB / 0.5233 GB, free: 3.082 MB / 394.7 MB
Notification: Performance of FrontEnd: time 1.012e-06/0.3054, allocations: 0 / 0.5233 GB, free: 3.082 MB / 394.7 MB
Notification: Performance of Transformations before backend: time 1.192e-05/0.3054, allocations: 0 / 0.5233 GB, free: 3.082 MB / 394.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 492
 * Number of variables: 492
Notification: Performance of Generate backend data structure: time 0.002387/0.3078, allocations: 2.689 MB / 0.5259 GB, free: 352 kB / 394.7 MB
Notification: Performance of prepare preOptimizeDAE: time 3.708e-05/0.3078, allocations: 8.031 kB / 0.526 GB, free: 344 kB / 394.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002266/0.3101, allocations: 1.235 MB / 0.5272 GB, free: 15.09 MB / 410.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0009035/0.311, allocations: 0.9271 MB / 0.5281 GB, free: 14.14 MB / 410.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0001266/0.3111, allocations: 255.2 kB / 0.5283 GB, free: 13.86 MB / 410.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0001854/0.3113, allocations: 196.3 kB / 0.5285 GB, free: 13.67 MB / 410.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001444/0.3127, allocations: 1.582 MB / 0.53 GB, free: 12.03 MB / 410.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 2.727e-05/0.3127, allocations: 12.11 kB / 0.5301 GB, free: 12.02 MB / 410.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001139/0.3129, allocations: 76.38 kB / 0.5301 GB, free: 11.95 MB / 410.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 2.49e-05/0.3129, allocations: 47.94 kB / 0.5302 GB, free: 11.9 MB / 410.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.001238/0.3141, allocations: 1.276 MB / 0.5314 GB, free: 10.62 MB / 410.7 MB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.005352/0.3195, allocations: 6.093 MB / 0.5374 GB, free: 4.379 MB / 410.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.001628/0.3211, allocations: 1.28 MB / 0.5386 GB, free: 3.074 MB / 410.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0004005/0.3215, allocations: 455.7 kB / 0.5391 GB, free: 2.621 MB / 410.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.002934/0.3244, allocations: 2.933 MB / 0.5419 GB, free: 15.7 MB / 426.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 2.804e-05/0.3245, allocations: 50.7 kB / 0.542 GB, free: 15.64 MB / 426.7 MB
Notification: Performance of pre-optimization done (n=132): time 2.384e-06/0.3245, allocations: 0 / 0.542 GB, free: 15.64 MB / 426.7 MB
Notification: Performance of matching and sorting (n=174): time 0.007158/0.3316, allocations: 4.72 MB / 0.5466 GB, free: 10.82 MB / 426.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.308e-05/0.3317, allocations: 99.11 kB / 0.5467 GB, free: 10.7 MB / 426.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0006115/0.3323, allocations: 0.9611 MB / 0.5476 GB, free: 9.719 MB / 426.7 MB
Notification: Performance of collectPreVariables (initialization): time 6.949e-05/0.3323, allocations: 53.7 kB / 0.5477 GB, free: 9.66 MB / 426.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0004279/0.3328, allocations: 0.9987 MB / 0.5486 GB, free: 8.648 MB / 426.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0003078/0.3331, allocations: 0.6234 MB / 0.5492 GB, free: 8.02 MB / 426.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0003385/0.3334, allocations: 413.1 kB / 0.5496 GB, free: 7.605 MB / 426.7 MB
Notification: Performance of setup shared object (initialization): time 9.485e-05/0.3335, allocations: 476.8 kB / 0.5501 GB, free: 7.137 MB / 426.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0003379/0.3339, allocations: 311.8 kB / 0.5504 GB, free: 6.828 MB / 426.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0006806/0.3345, allocations: 1.105 MB / 0.5515 GB, free: 5.379 MB / 426.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.001168/0.3357, allocations: 1.611 MB / 0.553 GB, free: 3.426 MB / 426.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 7.014e-06/0.3357, allocations: 7.938 kB / 0.553 GB, free: 3.418 MB / 426.7 MB
Notification: Performance of matching and sorting (n=262) (initialization): time 0.00231/0.338, allocations: 2.013 MB / 0.555 GB, free: 1.371 MB / 426.7 MB
Notification: Performance of prepare postOptimizeDAE: time 1.986e-05/0.338, allocations: 12 kB / 0.555 GB, free: 1.359 MB / 426.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.527e-05/0.3381, allocations: 20.84 kB / 0.555 GB, free: 1.34 MB / 426.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 0.001142/0.3392, allocations: 0.5844 MB / 0.5556 GB, free: 0.7344 MB / 426.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0009567/0.3401, allocations: 479.3 kB / 0.5561 GB, free: 272 kB / 426.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.175/0.5152, allocations: 10.56 MB / 0.5664 GB, free: 30.2 MB / 426.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.001003/0.5162, allocations: 63.53 kB / 0.5665 GB, free: 30.2 MB / 426.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.000219/0.5164, allocations: 137.1 kB / 0.5666 GB, free: 30.2 MB / 426.7 MB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 80
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (208):
 * Single equations (assignments): 202
