Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001402/0.001402, allocations: 81.17 kB / 19.87 MB, free: 4.621 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001167/0.001167, allocations: 169 kB / 23.27 MB, free: 1.223 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9594/0.9594, allocations: 177.2 MB / 203.7 MB, free: 5.52 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo): time 0.08849/0.08849, allocations: 17.39 MB / 277.6 MB, free: 11.5 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57")
translateModel(Chemical.Obsolete.Examples.Hemoglobin.Joels57,tolerance=1e-05,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.473e-06/1.473e-06, allocations: 0 / 353.9 MB, free: 9.699 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.101e-05/2.248e-05, allocations: 4.703 kB / 353.9 MB, free: 9.695 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 2.0.0/Obsolete.mo:14337:7-14337:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Obsolete.Examples.Hemoglobin.Joels57): time 0.2767/0.2768, allocations: 78.54 MB / 432.4 MB, free: 13 MB / 330.8 MB
Notification: Performance of NFInst.instExpressions: time 0.06034/0.3371, allocations: 65.3 MB / 497.7 MB, free: 5.359 MB / 362.8 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.01174/0.3488, allocations: 226.2 kB / 498 MB, free: 5.137 MB / 362.8 MB
Notification: Performance of NFTyping.typeComponents: time 0.009343/0.3582, allocations: 2.733 MB / 0.489 GB, free: 2.379 MB / 362.8 MB
Notification: Performance of NFTyping.typeBindings: time 0.02588/0.3841, allocations: 9.403 MB / 0.4981 GB, free: 8.906 MB / 378.8 MB
Notification: Performance of NFTyping.typeClassSections: time 0.02818/0.4122, allocations: 14.84 MB / 0.5126 GB, free: 10.02 MB / 394.8 MB
Notification: Performance of NFFlatten.flatten: time 0.386/0.7982, allocations: 91.33 MB / 0.6018 GB, free: 12.58 MB / 442.9 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.06109/0.8593, allocations: 54.61 MB / 0.6552 GB, free: 11.13 MB / 458.9 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1266/0.9859, allocations: 75.03 MB / 0.7284 GB, free: 4.703 MB / 0.495 GB
Notification: Performance of NFSimplifyModel.simplify: time 0.4537/1.44, allocations: 51.48 MB / 0.7787 GB, free: 50.05 MB / 0.5265 GB
Notification: Performance of NFPackage.collectConstants: time 0.03556/1.475, allocations: 12.21 MB / 0.7906 GB, free: 50.05 MB / 0.5265 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.05561/1.531, allocations: 17.33 MB / 0.8075 GB, free: 50.05 MB / 0.5265 GB
Notification: Performance of NFScalarize.scalarize: time 0.03792/1.569, allocations: 24.28 MB / 0.8313 GB, free: 50.05 MB / 0.5265 GB
Notification: Performance of NFVerifyModel.verify: time 0.06226/1.631, allocations: 31.12 MB / 0.8616 GB, free: 40.48 MB / 0.5265 GB
Notification: Performance of NFConvertDAE.convert: time 0.115/1.746, allocations: 86.99 MB / 0.9466 GB, free: 15.2 MB / 0.5578 GB
Notification: Performance of FrontEnd - DAE generated: time 7.534e-06/1.746, allocations: 0 / 0.9466 GB, free: 15.2 MB / 0.5578 GB
Notification: Performance of FrontEnd: time 1.552e-06/1.746, allocations: 0 / 0.9466 GB, free: 15.2 MB / 0.5578 GB
