Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001355/0.001355, allocations: 81.08 kB / 19.87 MB, free: 4.621 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001401/0.001401, allocations: 169 kB / 23.27 MB, free: 1.219 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9743/0.9743, allocations: 177.1 MB / 203.7 MB, free: 5.508 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo): time 0.07869/0.07869, allocations: 12.76 MB / 273 MB, free: 120 kB / 250.7 MB
"
[Timeout remaining time 180]
Using package Bodylight with version 1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments")
translateModel(Bodylight.Chemical.Examples.TwoConcentrationCompartments,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.432e-06/1.432e-06, allocations: 0 / 347.1 MB, free: 0.9805 MB / 266.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 9.628e-06/1.106e-05, allocations: 6.25 kB / 347.1 MB, free: 0.9727 MB / 266.7 MB
Notification: Performance of NFInst.instantiate(Bodylight.Chemical.Examples.TwoConcentrationCompartments): time 0.005359/0.00537, allocations: 3.746 MB / 350.9 MB, free: 13.21 MB / 282.7 MB
Notification: Performance of NFInst.instExpressions: time 0.003351/0.008721, allocations: 3.01 MB / 353.9 MB, free: 10.19 MB / 282.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.000164/0.008885, allocations: 19.81 kB / 353.9 MB, free: 10.17 MB / 282.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.0001635/0.009049, allocations: 71.28 kB / 354 MB, free: 10.1 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:6207:6-6223:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit' contains a call to impure function 'Modelica.Utilities.Streams.print'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5637:15-5729:17:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.readReal' contains a call to impure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.UnitConversions.findUnit'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Hydraulic.mo:1482:17-1484:29:writable] Warning: In relation resistor.Resistance == 0.0, == on Real operands is deprecated in non-function contexts.
Notification: Performance of NFTyping.typeBindings: time 0.00095/0.009999, allocations: 497 kB / 354.5 MB, free: 9.609 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5783:15-5804:18:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeReal' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Bodylight 1.1.0/Types.mo:5845:15-5881:24:writable] Warning: Pure function 'Bodylight.Chemical.Examples.TwoConcentrationCompartments.substance1.Utilities.writeComparison' contains a call to impure function 'Modelica.Utilities.Files.createDirectory'.
Notification: Performance of NFTyping.typeClassSections: time 0.0008485/0.01085, allocations: 0.5277 MB / 355 MB, free: 9.082 MB / 282.7 MB
Notification: Performance of NFFlatten.flatten: time 0.003083/0.01393, allocations: 5.108 MB / 360.1 MB, free: 3.965 MB / 282.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.0001563/0.01409, allocations: 74.55 kB / 360.2 MB, free: 3.887 MB / 282.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.002439/0.01653, allocations: 1.912 MB / 362.1 MB, free: 1.973 MB / 282.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002154/0.01868, allocations: 1.682 MB / 363.8 MB, free: 296 kB / 282.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0005645/0.01924, allocations: 288 kB / 364.1 MB, free: 8 kB / 282.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.0003618/0.01961, allocations: 292 kB / 364.3 MB, free: 15.72 MB / 298.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.0006429/0.02025, allocations: 0.9882 MB / 365.3 MB, free: 14.73 MB / 298.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.0006593/0.02091, allocations: 0.9358 MB / 366.3 MB, free: 13.79 MB / 298.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.001694/0.0226, allocations: 2.627 MB / 368.9 MB, free: 11.16 MB / 298.7 MB
Notification: Performance of FrontEnd - DAE generated: time 2.876e-06/0.0226, allocations: 0 / 368.9 MB, free: 11.16 MB / 298.7 MB
Notification: Performance of FrontEnd: time 1.382e-06/0.02261, allocations: 0 / 368.9 MB, free: 11.16 MB / 298.7 MB
Notification: Performance of Transformations before backend: time 8.597e-06/0.02261, allocations: 3.938 kB / 368.9 MB, free: 11.16 MB / 298.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 164
 * Number of variables: 164
