Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.conf.json loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0008962/0.0008962, allocations: 92.22 kB / 19.65 MB, free: 276 kB / 13.93 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.001503/0.001503, allocations: 173 kB / 23.03 MB, free: 1.543 MB / 18.57 MB " [Timeout remaining time 180] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180] "Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 0.9248/0.9248, allocations: 177.1 MB / 203.4 MB, free: 5.629 MB / 186.7 MB " [Timeout remaining time 179] loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo", uses=false) [Timeout 180] "[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/Examples/package.order:0:0-0:0:readonly] Warning: The package.order file does not list all .mo files and directories (containing package.mo) present in its directory. Missing names are: Paracetamol_Experiment Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo): time 1.61/1.61, allocations: 273.5 MB / 0.5209 GB, free: 14.82 MB / 458.7 MB " [Timeout remaining time 178] Using package Pharmacolibrary with version 25.09 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Pharmacolibrary 25.9.0/package.mo) Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo) Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo) Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo) Running command: translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") translateModel(Pharmacolibrary.Examples.Paracetamol_Experiment,tolerance=1e-06,outputFormat="empty",numberOfIntervals=8640,variableFilter="",fileNamePrefix="Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment") [Timeout 660] "Notification: Performance of FrontEnd - loaded program: time 1.512e-06/1.512e-06, allocations: 0 / 0.6469 GB, free: 38.69 MB / 0.5262 GB Notification: Performance of FrontEnd - Absyn->SCode: time 1.375e-05/1.526e-05, allocations: 2.312 kB / 0.6469 GB, free: 38.69 MB / 0.5262 GB Notification: Performance of NFInst.instantiate(Pharmacolibrary.Examples.Paracetamol_Experiment): time 0.004682/0.004698, allocations: 6.997 MB / 0.6538 GB, free: 34.09 MB / 0.5262 GB Notification: Performance of NFInst.instExpressions: time 0.001589/0.006286, allocations: 1.292 MB / 0.655 GB, free: 33.2 MB / 0.5262 GB Notification: Performance of NFInst.updateImplicitVariability: time 0.000194/0.00648, allocations: 9.844 kB / 0.655 GB, free: 33.19 MB / 0.5262 GB Notification: Performance of NFTyping.typeComponents: time 0.0002228/0.006703, allocations: 115.3 kB / 0.6552 GB, free: 33.12 MB / 0.5262 GB Notification: Performance of NFTyping.typeBindings: time 0.0004034/0.007106, allocations: 338.8 kB / 0.6555 GB, free: 32.88 MB / 0.5262 GB Notification: Performance of NFTyping.typeClassSections: time 0.0004262/0.007533, allocations: 292.2 kB / 0.6558 GB, free: 32.68 MB / 0.5262 GB Notification: Performance of NFFlatten.flatten: time 0.0008522/0.008385, allocations: 1.216 MB / 0.6569 GB, free: 31.99 MB / 0.5262 GB Notification: Performance of NFFlatten.resolveConnections: time 0.0002756/0.00866, allocations: 175.2 kB / 0.6571 GB, free: 31.88 MB / 0.5262 GB Notification: Performance of NFEvalConstants.evaluate: time 0.0004173/0.009078, allocations: 0.6253 MB / 0.6577 GB, free: 31.59 MB / 0.5262 GB Notification: Performance of NFSimplifyModel.simplify: time 0.0004008/0.009479, allocations: 359.2 kB / 0.6581 GB, free: 31.47 MB / 0.5262 GB Notification: Performance of NFPackage.collectConstants: time 0.0001013/0.00958, allocations: 108.5 kB / 