Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo): time 0.06192/0.06192, allocations: 11.16 MB / 30.72 MB, free: 4.488 MB / 24.77 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.001004/0.001004, allocations: 107 kB / 38.41 MB, free: 7.023 MB / 33.03 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001426/0.001426, allocations: 168.5 kB / 46.18 MB, free: 10.35 MB / 44.04 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9471/0.9471, allocations: 177.2 MB / 231 MB, free: 4.781 MB / 202.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo): time 0.1003/0.1003, allocations: 17.62 MB / 309.5 MB, free: 12.65 MB / 282.7 MB
"
[Timeout remaining time 180]
Using package Physiolibrary with version 3.0.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Physiolibrary 3.0.0/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Using package Chemical with version 1.4.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical 1.4.1/package.mo)
Running command: translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary")
translateModel(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 2.514e-06/2.514e-06, allocations: 0 / 391.3 MB, free: 28.79 MB / 314.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.838e-05/3.09e-05, allocations: 4.984 kB / 391.3 MB, free: 28.79 MB / 314.7 MB
Notification: Performance of NFInst.instantiate(Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary): time 0.04714/0.04717, allocations: 71.26 MB / 462.6 MB, free: 5.281 MB / 362.7 MB
Notification: Performance of NFInst.instExpressions: time 0.03553/0.0827, allocations: 23.09 MB / 485.6 MB, free: 14.12 MB / 394.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.008279/0.09098, allocations: 151.2 kB / 485.8 MB, free: 13.97 MB / 394.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.006382/0.09736, allocations: 1.786 MB / 487.6 MB, free: 12.17 MB / 394.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.0187/0.1161, allocations: 7.281 MB / 494.9 MB, free: 4.84 MB / 394.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.01421/0.1303, allocations: 7.836 MB / 0.4909 GB, free: 12.98 MB / 410.7 MB
Notification: Performance of NFFlatten.flatten: time 0.206/0.3363, allocations: 22.56 MB / 0.5129 GB, free: 29.34 MB / 410.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.02958/0.3659, allocations: 23.35 MB / 0.5357 GB, free: 27.3 MB / 410.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.1682/0.5341, allocations: 79.28 MB / 0.6132 GB, free: 5.113 MB / 442.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.6828/1.217, allocations: 207.7 MB / 0.816 GB, free: 27.36 MB / 0.4948 GB
Notification: Performance of NFPackage.collectConstants: time 0.01119/1.228, allocations: 3.965 MB / 0.8198 GB, free: 23.4 MB / 0.4948 GB
Notification: Performance of NFFlatten.collectFunctions: time 0.5224/1.751, allocations: 128.9 MB / 0.9457 GB, free: 111.1 MB / 0.5261 GB
Notification: Performance of NFScalarize.scalarize: time 0.02038/1.771, allocations: 20.43 MB / 0.9657 GB, free: 110.7 MB / 0.5261 GB
Notification: Performance of NFVerifyModel.verify: time 0.03094/1.802, allocations: 16.88 MB / 0.9822 GB, free: 98.04 MB / 0.5261 GB
Notification: Performance of NFConvertDAE.convert: time 0.05858/1.86, allocations: 46 MB / 1.027 GB, free: 55.21 MB / 0.5261 GB
Notification: Performance of FrontEnd - DAE generated: time 6.723e-06/1.86, allocations: 0 / 1.027 GB, free: 55.21 MB / 0.5261 GB
Notification: Performance of FrontEnd: time 1.633e-06/1.86, allocations: 4 kB / 1.027 GB, free: 55.21 MB / 0.5261 GB
Notification: Performance of Transformations before backend: time 0.001544/1.862, allocations: 0 / 1.027 GB, free: 55.21 MB / 0.5261 GB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 8166
 * Number of variables: 8166
Notification: Performance of Generate backend data structure: time 0.06698/1.929, allocations: 37.23 MB / 1.063 GB, free: 17.82 MB / 0.5261 GB
Notification: Performance of prepare preOptimizeDAE: time 5.421e-05/1.929, allocations: 12.03 kB / 1.063 GB, free: 17.81 MB / 0.5261 GB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.02212/1.951, allocations: 6.932 MB / 1.07 GB, free: 10.86 MB / 0.5261 GB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.3878/2.339, allocations: 15.25 MB / 1.085 GB, free: 119.4 MB / 0.5262 GB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.002252/2.341, allocations: 2.683 MB / 1.088 GB, free: 119.4 MB / 0.5262 GB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.009444/2.351, allocations: 2.781 MB / 1.09 GB, free: 119.4 MB / 0.5262 GB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.09612/2.447, allocations: 39.84 MB / 1.129 GB, free: 111.7 MB / 0.5262 GB