Notification: Performance of Transformations before backend: time 0.003115/1.749, allocations: 0 / 0.9466 GB, free: 15.2 MB / 0.5578 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 11424
 * Number of variables: 11424
Notification: Performance of Generate backend data structure: time 0.3605/2.11, allocations: 63.33 MB / 1.008 GB, free: 118.1 MB / 0.5734 GB
Notification: Performance of prepare preOptimizeDAE: time 4.051e-05/2.11, allocations: 9.875 kB / 1.008 GB, free: 118.1 MB / 0.5734 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.06667/2.176, allocations: 19.72 MB / 1.028 GB, free: 114.6 MB / 0.5734 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.06757/2.244, allocations: 34.46 MB / 1.061 GB, free: 100.4 MB / 0.5734 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.005238/2.249, allocations: 9.21 MB / 1.07 GB, free: 92.04 MB / 0.5734 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.02519/2.274, allocations: 4.571 MB / 1.075 GB, free: 90.45 MB / 0.5734 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.1434/2.418, allocations: 52.85 MB / 1.126 GB, free: 48.28 MB / 0.5734 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001421/2.419, allocations: 27 kB / 1.126 GB, free: 48.27 MB / 0.5734 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.01504/2.434, allocations: 1.762 MB / 1.128 GB, free: 46.51 MB / 0.5734 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0004838/2.435, allocations: 1.062 MB / 1.129 GB, free: 45.45 MB / 0.5734 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.09575/2.53, allocations: 50.21 MB / 1.178 GB, free: 11.29 MB / 0.589 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.9326/3.463, allocations: 264.8 MB / 1.437 GB, free: 97.71 MB / 0.6203 GB
Notification: Performance of preOpt comSubExp (simulation): time 1.964/5.427, allocations: 0.9642 GB / 2.401 GB, free: 55.27 MB / 0.6671 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.03509/5.462, allocations: 19.85 MB / 2.42 GB, free: 37.3 MB / 0.6671 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.4956/5.958, allocations: 153 MB / 2.57 GB, free: 116.8 MB / 0.6671 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0002059/5.958, allocations: 335.4 kB / 2.57 GB, free: 116.6 MB / 0.6671 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.05277/6.011, allocations: 26.69 MB / 2.596 GB, free: 109.4 MB / 0.6671 GB
Notification: Performance of pre-optimization done (n=2949): time 0.0001292/6.011, allocations: 5.406 kB / 2.596 GB, free: 109.4 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=3351): time 1.106/7.118, allocations: 190.1 MB / 2.782 GB, free: 155.3 MB / 0.6671 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001758/7.118, allocations: 448.7 kB / 2.782 GB, free: 155.1 MB / 0.6671 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.03302/7.151, allocations: 25.27 MB / 2.807 GB, free: 150.1 MB / 0.6671 GB
Notification: Performance of collectPreVariables (initialization): time 0.009168/7.16, allocations: 0.5656 MB / 2.807 GB, free: 150.1 MB / 0.6671 GB
Notification: Performance of collectInitialEqns (initialization): time 0.01343/7.173, allocations: 23.38 MB / 2.83 GB, free: 141.6 MB / 0.6671 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01803/7.191, allocations: 12.92 MB / 2.843 GB, free: 132.9 MB / 0.6671 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.03299/7.224, allocations: 10.42 MB / 2.853 GB, free: 123.4 MB / 0.6671 GB