0.6582 GB, free: 31.47 MB / 0.5262 GB Notification: Performance of NFFlatten.collectFunctions: time 0.0001174/0.009697, allocations: 110.6 kB / 0.6583 GB, free: 31.47 MB / 0.5262 GB Notification: Performance of NFScalarize.scalarize: time 9.271e-05/0.00979, allocations: 202.6 kB / 0.6585 GB, free: 31.32 MB / 0.5262 GB Notification: Performance of NFVerifyModel.verify: time 0.00024/0.01003, allocations: 354.2 kB / 0.6588 GB, free: 31.16 MB / 0.5262 GB Notification: Performance of NFConvertDAE.convert: time 0.0004614/0.01049, allocations: 0.7204 MB / 0.6595 GB, free: 30.77 MB / 0.5262 GB Notification: Performance of FrontEnd - DAE generated: time 2.184e-06/0.01049, allocations: 5.344 kB / 0.6595 GB, free: 30.76 MB / 0.5262 GB Notification: Performance of FrontEnd: time 6.81e-07/0.01049, allocations: 1.375 kB / 0.6595 GB, free: 30.76 MB / 0.5262 GB Notification: Performance of Transformations before backend: time 8.015e-06/0.0105, allocations: 0 / 0.6595 GB, free: 30.76 MB / 0.5262 GB Notification: Model statistics after passing the front-end and creating the data structures used by the back-end: * Number of equations: 144 * Number of variables: 144 Notification: Performance of Generate backend data structure: time 0.001169/0.01167, allocations: 1.407 MB / 0.6609 GB, free: 29.65 MB / 0.5262 GB Notification: Performance of prepare preOptimizeDAE: time 4.02e-05/0.01171, allocations: 10.81 kB / 0.6609 GB, free: 29.65 MB / 0.5262 GB Notification: Performance of preOpt normalInlineFunction (simulation): time 0.0001556/0.01187, allocations: 142.6 kB / 0.661 GB, free: 29.59 MB / 0.5262 GB Notification: Performance of preOpt evaluateParameters (simulation): time 0.0003842/0.01225, allocations: 439.9 kB / 0.6615 GB, free: 29.25 MB / 0.5262 GB Notification: Performance of preOpt simplifyIfEquations (simulation): time 3.178e-05/0.01228, allocations: 47.94 kB / 0.6615 GB, free: 29.23 MB / 0.5262 GB Notification: Performance of preOpt expandDerOperator (simulation): time 7.917e-05/0.01236, allocations: 71.88 kB / 0.6616 GB, free: 29.21 MB / 0.5262 GB Notification: Performance of preOpt clockPartitioning (simulation): time 0.0006909/0.01305, allocations: 0.6955 MB / 0.6622 GB, free: 28.78 MB / 0.5262 GB Notification: Performance of preOpt findStateOrder (simulation): time 2.567e-05/0.01308, allocations: 9.234 kB / 0.6623 GB, free: 28.77 MB / 0.5262 GB Notification: Performance of preOpt replaceEdgeChange (simulation): time 3.999e-05/0.01312, allocations: 27.91 kB / 0.6623 GB, free: 28.76 MB / 0.5262 GB Notification: Performance of preOpt inlineArrayEqn (simulation): time 1.743e-05/0.01314, allocations: 19.78 kB / 0.6623 GB, free: 28.75 MB / 0.5262 GB Notification: Performance of preOpt removeEqualRHS (simulation): time 0.0004429/0.01358, allocations: 466.1 kB / 0.6627 GB, free: 28.52 MB / 0.5262 GB Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.001358/0.01494, allocations: 1.935 MB / 0.6646 GB, free: 27.09 MB / 0.5262 GB Notification: Performance of preOpt comSubExp (simulation): time 0.0006161/0.01555, allocations: 0.5724 MB / 0.6652 GB, free: 26.71 MB / 0.5262 GB Notification: Performance of preOpt resolveLoops (simulation): time 0.0002492/0.0158, allocations: 336.5 kB / 0.6655 GB, free: 26.46 MB / 0.5262 GB Notification: Performance of preOpt evalFunc (simulation): time 3.664e-05/0.01584, allocations: 14.16 kB / 0.6655 GB, free: 26.46 MB / 0.5262 GB Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 0.0005861/0.01643, allocations: 0.9729 MB / 0.6665 GB, free: 25.7 MB / 0.5262 GB