Notification: Performance of preOpt findStateOrder (simulation): time 0.001632/2.448, allocations: 106.1 kB / 1.129 GB, free: 111.7 MB / 0.5262 GB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.009167/2.458, allocations: 1.129 MB / 1.131 GB, free: 111.7 MB / 0.5262 GB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.001217/2.459, allocations: 1.602 MB / 1.132 GB, free: 111.7 MB / 0.5262 GB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.07427/2.533, allocations: 34.78 MB / 1.166 GB, free: 86.73 MB / 0.5262 GB
Warning: The model contains alias variables with redundant start and/or conflicting nominal values. It is recommended to resolve the conflicts, because otherwise the system could be hard to solve. To print the conflicting alias sets and the chosen candidates please use -d=aliasConflicts.
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.6448/3.178, allocations: 227.9 MB / 1.389 GB, free: 77.89 MB / 0.5575 GB
Notification: Performance of preOpt comSubExp (simulation): time 0.0321/3.21, allocations: 22.24 MB / 1.41 GB, free: 72.86 MB / 0.5575 GB
Notification: Performance of preOpt resolveLoops (simulation): time 0.02374/3.234, allocations: 14.4 MB / 1.424 GB, free: 67.73 MB / 0.5575 GB
Notification: Performance of preOpt evalFunc (simulation): time 0.5217/3.755, allocations: 81.99 MB / 1.505 GB, free: 187.2 MB / 0.5578 GB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0001884/3.756, allocations: 271.5 kB / 1.505 GB, free: 187.2 MB / 0.5578 GB
Notification: Performance of preOpt simplifyInStream (simulation): time 0.02337/3.779, allocations: 6.804 MB / 1.511 GB, free: 187.2 MB / 0.5578 GB
Notification: Performance of pre-optimization done (n=3091): time 0.000116/3.779, allocations: 0 / 1.511 GB, free: 187.2 MB / 0.5578 GB
Notification: Performance of matching and sorting (n=3091): time 0.1555/3.935, allocations: 64.26 MB / 1.574 GB, free: 154.3 MB / 0.5578 GB
Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001458/3.935, allocations: 285.1 kB / 1.574 GB, free: 154 MB / 0.5578 GB
Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.01585/3.951, allocations: 12.55 MB / 1.587 GB, free: 142.6 MB / 0.5578 GB
Notification: Performance of collectPreVariables (initialization): time 0.006386/3.957, allocations: 429.3 kB / 1.587 GB, free: 142.2 MB / 0.5578 GB
Notification: Performance of collectInitialEqns (initialization): time 0.007522/3.965, allocations: 12.4 MB / 1.599 GB, free: 131.5 MB / 0.5578 GB
Notification: Performance of collectInitialBindings (initialization): time 0.01588/3.98, allocations: 11.72 MB / 1.611 GB, free: 120.5 MB / 0.5578 GB
Notification: Performance of simplifyInitialFunctions (initialization): time 0.02893/4.009, allocations: 8.094 MB / 1.619 GB, free: 112.4 MB / 0.5578 GB
Notification: Performance of setup shared object (initialization): time 6.385e-05/4.009, allocations: 480.2 kB / 1.619 GB, free: 111.9 MB / 0.5578 GB
Notification: Performance of preBalanceInitialSystem (initialization): time 0.0265/4.036, allocations: 12.55 MB / 1.631 GB, free: 99.38 MB / 0.5578 GB
Notification: Performance of partitionIndependentBlocks (initialization): time 0.04143/4.077, allocations: 29.05 MB / 1.66 GB, free: 63.91 MB / 0.5578 GB
Notification: Performance of analyzeInitialSystem (initialization): time 0.3437/4.421, allocations: 63.08 MB / 1.721 GB, free: 148.7 MB / 0.5578 GB
Notification: Performance of solveInitialSystemEqSystem (initialization): time 0.0006617/4.422, allocations: 97.97 kB / 1.721 GB, free: 148.7 MB / 0.5578 GB
Notification: Performance of matching and sorting (n=4958) (initialization): time 0.1412/4.563, allocations: 51.2 MB / 1.771 GB, free: 110.2 MB / 0.5578 GB
Notification: Performance of prepare postOptimizeDAE: time 0.000316/4.563, allocations: 156.2 kB / 1.772 GB, free: 110 MB / 0.5578 GB
Notification: Performance of postOpt simplifyComplexFunction (initialization): time 0.0006107/4.564, allocations: 344 kB / 1.772 GB, free: 109.7 MB / 0.5578 GB
Notification: Performance of postOpt tearingSystem (initialization): time 0.09621/4.66, allocations: 16.53 MB / 1.788 GB, free: 97.12 MB / 0.5578 GB
Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.02471/4.685, allocations: 8.163 MB / 1.796 GB, free: 88.94 MB / 0.5578 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 0.009956/4.695, allocations: 17.54 MB / 1.813 GB, free: 70.86 MB / 0.5578 GB
Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.02342/4.718, allocations: 2.224 MB / 1.815 GB, free: 68.7 MB / 0.5578 GB
Notification: Performance of postOpt collapseArrayExpressions (initialization): time 0.008444/4.726, allocations: 2.475 MB / 1.818 GB, free: 66.22 MB / 0.5578 GB
Warning: Assuming fixed start value for the following 18 variables:
         pulmonaryArteries.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryArteries.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryArteries.tm_start * pulmonaryArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[1]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[2]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         pulmonaryVeins.extraSubstanceAmounts[3]:VARIABLE(start = pulmonaryVeins.tm_start * pulmonaryVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[1]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[2]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicArteries.extraSubstanceAmounts[3]:VARIABLE(start = systemicArteries.tm_start * systemicArteries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[1]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[2]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         systemicVeins.extraSubstanceAmounts[3]:VARIABLE(start = systemicVeins.tm_start * systemicVeins.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3]:VARIABLE(start = respiratoryUnit[1].pulmCapysVentilated.tm_start * respiratoryUnit[1].pulmCapysVentilated.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[1] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[2] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
         tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3]:VARIABLE(start = tissueUnit[1].systemicCapillaries.tm_start * tissueUnit[1].systemicCapillaries.C_start[3] fixed = true )  \"Current amount of extra substances\" type: Real [1,3]
Notification: Model statistics after passing the back-end for initialization:
 * Number of independent subsystems: 1567
 * Number of states: 0 ()
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for initialization (4024):
 * Single equations (assignments): 3985
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 20
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,3), (4,28), (1,1), (1,3), (6,9), (1,3), (1,1), (5,10), (1,3), (6,9), (1,3), (1,2), (5,10), (1,3)}
Notification: Performance of prepare postOptimizeDAE: time 0.01998/4.746, allocations: 2.355 MB / 1.82 GB, free: 64.08 MB / 0.5578 GB
Notification: Performance of postOpt lateInlineFunction (simulation): time 0.01547/4.762, allocations: 2.557 MB / 1.822 GB, free: 61.87 MB / 0.5578 GB
Notification: Performance of postOpt wrapFunctionCalls (simulation): time 0.3889/5.151, allocations: 50.68 MB / 1.872 GB, free: 146.4 MB / 0.5578 GB
Notification: Performance of postOpt inlineArrayEqn (simulation): time 0.09889/5.25, allocations: 37.56 MB / 1.909 GB, free: 142.4 MB / 0.5578 GB
Notification: Performance of postOpt constantLinearSystem (simulation): time 0.0001001/5.25, allocations: 0.6562 kB / 1.909 GB, free: 142.4 MB / 0.5578 GB
Notification: Performance of postOpt simplifysemiLinear (simulation): time 0.0008291/5.251, allocations: 121.8 kB / 1.909 GB, free: 142.4 MB / 0.5578 GB
Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.1672/5.418, allocations: 90.51 MB / 1.997 GB, free: 79.15 MB / 0.5578 GB
Notification: Performance of postOpt simplifyComplexFunction (simulation): time 0.0001309/5.418, allocations: 0 / 1.997 GB, free: 79.15 MB / 0.5578 GB
Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.01706/5.435, allocations: 5.831 MB / 2.003 GB, free: 74.48 MB / 0.5578 GB
Notification: Performance of postOpt tearingSystem (simulation): time 0.07489/5.51, allocations: 13.65 MB / 2.016 GB, free: 61.13 MB / 0.5578 GB
Notification: Performance of postOpt inputDerivativesUsed (simulation): time 0.006103/5.516, allocations: 0.9254 MB / 2.017 GB, free: 60.2 MB / 0.5578 GB
Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 0.007259/5.523, allocations: 16.9 MB / 2.034 GB, free: 42.8 MB / 0.5578 GB
Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.547e-06/5.523, allocations: 4 kB / 2.034 GB, free: 42.8 MB / 0.5578 GB
Notification: Performance of postOpt symbolicJacobian (simulation): time 0.3731/5.896, allocations: 68.22 MB / 2.1 GB, free: 138.7 MB / 0.5578 GB
Notification: Performance of postOpt removeConstants (simulation): time 0.01819/5.915, allocations: 7.096 MB / 2.107 GB, free: 138.7 MB / 0.5578 GB
Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.008305/5.923, allocations: 0.6523 MB / 2.108 GB, free: 138.7 MB / 0.5578 GB
Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.01694/5.94, allocations: 1.621 MB / 2.109 GB, free: 138.7 MB / 0.5578 GB
Notification: Performance of postOpt findZeroCrossings (simulation): time 0.007404/5.947, allocations: 2.556 MB / 2.112 GB, free: 138.7 MB / 0.5578 GB
Notification: Performance of postOpt collapseArrayExpressions (simulation): time 0.0046/5.952, allocations: 1.358 MB / 2.113 GB, free: 138.7 MB / 0.5578 GB
Notification: Performance of sorting global known variables: time 0.01039/5.962, allocations: 5.96 MB / 2.119 GB, free: 138.3 MB / 0.5578 GB
Notification: Performance of sort global known variables: time 3.41e-07/5.962, allocations: 3.656 kB / 2.119 GB, free: 138.3 MB / 0.5578 GB
Notification: Performance of remove unused functions: time 0.03357/5.996, allocations: 12.04 MB / 2.131 GB, free: 137.8 MB / 0.5578 GB
Notification: Model statistics after passing the back-end for simulation:
 * Number of independent subsystems: 1
 * Number of states: 263 (pulmonaryArteries.enthalpy,pulmonaryArteries.extraSubstanceAmounts[1],pulmonaryArteries.extraSubstanceAmounts[2],pulmonaryArteries.extraSubstanceAmounts[3],pulmonaryArteries.substanceMasses[1],pulmonaryArteries.substanceMasses[2],pulmonaryArteries.substanceMasses[3],pulmonaryArteries.substanceMasses[4],pulmonaryArteries.substanceMasses[5],pulmonaryArteries.substanceMasses[6],pulmonaryArteries.substanceMasses[7],pulmonaryArteries.substanceMasses[8],pulmonaryArteries.substanceMasses[9],pulmonaryArteries.substanceMasses[10],pulmonaryArteries.substanceMasses[11],pulmonaryArteries.substanceMasses[12],pulmonaryArteries.substanceMasses[13],pulmonaryArteries.substanceMasses[14],pulmonaryArteries.substanceMasses[15],pulmonaryArteries.substanceMasses[16],pulmonaryArteries.substanceMasses[17],pulmonaryArteries.substanceMasses[18],pulmonaryArteries.substanceMasses[19],pulmonaryArteries.substanceMasses[20],pulmonaryArteries.substanceMasses[21],pulmonaryArteries.substanceMasses[22],pulmonaryArteries.substanceMasses[23],pulmonaryArteries.substanceMasses[24],pulmonaryArteries.substanceMasses[25],pulmonaryArteries.substanceMasses[26],pulmonaryArteries.substanceMasses[27],pulmonaryArteries.substanceMasses[28],pulmonaryArteries.substanceMasses[29],pulmonaryArteries.substanceMasses[30],pulmonaryArteries.substanceMasses[31],pulmonaryArteries.substanceMasses[32],pulmonaryArteries.substanceMasses[33],pulmonaryArteries.substanceMasses[34],pulmonaryArteries.substanceMasses[35],pulmonaryArteries.substanceMasses[36],pulmonaryArteries.substanceMasses[37],pulmonaryArteries.substanceMasses[38],pulmonaryArteries.substanceMasses[39],pulmonaryVeins.enthalpy,pulmonaryVeins.extraSubstanceAmounts[1],pulmonaryVeins.extraSubstanceAmounts[2],pulmonaryVeins.extraSubstanceAmounts[3],pulmonaryVeins.substanceMasses[1],pulmonaryVeins.substanceMasses[2],pulmonaryVeins.substanceMasses[3],pulmonaryVeins.substanceMasses[4],pulmonaryVeins.substanceMasses[5],pulmonaryVeins.substanceMasses[6],pulmonaryVeins.substanceMasses[7],pulmonaryVeins.substanceMasses[8],pulmonaryVeins.substanceMasses[9],pulmonaryVeins.substanceMasses[10],pulmonaryVeins.substanceMasses[11],pulmonaryVeins.substanceMasses[12],pulmonaryVeins.substanceMasses[13],pulmonaryVeins.substanceMasses[14],pulmonaryVeins.substanceMasses[15],pulmonaryVeins.substanceMasses[16],pulmonaryVeins.substanceMasses[17],pulmonaryVeins.substanceMasses[18],pulmonaryVeins.substanceMasses[19],pulmonaryVeins.substanceMasses[20],pulmonaryVeins.substanceMasses[21],pulmonaryVeins.substanceMasses[22],pulmonaryVeins.substanceMasses[23],pulmonaryVeins.substanceMasses[24],pulmonaryVeins.substanceMasses[25],pulmonaryVeins.substanceMasses[26],pulmonaryVeins.substanceMasses[27],pulmonaryVeins.substanceMasses[28],pulmonaryVeins.substanceMasses[29],pulmonaryVeins.substanceMasses[30],pulmonaryVeins.substanceMasses[31],pulmonaryVeins.substanceMasses[32