Notification: Performance of Generate backend data structure: time 0.006608/0.02922, allocations: 3.637 MB / 372.5 MB, free: 7.473 MB / 298.7 MB
Notification: Performance of prepare preOptimizeDAE: time 4.18e-05/0.02926, allocations: 11.98 kB / 372.5 MB, free: 7.461 MB / 298.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0006057/0.02987, allocations: 264.3 kB / 372.8 MB, free: 7.203 MB / 298.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.0009787/0.03085, allocations: 0.7939 MB / 373.6 MB, free: 6.375 MB / 298.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.001212/0.03206, allocations: 2.82 MB / 376.4 MB, free: 2.914 MB / 298.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0003212/0.03238, allocations: 152.1 kB / 376.6 MB, free: 2.766 MB / 298.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.001778/0.03416, allocations: 1.416 MB / 378 MB, free: 1.32 MB / 298.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 1.917e-05/0.03418, allocations: 0 / 378 MB, free: 1.32 MB / 298.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001839/0.03436, allocations: 28 kB / 378 MB, free: 1.293 MB / 298.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.587e-05/0.03438, allocations: 16 kB / 378 MB, free: 1.277 MB / 298.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0009683/0.03535, allocations: 0.6985 MB / 378.7 MB, free: 0.5781 MB / 298.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.009254/0.0446, allocations: 5.406 MB / 384.1 MB, free: 11.11 MB / 314.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.0009942/0.0456, allocations: 0.818 MB / 384.9 MB, free: 10.27 MB / 314.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.0008749/0.04647, allocations: 0.7442 MB / 385.7 MB, free: 9.512 MB / 314.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.0002528/0.04672, allocations: 24.94 kB / 385.7 MB, free: 9.484 MB / 314.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.001225/0.04795, allocations: 1.294 MB / 387 MB, free: 8.156 MB / 314.7 MB
Notification: Performance of pre-optimization done (n=123): time 2.305e-06/0.04795, allocations: 3.938 kB / 387 MB, free: 8.152 MB / 314.7 MB
Notification: Performance of matching and sorting (n=123): time 0.0033/0.05125, allocations: 2.295 MB / 389.3 MB, free: 5.852 MB / 314.7 MB
Notification: Performance of inlineWhenForInitialization (initialization): time 4.125e-05/0.05129, allocations: 98.03 kB / 389.4 MB, free: 5.734 MB / 314.7 MB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.0003556/0.05165, allocations: 0.6124 MB / 390 MB, free: 5.105 MB / 314.7 MB
Notification: Performance of collectPreVariables (initialization): time 0.0001769/0.05182, allocations: 61.7 kB / 390.1 MB, free: 5.039 MB / 314.7 MB
Notification: Performance of collectInitialEqns (initialization): time 0.0004488/0.05227, allocations: 409.2 kB / 390.5 MB, free: 4.633 MB / 314.7 MB
Notification: Performance of collectInitialBindings (initialization): time 0.0004037/0.05268, allocations: 0.5851 MB / 391.1 MB, free: 4.043 MB / 314.7 MB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.0006049/0.05328, allocations: 369 kB / 391.4 MB, free: 3.672 MB / 314.7 MB
Notification: Performance of setup shared object (initialization): time 0.0001278/0.05341, allocations: 0.5432 MB / 392 MB, free: 3.121 MB / 314.7 MB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0008701/0.05428, allocations: 0.6732 MB / 392.6 MB, free: 2.441 MB / 314.7 MB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.0009657/0.05525, allocations: 0.8762 MB / 393.5 MB, free: 1.543 MB / 314.7 MB
Notification: Performance of analyzeInitialSystem (initialization): time 0.002799/0.05804, allocations: 2.224 MB / 395.7 MB, free: 15.29 MB / 330.7 MB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 3.897e-06/0.05805, allocations: 4 kB / 395.7 MB, free: 15.28 MB / 330.7 MB
Notification: Performance of matching and sorting (n=237) (initialization): time 0.003051/0.0611, allocations: 2 MB / 397.7 MB, free: 13.26 MB / 330.7 MB
Notification: Performance of prepare postOptimizeDAE: time 2.941e-05/0.06113, allocations: 33.7 kB / 397.8 MB, free: 13.22 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 7.213e-06/0.06114, allocations: 0 / 397.8 MB, free: 13.22 MB / 330.7 MB