Notification: Performance of setup shared object (initialization): time 3.738e-05/7.224, allocations: 486.3 kB / 2.854 GB, free: 122.9 MB / 0.6671 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.01943/7.244, allocations: 9.218 MB / 2.863 GB, free: 113.7 MB / 0.6671 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.02802/7.272, allocations: 29.92 MB / 2.892 GB, free: 76.71 MB / 0.6671 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.049/7.321, allocations: 43.96 MB / 2.935 GB, free: 27.02 MB / 0.6671 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0004355/7.321, allocations: 124 kB / 2.935 GB, free: 26.89 MB / 0.6671 GB
Notification: Performance of matching and sorting (n=5583) (initialization): time 0.811/8.132, allocations: 122.3 MB / 3.054 GB, free: 115.8 MB / 0.6671 GB
Notification: Performance of prepare postOptimizeDAE: time 0.0002348/8.132, allocations: 193.7 kB / 3.054 GB, free: 115.6 MB / 0.6671 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.000507/8.133, allocations: 438.8 kB / 3.055 GB, free: 115.2 MB / 0.6671 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.4976/8.631, allocations: 155.9 MB / 3.207 GB, free: 140.3 MB / 0.6671 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.02745/8.658, allocations: 10.55 MB / 3.217 GB, free: 140.3 MB / 0.6671 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.1902/8.848, allocations: 78.34 MB / 3.294 GB, free: 112.2 MB / 0.6671 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.03756/8.886, allocations: 1.38 MB / 3.295 GB, free: 111.5 MB / 0.6671 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.01308/8.899, allocations: 2.393 MB / 3.298 GB, free: 110.6 MB / 0.6671 GB
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1983
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (5439):
 * Single equations (assignments): 5430
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.03006/8.929, allocations: 2.897 MB / 3.3 GB, free: 109.2 MB / 0.6671 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.02044/8.949, allocations: 4.175 MB / 3.305 GB, free: 108.7 MB / 0.6671 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.3493/9.299, allocations: 79.61 MB / 3.382 GB, free: 32.26 MB / 0.6671 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.000244/9.299, allocations: 360 kB / 3.383 GB, free: 31.91 MB / 0.6671 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0003156/9.299, allocations: 56 kB / 3.383 GB, free: 31.85 MB / 0.6671 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0008803/9.3, allocations: 181.9 kB / 3.383 GB, free: 31.68 MB / 0.6671 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.7018/10, allocations: 137.3 MB / 3.517 GB, free: 126.9 MB / 0.6828 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0002104/10, allocations: 9.094 kB / 3.517 GB, free: 126.9 MB / 0.6828 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.02264/10.02, allocations: 6.767 MB / 3.524 GB, free: 126.8 MB / 0.6828 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.1299/10.15, allocations: 