Notification: Performance of pre-optimization done (n=99): time 1.874e-06/0.01643, allocations: 0 / 0.6665 GB, free: 25.7 MB / 0.5262 GB Notification: Performance of matching and sorting (n=105): time 0.002775/0.0192, allocations: 2.957 MB / 0.6694 GB, free: 23.65 MB / 0.5262 GB Notification: Performance of inlineWhenForInitialization (initialization): time 0.0001522/0.01935, allocations: 0.5953 MB / 0.6699 GB, free: 22.95 MB / 0.5262 GB Notification: Performance of selectInitializationVariablesDAE (initialization): time 0.000417/0.01977, allocations: 0.5161 MB / 0.6705 GB, free: 22.68 MB / 0.5262 GB Notification: Performance of collectPreVariables (initialization): time 4.927e-05/0.01982, allocations: 62 kB / 0.6705 GB, free: 22.62 MB / 0.5262 GB Notification: Performance of collectInitialEqns (initialization): time 0.0001677/0.01999, allocations: 355.7 kB / 0.6709 GB, free: 22.33 MB / 0.5262 GB Notification: Performance of collectInitialBindings (initialization): time 0.0001783/0.02017, allocations: 343.6 kB / 0.6712 GB, free: 22.06 MB / 0.5262 GB Notification: Performance of simplifyInitialFunctions (initialization): time 0.0002074/0.02037, allocations: 199.3 kB / 0.6714 GB, free: 21.96 MB / 0.5262 GB Notification: Performance of setup shared object (initialization): time 0.0001164/0.02049, allocations: 0.5617 MB / 0.6719 GB, free: 21.43 MB / 0.5262 GB Notification: Performance of preBalanceInitialSystem (initialization): time 0.0003434/0.02083, allocations: 453.3 kB / 0.6724 GB, free: 21.09 MB / 0.5262 GB Notification: Performance of partitionIndependentBlocks (initialization): time 0.0004221/0.02126, allocations: 0.8653 MB / 0.6732 GB, free: 20.19 MB / 0.5262 GB Notification: Performance of analyzeInitialSystem (initialization): time 0.0009095/0.02217, allocations: 1.551 MB / 0.6747 GB, free: 18.77 MB / 0.5262 GB Notification: Performance of solveInitialSystemEqSystem (initialization): time 5.02e-06/0.02217, allocations: 2.781 kB / 0.6747 GB, free: 18.77 MB / 0.5262 GB Notification: Performance of matching and sorting (n=159) (initialization): time 0.001041/0.02321, allocations: 1.376 MB / 0.6761 GB, free: 17.89 MB / 0.5262 GB Notification: Performance of prepare postOptimizeDAE: time 6.316e-05/0.02328, allocations: 265.3 kB / 0.6763 GB, free: 17.6 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (initialization): time 1.172e-05/0.02329, allocations: 8.469 kB / 0.6763 GB, free: 17.6 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (initialization): time 2.281e-05/0.02331, allocations: 14.22 kB / 0.6763 GB, free: 17.6 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (initialization): time 0.0004882/0.0238, allocations: 252.8 kB / 0.6766 GB, free: 17.57 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (initialization): time 1.649e-05/0.02381, allocations: 24.5 kB / 0.6766 GB, free: 17.57 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (initialization): time 0.0002702/0.02409, allocations: 55.7 kB / 0.6766 GB, free: 17.55 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (initialization): time 5.223e-05/0.02414, allocations: 53.14 kB / 0.6767 GB, free: 17.54 MB / 0.5262 GB Warning: Assuming fixed start value for the following 30 variables: rapid_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real rapid_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real rapid_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real poor_met.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real poor_met.