Notification: Performance of postOpt tearingSystem (initialization): time 1.609e-05/0.06115, allocations: 8 kB / 397.8 MB, free: 13.21 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.03293/0.09408, allocations: 4.134 MB / 401.9 MB, free: 9.078 MB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 3.978e-05/0.09412, allocations: 8 kB / 401.9 MB, free: 9.07 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.002043/0.09616, allocations: 246.8 kB / 402.2 MB, free: 8.828 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.000157/0.09632, allocations: 47.98 kB / 402.2 MB, free: 8.781 MB / 330.7 MB
Warning: Assuming fixed start value for the following 1 variables:
         inertia.q_in.q:VARIABLE(flow=true start = advectionStream.SolutionFlow unit = \"m3/s\" fixed = true nominal = 1.6666666666666667e-8 )  \"Volume flow\" type: Real
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 6
 * Number of states: 0 ()
 * Number of discrete variables: 5 (pulse.count,$PRE.pulse.count,pulse.T_start,$PRE.pulse.T_start,$whenCondition1)
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (236):
 * Single equations (assignments): 235
 * Array equations: 0
 * Algorithm blocks: 1
 * Record equations: 0
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of prepare postOptimizeDAE: time 0.0006179/0.09694, allocations: 248.2 kB / 402.5 MB, free: 8.527 MB / 330.7 MB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0003995/0.09734, allocations: 135.3 kB / 402.6 MB, free: 8.395 MB / 330.7 MB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.002553/0.09989, allocations: 1.985 MB / 404.6 MB, free: 6.398 MB / 330.7 MB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 9.258e-06/0.0999, allocations: 12 kB / 404.6 MB, free: 6.387 MB / 330.7 MB
Notification: Performance of postOpt constantLinearSystem (simulation): time 2.394e-06/0.0999, allocations: 0 / 404.6 MB, free: 6.387 MB / 330.7 MB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 9.337e-06/0.09991, allocations: 7.969 kB / 404.6 MB, free: 6.379 MB / 330.7 MB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.002488/0.1024, allocations: 1.964 MB / 406.6 MB, free: 4.371 MB / 330.7 MB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 4.889e-06/0.1024, allocations: 7.938 kB / 406.6 MB, free: 4.363 MB / 330.7 MB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0356/0.138, allocations: 4.067 MB / 410.6 MB, free: 300 kB / 330.7 MB
Notification: Performance of postOpt tearingSystem (simulation): time 2.309e-05/0.138, allocations: 8 kB / 410.6 MB, free: 292 kB / 330.7 MB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.0007325/0.1388, allocations: 79.86 kB / 410.7 MB, free: 212 kB / 330.7 MB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 6.563e-06/0.1388, allocations: 4 kB / 410.7 MB, free: 208 kB / 330.7 MB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 1.563e-06/0.1388, allocations: 4 kB / 410.7 MB, free: 204 kB / 330.7 MB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.1358/0.2746, allocations: 2.568 MB / 413.3 MB, free: 66.05 MB / 330.7 MB
Notification: Performance of postOpt removeConstants (simulation): time 0.0008406/0.2755, allocations: 395.6 kB / 413.7 MB, free: 66.02 MB / 330.7 MB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.00038/0.2758, allocations: 77.81 kB / 413.8 MB, free: 66.02 MB / 330.7 MB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.002064/0.2779, allocations: 138.7 kB / 413.9 MB, free: 66.02 MB / 330.7 MB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0005104/0.2784, allocations: 136.4 kB / 414 MB, free: 66.02 MB / 330.7 MB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0002138/0.2786, allocations: 32.75 kB / 414.1 MB, free: 66.02 MB / 330.7 MB
Notification: Performance of sorting global known variables: time 0.0002984/0.2789, allocations: 357 kB / 414.4 MB, free: 65.88 MB / 330.7 MB
Notification: Performance of sort global known variables: time 9e-08/0.2789, allocations: 0 / 414.4 MB, free: 65.88 MB / 330.7 MB
Notification: Performance of remove unused functions: time 0.001443/0.2804, allocations: 0.6079 MB / 415 MB, free: 65.87 MB / 330.7 MB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 2