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 6
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 3 systems
   {(1,9,100.0%), (1,11,100.0%), (1,6,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,6), (1,10), (1,12)}
Notification: Performance of prepare postOptimizeDAE: time 0.00053/0.5169, allocations: 285.4 kB / 0.5669 GB, free: 30.04 MB / 426.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0002911/0.5172, allocations: 209.4 kB / 0.5671 GB, free: 30.04 MB / 426.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.00296/0.5202, allocations: 2.033 MB / 0.569 GB, free: 29.88 MB / 426.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 1.612e-05/0.5202, allocations: 18.75 kB / 0.5691 GB, free: 29.88 MB / 426.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 1.66e-05/0.5202, allocations: 8.562 kB / 0.5691 GB, free: 29.88 MB / 426.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.567e-05/0.5202, allocations: 8.406 kB / 0.5691 GB, free: 29.88 MB / 426.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.004449/0.5247, allocations: 3.182 MB / 0.5722 GB, free: 29.29 MB / 426.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 6.703e-06/0.5247, allocations: 2.375 kB / 0.5722 GB, free: 29.29 MB / 426.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0009256/0.5256, allocations: 369.7 kB / 0.5725 GB, free: 29.29 MB / 426.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 0.001117/0.5267, allocations: 488.8 kB / 0.573 GB, free: 29.23 MB / 426.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0001191/0.5268, allocations: 72.84 kB / 0.5731 GB, free: 29.23 MB / 426.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.003767/0.5306, allocations: 8.915 MB / 0.5818 GB, free: 21.62 MB / 426.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 2.044e-06/0.5306, allocations: 0.625 kB / 0.5818 GB, free: 21.62 MB / 426.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.00228/0.5329, allocations: 2.258 MB / 0.584 GB, free: 21.09 MB / 426.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.000171/0.533, allocations: 134.7 kB / 0.5841 GB, free: 21 MB / 426.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001143/0.5332, allocations: 38.78 kB / 0.5841 GB, free: 21 MB / 426.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0003548/0.5335, allocations: 36.66 kB / 0.5842 GB, free: 21 MB / 426.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0002319/0.5337, allocations: 186.7 kB / 0.5844 GB, free: 21 MB / 426.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0001034/0.5338, allocations: 102.9 kB / 0.5845 GB, free: 21 MB / 426.7 MB
Notification: Performance of sorting global known variables: time 0.0003304/0.5342, allocations: 0.4996 MB / 0.5849 GB, free: 20.84 MB / 426.7 MB
Notification: Performance of sort global known variables: time 6e-08/0.5342, allocations: 0.7188 kB / 0.5849 GB, free: 20.84 MB / 426.7 MB
Notification: Performance of remove unused functions: time 0.001682/0.5359, allocations: 0.64 MB / 0.5856 GB, free: 20.84 MB / 426.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 6
 * Number of states: 8 (H2_gas.logn,O2_gas.logn,H2O_gas.molarVolume,H2O_gas.logn,H2_gas1.logn,O2_gas1.logn,H2O_gas1.molarVolume,H2O_gas1.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (153):
 * Single equations (assignments): 148
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 5
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 4 systems
   {(1,9,100.0%), (1,6,100.0%), (1,7,100.0%), (1,8,100.0%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 1 system
   {(1,10)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0007492/0.5366, allocations: 448 kB / 0.586 GB, free: 20.75 MB / 426.7 MB
Notification: Performance of simCode: created initialization part: time 0.001944/0.5386, allocations: 2.039 MB / 0.588 GB, free: 19.97 MB / 426.7 MB
Notification: Performance of simCode: created event and clocks part: time 3.065e-06/0.5386, allocations: 2.188 kB / 0.588 GB, free: 19.97 MB / 426.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.0009623/0.5395, allocations: 1.454 MB / 0.5894 GB, free: 19.24 MB / 426.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0008546/0.5404, allocations: 351.8 kB / 0.5897 GB, free: 19.21 MB / 426.7 MB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.003988/0.5444, allocations: 3.188 MB / 0.5929 GB, free: 17.82 MB / 426.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0003481/0.5447, allocations: 374.4 kB / 0.5932 GB, free: 17.72 MB / 426.7 MB
Notification: Performance of simCode: alias equations: time 0.0009719/0.5457, allocations: 400.1 kB / 0.5936 GB, free: 17.68 MB / 426.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.0008262/0.5465, allocations: 0.5465 MB / 0.5941 GB, free: 17.61 MB / 426.7 MB
Notification: Performance of SimCode: time 7.91e-07/0.5465, allocations: 0 / 0.5941 GB, free: 17.61 MB / 426.7 MB
Notification: Performance of Templates: time 0.03416/0.5807, allocations: 34.49 MB / 0.6278 GB, free: 15.52 MB / 442.7 MB
"
[Timeout remaining time 659]
make -j1 -f Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.sim & ./Chemical_Chemical.Obsolete.Examples.HydrogenCombustion -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.HydrogenCombustion.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.264411710202694]