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.periodicDose.absorptionLumen.AUC:VARIABLE(unit = \"kg.s/m3\" fixed = true ) \"area under curve\" type: Real normal.periodicDose.variableDose.TotalCumulativeMass:VARIABLE(min = -1e-12 unit = \"kg\" fixed = true ) \"Total dose adminitrated by this source\" type: Real normal.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real poor_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.central.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmin:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real rapid_met.periodicDose.absorptionLumen.Cmax:DISCRETE(min = -1e-9 unit = \"kg/m3\" fixed = true ) type: Real normal.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean normal.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean poor_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.periodicDose.absorptionLumen.rising:DISCRETE(fixed = true protected = true ) type: Boolean rapid_met.central.rising:DISCRETE(fixed = true protected = true ) type: Boolean Notification: Model statistics after passing the back-end for initialization: * Number of independent subsystems: 36 * Number of states: 0 () * Number of discrete variables: 63 ($PRE.normal.central.Cmin,normal.central.Cmin,$PRE.normal.central.Cmax,normal.central.Cmax,$PRE.normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.Cmin,$PRE.normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmax,$PRE.poor_met.central.Cmin,poor_met.central.Cmin,$PRE.poor_met.central.Cmax,poor_met.central.Cmax,$PRE.poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.Cmin,$PRE.poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmax,$PRE.rapid_met.central.Cmin,rapid_met.central.Cmin,$PRE.rapid_met.central.Cmax,rapid_met.central.Cmax,$PRE.rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.Cmin,$PRE.rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmax,$PRE.normal.periodicDose.pulse.count,$PRE.normal.periodicDose.pulse.T_start,$PRE.normal.periodicDose.absorptionLumen.rising,$PRE.normal.central.rising,normal.periodicDose.pulse.count,normal.periodicDose.pulse.T_start,normal.periodicDose.absorptionLumen.rising,normal.central.rising,$whenCondition15,$whenCondition14,$whenCondition13,$whenCondition12,$whenCondition11,$PRE.poor_met.periodicDose.pulse.count,$PRE.poor_met.periodicDose.pulse.T_start,$PRE.poor_met.periodicDose.absorptionLumen.rising,$PRE.poor_met.central.rising,poor_met.periodicDose.pulse.count,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.absorptionLumen.rising,poor_met.central.rising,$whenCondition10,$whenCondition9,$whenCondition8,$whenCondition7,$whenCondition6,$PRE.rapid_met.periodicDose.pulse.count,$PRE.rapid_met.periodicDose.pulse.T_start,$PRE.rapid_met.periodicDose.absorptionLumen.rising,$PRE.rapid_met.central.rising,rapid_met.periodicDose.pulse.count,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.central.rising,$whenCondition5,$whenCondition4,$whenCondition3,$whenCondition2,$whenCondition1) * Number of discrete states: 0 () * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for initialization (150): * Single equations (assignments): 141 * Array equations: 0 * Algorithm blocks: 9 * Record equations: 0 * When equations: 0 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of prepare postOptimizeDAE: time 0.0003595/0.0245, allocations: 0.5545 MB / 0.6772 GB, free: 17.07 MB / 0.5262 GB Notification: Performance of postOpt lateInlineFunction (simulation): time 0.0001177/0.02461, allocations: 129.3 kB / 0.6774 GB, free: 17.01 MB / 0.5262 GB Notification: Performance of postOpt wrapFunctionCalls (simulation): time 8.223e-05/0.0247, allocations: 80.88 kB / 0.6774 GB, free: 16.95 MB / 0.5262 GB Notification: Performance of postOpt inlineArrayEqn (simulation): time 6.852e-06/0.0247, allocations: 13.06 kB / 0.6775 GB, free: 16.95 MB / 0.5262 GB Notification: Performance of postOpt constantLinearSystem (simulation): time 1.068e-05/0.02471, allocations: 0 / 0.6775 GB, free: 16.95 MB / 0.5262 GB Notification: Performance of postOpt simplifysemiLinear (simulation): time 1.056e-05/0.02472, allocations: 5.781 kB / 0.6775 GB, free: 16.95 MB / 0.5262 GB Notification: Performance of postOpt removeSimpleEquations (simulation): time 0.0017/0.02642, allocations: 2.146 MB / 0.6796 GB, free: 15.56 MB / 0.5262 GB Notification: Performance of postOpt simplifyComplexFunction (simulation): time 3.005e-06/0.02643, allocations: 5.25 kB / 0.6796 GB, free: 15.56 MB / 0.5262 GB Notification: Performance of postOpt solveSimpleEquations (simulation): time 0.0004471/0.02687, allocations: 164.3 kB / 0.6797 GB, free: 15.54 MB / 0.5262 GB Notification: Performance of postOpt tearingSystem (simulation): time 5.42e-06/0.02688, allocations: 2.938 kB / 0.6797 GB, free: 15.54 MB / 0.5262 GB Notification: Performance of postOpt inputDerivativesUsed (simulation): time 5.108e-05/0.02693, allocations: 33.14 kB / 0.6798 GB, free: 15.53 MB / 0.5262 GB Notification: Performance of postOpt calculateStrongComponentJacobians (simulation): time 6.372e-06/0.02694, allocations: 4.797 kB / 0.6798 GB, free: 15.53 MB / 0.5262 GB Notification: Performance of postOpt calculateStateSetsJacobians (simulation): time 3.086e-06/0.02694, allocations: 9.031 kB / 0.6798 GB, free: 15.52 MB / 0.5262 GB Notification: Performance of postOpt symbolicJacobian (simulation): time 0.001304/0.02824, allocations: 1.924 MB / 0.6816 GB, free: 14.25 MB / 0.5262 GB Notification: Performance of postOpt removeConstants (simulation): time 0.0002095/0.02845, allocations: 177 kB / 0.6818 GB, free: 14.14 MB / 0.5262 GB Notification: Performance of postOpt simplifyTimeIndepFuncCalls (simulation): time 0.0001004/0.02855, allocations: 48.97 kB / 0.6819 GB, free: 14.12 MB / 0.5262 GB Notification: Performance of postOpt simplifyAllExpressions (simulation): time 0.0002498/0.0288, allocations: 38.89 kB / 0.6819 GB, free: 14.11 MB / 0.5262 GB Notification: Performance of postOpt findZeroCrossings (simulation): time 0.0001538/0.02896, allocations: 103.2 kB / 0.682 GB, free: 14.08 MB / 0.5262 GB Notification: Performance of postOpt collapseArrayExpressions (simulation): time 3.893e-05/0.029, allocations: 36.39 kB / 0.682 GB, free: 14.07 MB / 0.5262 GB Notification: Performance of sorting global known variables: time 0.0002292/0.02923, allocations: 345.2 kB / 0.6824 GB, free: 13.9 MB / 0.5262 GB Notification: Performance of sort global known variables: time 7e-08/0.02923, allocations: 0 / 0.6824 GB, free: 13.9 MB / 0.5262 GB Notification: Performance of remove unused functions: time 0.0004695/0.0297, allocations: 245.4 kB / 0.6826 GB, free: 13.88 MB / 0.5262 GB Notification: Model statistics after passing the back-end for simulation: * Number of independent subsystems: 3 * Number of states: 21 (rapid_met.central.C,rapid_met.central.AUC,rapid_met.elim.MExc,rapid_met.periodicDose.TotalCumulativeMass,rapid_met.periodicDose.absorptionLumen.C,rapid_met.periodicDose.absorptionLumen.AUC,rapid_met.periodicDose.variableDose.TotalCumulativeMass,poor_met.central.C,poor_met.central.AUC,poor_met.elim.MExc,poor_met.periodicDose.TotalCumulativeMass,poor_met.periodicDose.absorptionLumen.C,poor_met.periodicDose.absorptionLumen.AUC,poor_met.periodicDose.variableDose.TotalCumulativeMass,normal.central.C,normal.central.AUC,normal.elim.MExc,normal.periodicDose.TotalCumulativeMass,normal.periodicDose.absorptionLumen.C,normal.periodicDose.absorptionLumen.AUC,normal.periodicDose.variableDose.TotalCumulativeMass) * Number