51.7 MB / 3.574 GB, free: 100.4 MB / 0.6828 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.01045/10.16, allocations: 1.396 MB / 3.575 GB, free: 99.41 MB / 0.6828 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.1328/10.3, allocations: 46.48 MB / 3.621 GB, free: 52.72 MB / 0.6828 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 6.963e-06/10.3, allocations: 19.78 kB / 3.621 GB, free: 52.71 MB / 0.6828 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.6727/10.97, allocations: 93.58 MB / 3.712 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.02639/11, allocations: 8.722 MB / 3.721 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.01455/11.01, allocations: 0.8909 MB / 3.722 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.02833/11.04, allocations: 0.7538 MB / 3.722 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.01508/11.05, allocations: 3.884 MB / 3.726 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.008301/11.06, allocations: 1.119 MB / 3.727 GB, free: 117.8 MB / 0.6828 GB
Notification: Performance of sorting global known variables: time 0.02069/11.08, allocations: 13.56 MB / 3.74 GB, free: 116.8 MB / 0.6828 GB
Notification: Performance of sort global known variables: time 1.8e-07/11.08, allocations: 0 / 3.74 GB, free: 116.8 MB / 0.6828 GB
Notification: Performance of remove unused functions: time 0.06332/11.15, allocations: 15.4 MB / 3.755 GB, free: 116.8 MB / 0.6828 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 45
 * Number of states: 180 (pCO2_2000.solution.temperature,pCO2_2000.O2_free.logn,pCO2_2000.H2O.logn,pCO2_2000.relaxed.OxyHm[1].logn,pCO2_2000.relaxed.OxyHm[2].logn,pCO2_2000.relaxed.OxyHm[3].logn,pCO2_2000.relaxed.OxyHm[4].logn,pCO2_2000.relaxed.DeoxyHm[1].logn,pCO2_2000.relaxed.DeoxyHm[2].logn,pCO2_2000.relaxed.DeoxyHm[3].logn,pCO2_2000.relaxed.DeoxyHm[4].logn,pCO2_2000.relaxed.HmAH[1].logn,pCO2_2000.relaxed.HmAH[2].logn,pCO2_2000.relaxed.HmAH[3].logn,pCO2_2000.relaxed.HmAH[4].logn,pCO2_2000.relaxed.HmA[1].logn,pCO2_2000.relaxed.HmA[2].logn,pCO2_2000.relaxed.HmA[3].logn,pCO2_2000.relaxed.HmA[4].logn,pCO2_2000.relaxed.HmNH3[1].logn,pCO2_2000.relaxed.HmNH3[2].logn,pCO2_2000.relaxed.HmNH3[3].logn,pCO2_2000.relaxed.HmNH3[4].logn,pCO2_2000.relaxed.HmNH2[1].logn,pCO2_2000.relaxed.HmNH2[2].logn,pCO2_2000.relaxed.HmNH2[3].logn,pCO2_2000.relaxed.HmNH2[4].logn,pCO2_2000.relaxed.HmNHCOO[1].logn,pCO2_2000.relaxed.HmNHCOO[2].logn,pCO2_2000.relaxed.HmNHCOO[3].logn,pCO2_2000.relaxed.HmNHCOO[4].logn,pCO2_2000.tensed.OxyHm[1].logn,pCO2_2000.tensed.OxyHm[2].logn,pCO2_2000.tensed.OxyHm[3].logn,pCO2_2000.tensed.OxyHm[4].logn,pCO2_2000.tensed.DeoxyHm[1].logn,pCO2_2000.tensed.DeoxyHm[2].logn,pCO2_2000.tensed.DeoxyHm[3].logn,pCO2_2000.tensed.DeoxyHm[4].logn,pCO2_2000.tensed.HmAH[1].logn,pCO2_2000.tensed.HmAH[2].logn,pCO2_2000.tensed.HmAH[3].logn,pCO2_2000.tensed.HmAH[4].logn,pCO2_2000.tensed.HmA[1].logn,pCO2_2000.tensed.HmA[2].logn,pCO2_2000.tensed.HmA[3].logn,pCO2_2000.tensed.HmA[4].logn,pCO2_2000.tensed.HmNH3[1].logn,pCO2_2000.tensed.HmNH3[2].logn,pCO2_2000.tensed.HmNH3[3].logn,pCO2_2000.tensed.HmNH3[4].logn,pCO2_2000.tensed.HmNH2[1].logn,pCO2_2000.tensed.HmNH2[2].logn,pCO2_2000.tensed.HmNH2[3].logn,pCO2_2000