 * Number of states: 103 (substance.state,substance1.state,advectionStream.c[2],advectionStream.c[3],advectionStream.c[4],advectionStream.c[5],advectionStream.c[6],advectionStream.c[7],advectionStream.c[8],advectionStream.c[9],advectionStream.c[10],advectionStream.c[11],advectionStream.c[12],advectionStream.c[13],advectionStream.c[14],advectionStream.c[15],advectionStream.c[16],advectionStream.c[17],advectionStream.c[18],advectionStream.c[19],advectionStream.c[20],advectionStream.c[21],advectionStream.c[22],advectionStream.c[23],advectionStream.c[24],advectionStream.c[25],advectionStream.c[26],advectionStream.c[27],advectionStream.c[28],advectionStream.c[29],advectionStream.c[30],advectionStream.c[31],advectionStream.c[32],advectionStream.c[33],advectionStream.c[34],advectionStream.c[35],advectionStream.c[36],advectionStream.c[37],advectionStream.c[38],advectionStream.c[39],advectionStream.c[40],advectionStream.c[41],advectionStream.c[42],advectionStream.c[43],advectionStream.c[44],advectionStream.c[45],advectionStream.c[46],advectionStream.c[47],advectionStream.c[48],advectionStream.c[49],advectionStream.c[50],advectionStream.c[51],advectionStream.c[52],advectionStream.c[53],advectionStream.c[54],advectionStream.c[55],advectionStream.c[56],advectionStream.c[57],advectionStream.c[58],advectionStream.c[59],advectionStream.c[60],advectionStream.c[61],advectionStream.c[62],advectionStream.c[63],advectionStream.c[64],advectionStream.c[65],advectionStream.c[66],advectionStream.c[67],advectionStream.c[68],advectionStream.c[69],advectionStream.c[70],advectionStream.c[71],advectionStream.c[72],advectionStream.c[73],advectionStream.c[74],advectionStream.c[75],advectionStream.c[76],advectionStream.c[77],advectionStream.c[78],advectionStream.c[79],advectionStream.c[80],advectionStream.c[81],advectionStream.c[82],advectionStream.c[83],advectionStream.c[84],advectionStream.c[85],advectionStream.c[86],advectionStream.c[87],advectionStream.c[88],advectionStream.c[89],advectionStream.c[90],advectionStream.c[91],advectionStream.c[92],advectionStream.c[93],advectionStream.c[94],advectionStream.c[95],advectionStream.c[96],advectionStream.c[97],advectionStream.c[98],advectionStream.c[99],elasticVessel.volume,elasticVessel1.volume,inertia.q_in.q)
 * Number of discrete variables: 3 ($whenCondition1,pulse.T_start,pulse.count)
 * Number of discrete states: 1 (pulse.count)
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (123):
 * Single equations (assignments): 121
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 0
 * When equations: 2
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 0
 * Mixed (continuous/discrete) equation systems: 0
Notification: Performance of Backend phase and start with SimCode phase: time 0.0003803/0.2807, allocations: 204 kB / 415.2 MB, free: 65.77 MB / 330.7 MB
Notification: Performance of simCode: created initialization part: time 0.003554/0.2843, allocations: 1.745 MB / 417 MB, free: 65.64 MB / 330.7 MB
Notification: Performance of simCode: created event and clocks part: time 4.479e-06/0.2843, allocations: 3.75 kB / 417 MB, free: 65.64 MB / 330.7 MB
Notification: Performance of simCode: created simulation system equations: time 0.001505/0.2858, allocations: 0.8558 MB / 417.8 MB, free: 65.62 MB / 330.7 MB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.001667/0.2875, allocations: 0.5607 MB / 418.4 MB, free: 65.58 MB / 330.7 MB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/mol: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.008054/0.2955, allocations: 6.269 MB / 424.6 MB, free: 63.12 MB / 330.7 MB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001893/0.2957, allocations: 267.9 kB / 424.9 MB, free: 63.04 MB / 330.7 MB
Notification: Performance of simCode: alias equations: time 0.002857/0.2986, allocations: 338.8 kB / 425.2 MB, free: 62.81 MB / 330.7 MB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.00239/0.301, allocations: 0.5708 MB / 425.8 MB, free: 62.74 MB / 330.7 MB
Notification: Performance of SimCode: time 1.393e-06/0.301, allocations: 0 / 425.8 MB, free: 62.74 MB / 330.7 MB
Notification: Performance of Templates: time 0.03933/0.3403, allocations: 46.39 MB / 472.2 MB, free: 19.51 MB / 330.7 MB
"
[Timeout remaining time 660]
make -j1 -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.makefile [Timeout 660]
(rm -f Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; mkfifo Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe ; head -c 1048576 < Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe >> ../files/Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.sim & ./Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments -abortSlowSimulation -alarm=240  -lv LOG_STATS > Bodylight_Bodylight.Chemical.Examples.TwoConcentrationCompartments.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 4.13903980422765]