],pulmonaryVeins.substanceMasses[33],pulmonaryVeins.substanceMasses[34],pulmonaryVeins.substanceMasses[35],pulmonaryVeins.substanceMasses[36],pulmonaryVeins.substanceMasses[37],pulmonaryVeins.substanceMasses[38],pulmonaryVeins.substanceMasses[39],systemicArteries.chemicalSolution.substanceMasses[1],systemicArteries.chemicalSolution.substanceMasses[2],systemicArteries.chemicalSolution.substanceMasses[3],systemicArteries.chemicalSolution.substanceMasses[4],systemicArteries.chemicalSolution.substanceMasses[5],systemicArteries.chemicalSolution.substanceMasses[6],systemicArteries.chemicalSolution.substanceMasses[7],systemicArteries.chemicalSolution.substanceMasses[8],systemicArteries.chemicalSolution.substanceMasses[9],systemicArteries.chemicalSolution.substanceMasses[10],systemicArteries.chemicalSolution.substanceMasses[11],systemicArteries.chemicalSolution.substanceMasses[12],systemicArteries.chemicalSolution.substanceMasses[13],systemicArteries.chemicalSolution.substanceMasses[14],systemicArteries.chemicalSolution.substanceMasses[15],systemicArteries.chemicalSolution.substanceMasses[16],systemicArteries.chemicalSolution.substanceMasses[17],systemicArteries.chemicalSolution.substanceMasses[18],systemicArteries.chemicalSolution.substanceMasses[19],systemicArteries.chemicalSolution.substanceMasses[20],systemicArteries.chemicalSolution.substanceMasses[21],systemicArteries.chemicalSolution.substanceMasses[22],systemicArteries.chemicalSolution.substanceMasses[23],systemicArteries.chemicalSolution.substanceMasses[24],systemicArteries.chemicalSolution.substanceMasses[25],systemicArteries.chemicalSolution.substanceMasses[26],systemicArteries.chemicalSolution.substanceMasses[27],systemicArteries.chemicalSolution.substanceMasses[28],systemicArteries.chemicalSolution.substanceMasses[29],systemicArteries.chemicalSolution.substanceMasses[30],systemicArteries.chemicalSolution.substanceMasses[31],systemicArteries.chemicalSolution.substanceMasses[32],systemicArteries.chemicalSolution.substanceMasses[33],systemicArteries.chemicalSolution.substanceMasses[34],systemicArteries.chemicalSolution.substanceMasses[35],systemicArteries.chemicalSolution.substanceMasses[36],systemicArteries.chemicalSolution.substanceMasses[37],systemicArteries.chemicalSolution.substanceMasses[38],systemicArteries.chemicalSolution.substanceMasses[39],systemicArteries.enthalpy,systemicArteries.extraSubstanceAmounts[1],systemicArteries.extraSubstanceAmounts[2],systemicArteries.extraSubstanceAmounts[3],systemicVeins.chemicalSolution.substanceMasses[1],systemicVeins.chemicalSolution.substanceMasses[2],systemicVeins.chemicalSolution.substanceMasses[3],systemicVeins.chemicalSolution.substanceMasses[4],systemicVeins.chemicalSolution.substanceMasses[5],systemicVeins.chemicalSolution.substanceMasses[6],systemicVeins.chemicalSolution.substanceMasses[7],systemicVeins.chemicalSolution.substanceMasses[8],systemicVeins.chemicalSolution.substanceMasses[9],systemicVeins.chemicalSolution.substanceMasses[10],systemicVeins.chemicalSolution.substanceMasses[11],systemicVeins.chemicalSolution.substanceMasses[12],systemicVeins.chemicalSolution.substanceMasses[13],systemicVeins.chemicalSolution.substanceMasses[14],systemicVeins.chemicalSolution.substanceMasses[15],systemicVeins.chemicalSolution.substanceMasses[16],systemicVeins.chemicalSolution.substanceMasses[17],systemicVeins.chemicalSolution.substanceMasses[18],systemicVeins.chemicalSolution.substanceMasses[19],systemicVeins.chemicalSolution.substanceMasses[20],systemicVeins.chemicalSolution.substanceMasses[21],systemicVeins.chemicalSolution.substanceMasses[22],systemicVeins.chemicalSolution.substanceMasses[23],systemicVeins.chemicalSolution.substanceMasses[24],systemicVeins.chemicalSolution.substanceMasses[25],systemicVeins.chemicalSolution.substanceMasses[26],systemicVeins.chemicalSolution.substanceMasses[27],systemicVeins.chemicalSolution.substanceMasses[28],systemicVeins.chemicalSolution.substanceMasses[29],systemicVeins.chemicalSolution.substanceMasses[30],systemicVeins.chemicalSolution.substanceMasses[31],systemicVeins.chemicalSolution.substanceMasses[32],systemicVeins.chemicalSolution.substanceMasses[33],systemicVeins.chemicalSolution.substanceMasses[34],systemicVeins.chemicalSolution.substanceMasses[35],systemicVeins.chemicalSolution.substanceMasses[36],systemicVeins.chemicalSolution.substanceMasses[37],systemicVeins.chemicalSolution.substanceMasses[38],systemicVeins.chemicalSolution.substanceMasses[39],systemicVeins.enthalpy,systemicVeins.extraSubstanceAmounts[1],systemicVeins.extraSubstanceAmounts[2],systemicVeins.extraSubstanceAmounts[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[1],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[2],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[3],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[4],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[5],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[6],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[7],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[8],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[9],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[10],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[11],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[12],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[13],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[14],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[15],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[16],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[17],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[18],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[19],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[20],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[21],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[22],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[23],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[24],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[25],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[26],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[27],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[28],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[29],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[30],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[31],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[32],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[33],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[34],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[35],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[36],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[37],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[38],respiratoryUnit[1].pulmCapysVentilated.chemicalSolution.substanceMasses[39],respiratoryUnit[1].pulmCapysVentilated.enthalpy,respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[1],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[2],respiratoryUnit[1].pulmCapysVentilated.extraSubstanceAmounts[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[1],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[2],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[3],respiratoryUnit[1].alveoli.chemicalSolution.substanceMasses[4],respiratoryUnit[1].alveoli.enthalpy,tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[1],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[2],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[3],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[4],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[5],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[6],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[7],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[8],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[9],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[10],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[11],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[12],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[13],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[14],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[15],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[16],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[17],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[18],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[19],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[20],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[21],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[22],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[23],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[24],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