.tensed.HmNH2[4].logn,pCO2_2000.tensed.HmNHCOO[1].logn,pCO2_2000.tensed.HmNHCOO[2].logn,pCO2_2000.tensed.HmNHCOO[3].logn,pCO2_2000.tensed.HmNHCOO[4].logn,pCO2_2000.CO2_free.logn,pCO2_5330.solution.temperature,pCO2_5330.O2_free.logn,pCO2_5330.H2O.logn,pCO2_5330.relaxed.OxyHm[1].logn,pCO2_5330.relaxed.OxyHm[2].logn,pCO2_5330.relaxed.OxyHm[3].logn,pCO2_5330.relaxed.OxyHm[4].logn,pCO2_5330.relaxed.DeoxyHm[1].logn,pCO2_5330.relaxed.DeoxyHm[2].logn,pCO2_5330.relaxed.DeoxyHm[3].logn,pCO2_5330.relaxed.DeoxyHm[4].logn,pCO2_5330.relaxed.HmAH[1].logn,pCO2_5330.relaxed.HmAH[2].logn,pCO2_5330.relaxed.HmAH[3].logn,pCO2_5330.relaxed.HmAH[4].logn,pCO2_5330.relaxed.HmA[1].logn,pCO2_5330.relaxed.HmA[2].logn,pCO2_5330.relaxed.HmA[3].logn,pCO2_5330.relaxed.HmA[4].logn,pCO2_5330.relaxed.HmNH3[1].logn,pCO2_5330.relaxed.HmNH3[2].logn,pCO2_5330.relaxed.HmNH3[3].logn,pCO2_5330.relaxed.HmNH3[4].logn,pCO2_5330.relaxed.HmNH2[1].logn,pCO2_5330.relaxed.HmNH2[2].logn,pCO2_5330.relaxed.HmNH2[3].logn,pCO2_5330.relaxed.HmNH2[4].logn,pCO2_5330.relaxed.HmNHCOO[1].logn,pCO2_5330.relaxed.HmNHCOO[2].logn,pCO2_5330.relaxed.HmNHCOO[3].logn,pCO2_5330.relaxed.HmNHCOO[4].logn,pCO2_5330.tensed.OxyHm[1].logn,pCO2_5330.tensed.OxyHm[2].logn,pCO2_5330.tensed.OxyHm[3].logn,pCO2_5330.tensed.OxyHm[4].logn,pCO2_5330.tensed.DeoxyHm[1].logn,pCO2_5330.tensed.DeoxyHm[2].logn,pCO2_5330.tensed.DeoxyHm[3].logn,pCO2_5330.tensed.DeoxyHm[4].logn,pCO2_5330.tensed.HmAH[1].logn,pCO2_5330.tensed.HmAH[2].logn,pCO2_5330.tensed.HmAH[3].logn,pCO2_5330.tensed.HmAH[4].logn,pCO2_5330.tensed.HmA[1].logn,pCO2_5330.tensed.HmA[2].logn,pCO2_5330.tensed.HmA[3].logn,pCO2_5330.tensed.HmA[4].logn,pCO2_5330.tensed.HmNH3[1].logn,pCO2_5330.tensed.HmNH3[2].logn,pCO2_5330.tensed.HmNH3[3].logn,pCO2_5330.tensed.HmNH3[4].logn,pCO2_5330.tensed.HmNH2[1].logn,pCO2_5330.tensed.HmNH2[2].logn,pCO2_5330.tensed.HmNH2[3].logn,pCO2_5330.tensed.HmNH2[4].logn,pCO2_5330.tensed.HmNHCOO[1].logn,pCO2_5330.tensed.HmNHCOO[2].logn,pCO2_5330.tensed.HmNHCOO[3].logn,pCO2_5330.tensed.HmNHCOO[4].logn,pCO2_5330.CO2_free.logn,pCO2_9330.solution.temperature,pCO2_9330.O2_free.logn,pCO2_9330.H2O.logn,pCO2_9330.relaxed.OxyHm[1].logn,pCO2_9330.relaxed.OxyHm[2].logn,pCO2_9330.relaxed.OxyHm[3].logn,pCO2_9330.relaxed.OxyHm[4].logn,pCO2_9330.relaxed.DeoxyHm[1].logn,pCO2_9330.relaxed.DeoxyHm[2].logn,pCO2_9330.relaxed.DeoxyHm[3].logn,pCO2_9330.relaxed.DeoxyHm[4].logn,pCO2_9330.relaxed.HmAH[1].logn,pCO2_9330.relaxed.HmAH[2].logn,pCO2_9330.relaxed.HmAH[3].logn,pCO2_9330.relaxed.HmAH[4].logn,pCO2_9330.relaxed.HmA[1].logn,pCO2_9330.relaxed.HmA[2].logn,pCO2_9330.relaxed.HmA[3].logn,pCO2_9330.relaxed.HmA[4].logn,pCO2_9330.relaxed.HmNH3[1].logn,pCO2_9330.relaxed.HmNH3[2].logn,pCO2_9330.relaxed.HmNH3[3].logn,pCO2_9330.relaxed.HmNH3[4].logn,pCO2_9330.relaxed.HmNH2[1].logn,pCO2_9330.relaxed.HmNH2[2].logn,pCO2_9330.relaxed.HmNH2[3].logn,pCO2_9330.relaxed.HmNH2[4].logn,pCO2_9330.relaxed.HmNHCOO[1].logn,pCO2_9330.relaxed.HmNHCOO[2].logn,pCO2_9330.relaxed.HmNHCOO[3].logn,pCO2_9330.relaxed.HmNHCOO[4].logn,pCO2_9330.tensed.OxyHm[1].logn,pCO2_9330.tensed.OxyHm[2].logn,pCO2_9330.tensed.OxyHm[3].logn,pCO2_9330.tensed.OxyHm[4].logn,pCO2_9330.tensed.DeoxyHm[1].logn,pCO2_9330.tensed.DeoxyHm[2].logn,pCO2_9330.tensed.DeoxyHm[3].logn,pCO2_9330.tensed.DeoxyHm[4].logn,pCO2_9330.tensed.HmAH[1].logn,pCO2_9330.tensed.HmAH[2].logn,pCO2_9330.tensed.HmAH[3].logn,pCO2_9330.tensed.HmAH[4].logn,pCO2_9330.tensed.HmA[1].logn,pCO2_9330.tensed.HmA[2].logn,pCO2_9330.tensed.HmA[3].logn,pCO2_9330.tensed.HmA[4].logn,pCO2_9330.tensed.HmNH3[1].logn,pCO2_9330.tensed.HmNH3[2].logn,pCO2_9330.tensed.HmNH3[3].logn,pCO2_9330.tensed.HmNH3[4].logn,pCO2_9330.tensed.HmNH2[1].logn,pCO2_9330.tensed.HmNH2[2].logn,pCO2_9330.tensed.HmNH2[3].logn,pCO2_9330.tensed.HmNH2[4].logn,pCO2_9330.tensed.HmNHCOO[1].logn,pCO2_9330.tensed.HmNHCOO[2].logn,pCO2_9330.tensed.HmNHCOO[3].logn,pCO2_9330.tensed.HmNHCOO[4].logn,pCO2_9330.CO2_free.logn)
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (3666):
 * Single equations (assignments): 3657
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 9
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 6 systems
   {(1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%), (1,3,100.0%), (33,10,82.4%)}
 * Non-linear torn systems (#iteration vars, #inner vars): 3 systems
   {(1,3), (1,3), (1,3)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.01429/11.16, allocations: 3.529 MB / 3.759 GB, free: 116.7 MB / 0.6828 GB
Notification: Performance of simCode: created initialization part: time 0.1047/11.27, allocations: 35.78 MB / 3.794 GB, free: 101.1 MB / 0.6828 GB
Notification: Performance of simCode: created event and clocks part: time 1.571e-05/11.27, allocations: 1.562 kB / 3.794 GB, free: 101.1 MB / 0.6828 GB
Notification: Performance of simCode: created simulation system equations: time 0.06097/11.33, allocations: 19.53 MB / 3.813 GB, free: 86.6 MB / 0.6828 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.04511/11.37, allocations: 8.184 MB / 3.821 GB, free: 82.43 MB / 0.6828 GB
Error: Error parsing unit kDa: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.175/11.55, allocations: 90.23 MB / 3.909 GB, free: 3.043 MB / 0.6828 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.3057/11.85, allocations: 13.91 MB / 3.923 GB, free: 128.5 MB / 0.6984 GB
Notification: Performance of simCode: alias equations: time 0.03353/11.89, allocations: 5.143 MB / 3.928 GB, free: 128 MB / 0.6984 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.04404/11.93, allocations: 8.677 MB / 3.936 GB, free: 127.9 MB / 0.6984 GB
Notification: Performance of SimCode: time 1.753e-06/11.93, allocations: 3.594 kB / 3.936 GB, free: 127.9 MB / 0.6984 GB
Notification: Performance of Templates: time 1.779/13.71, allocations: 0.9732 GB / 4.909 GB, free: 24.21 MB / 0.7296 GB
"
[Timeout remaining time 646]
make -j1 -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.makefile [Timeout 660]
(rm -f Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; mkfifo Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe ; head -c 1048576 < Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe >> ../files/Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.sim & ./Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57 -abortSlowSimulation -alarm=240  -lv LOG_STATS > Chemical_Chemical.Obsolete.Examples.Hemoglobin.Joels57.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 35.51444167783484]