[25],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[26],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[27],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[28],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[29],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[30],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[31],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[32],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[33],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[34],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[35],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[36],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[37],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[38],tissueUnit[1].systemicCapillaries.chemicalSolution.substanceMasses[39],tissueUnit[1].systemicCapillaries.enthalpy,tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[1],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[2],tissueUnit[1].systemicCapillaries.extraSubstanceAmounts[3])
 * Number of discrete variables: 0 ()
 * Number of discrete states: 0 ()
 * Number of clocked states: 0 ()
 * Top-level inputs: 0
Notification: Strong component statistics for simulation (2862):
 * Single equations (assignments): 2827
 * Array equations: 0
 * Algorithm blocks: 0
 * Record equations: 16
 * When equations: 0
 * If-equations: 0
 * Equation systems (not torn): 0
 * Torn equation systems: 19
 * Mixed (continuous/discrete) equation systems: 0
Notification: Torn system details for strict tearing set:
 * Linear torn systems (#iteration vars, #inner vars, density): 0 systems
 * Non-linear torn systems (#iteration vars, #inner vars): 19 systems
   {(1,1), (1,1), (1,1), (1,1), (1,1), (1,4), (9,30), (1,1), (1,4), (5,11), (1,4), (1,1), (5,11), (1,4), (5,11), (1,4), (1,3), (6,10), (1,4)}
Notification: Performance of Backend phase and start with SimCode phase: time 0.0106/6.006, allocations: 2.687 MB / 2.133 GB, free: 137.7 MB / 0.5578 GB
Notification: Performance of simCode: created initialization part: time 0.06696/6.073, allocations: 38.32 MB / 2.171 GB, free: 107.1 MB / 0.5578 GB
Notification: Performance of simCode: created event and clocks part: time 1.073e-05/6.073, allocations: 0 / 2.171 GB, free: 107.1 MB / 0.5578 GB
Notification: Performance of simCode: created simulation system equations: time 0.02937/6.103, allocations: 19.33 MB / 2.19 GB, free: 89.56 MB / 0.5578 GB
Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.05199/6.155, allocations: 15.44 MB / 2.205 GB, free: 76.85 MB / 0.5578 GB
Error: Error parsing unit kcal: Unit not found
Error: Error parsing unit kcal/kg: Unit not found
Error: Error parsing unit %: Parse error
Error: Error parsing unit kcal/min: Unit not found
Error: Error parsing unit kDa: Unit not found
Error: Error parsing unit l/(cmH2O.s): Unit not found
Error: Error parsing unit meq/min: Unit not found
Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.3146/6.469, allocations: 78.02 MB / 2.281 GB, free: 136.4 MB / 0.5578 GB
Notification: Performance of simCode: some other stuff during SimCode phase: time 0.01688/6.486, allocations: 7.981 MB / 2.289 GB, free: 135.5 MB / 0.5578 GB
Notification: Performance of simCode: alias equations: time 0.04255/6.529, allocations: 13.97 MB / 2.302 GB, free: 134.8 MB / 0.5578 GB
Notification: Performance of simCode: all other stuff during SimCode phase: time 0.01592/6.545, allocations: 2.81 MB / 2.305 GB, free: 134.8 MB / 0.5578 GB
Notification: Performance of SimCode: time 2.114e-06/6.545, allocations: 0 / 2.305 GB, free: 134.8 MB / 0.5578 GB
Notification: Performance of Templates: time 1.317/7.862, allocations: 0.7616 GB / 3.067 GB, free: 50.19 MB / 0.589 GB
"
[Timeout remaining time 652]
make -j1 -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.makefile [Timeout 660]
(rm -f Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; mkfifo Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe ; head -c 1048576 < Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe >> ../files/Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.sim & ./Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary -abortSlowSimulation -alarm=240  -lv LOG_STATS > Physiolibrary_Physiolibrary.Fluid.Examples.BloodGasesTransport.BloodyMary.pipe 2>&1) [Timeout 240]
[Calling sys.exit(0), Time elapsed: 34.135430433321744]