of discrete variables: 39 ($whenCondition1,$whenCondition2,$whenCondition3,$whenCondition4,$whenCondition5,rapid_met.central.Cmax,rapid_met.central.Cmin,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmax,rapid_met.periodicDose.absorptionLumen.Cmin,rapid_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.T_start,rapid_met.periodicDose.pulse.count,$whenCondition6,$whenCondition7,$whenCondition8,$whenCondition9,$whenCondition10,poor_met.central.Cmax,poor_met.central.Cmin,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmax,poor_met.periodicDose.absorptionLumen.Cmin,poor_met.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.T_start,poor_met.periodicDose.pulse.count,$whenCondition11,$whenCondition12,$whenCondition13,$whenCondition14,$whenCondition15,normal.central.Cmax,normal.central.Cmin,normal.central.rising,normal.periodicDose.absorptionLumen.Cmax,normal.periodicDose.absorptionLumen.Cmin,normal.periodicDose.absorptionLumen.rising,normal.periodicDose.pulse.T_start,normal.periodicDose.pulse.count) * Number of discrete states: 33 (normal.periodicDose.pulse.count,normal.central.Cmin,$whenCondition15,normal.central.Cmax,$whenCondition14,normal.central.rising,normal.periodicDose.absorptionLumen.Cmin,$whenCondition13,normal.periodicDose.absorptionLumen.Cmax,$whenCondition12,normal.periodicDose.absorptionLumen.rising,poor_met.periodicDose.pulse.count,poor_met.central.Cmin,$whenCondition10,poor_met.central.Cmax,$whenCondition9,poor_met.central.rising,poor_met.periodicDose.absorptionLumen.Cmin,$whenCondition8,poor_met.periodicDose.absorptionLumen.Cmax,$whenCondition7,poor_met.periodicDose.absorptionLumen.rising,rapid_met.periodicDose.pulse.count,rapid_met.central.Cmin,$whenCondition5,rapid_met.central.Cmax,$whenCondition4,rapid_met.central.rising,rapid_met.periodicDose.absorptionLumen.Cmin,$whenCondition3,rapid_met.periodicDose.absorptionLumen.Cmax,$whenCondition2,rapid_met.periodicDose.absorptionLumen.rising) * Number of clocked states: 0 () * Top-level inputs: 0 Notification: Strong component statistics for simulation (87): * Single equations (assignments): 75 * Array equations: 0 * Algorithm blocks: 6 * Record equations: 0 * When equations: 6 * If-equations: 0 * Equation systems (not torn): 0 * Torn equation systems: 0 * Mixed (continuous/discrete) equation systems: 0 Notification: Performance of Backend phase and start with SimCode phase: time 0.0001436/0.02984, allocations: 199.4 kB / 0.6828 GB, free: 13.74 MB / 0.5262 GB Notification: Performance of simCode: created initialization part: time 0.0009199/0.03076, allocations: 1.5 MB / 0.6842 GB, free: 12.55 MB / 0.5262 GB Notification: Performance of simCode: created event and clocks part: time 1.883e-06/0.03076, allocations: 5.875 kB / 0.6843 GB, free: 12.55 MB / 0.5262 GB Notification: Performance of simCode: created simulation system equations: time 0.0004352/0.0312, allocations: 0.8145 MB / 0.685 GB, free: 11.9 MB / 0.5262 GB Notification: Performance of simCode: created of all other equations (e.g. parameter, nominal, assert, etc): time 0.0007811/0.03198, allocations: 271.7 kB / 0.6853 GB, free: 11.82 MB / 0.5262 GB Notification: Performance of simCode: created linear, non-linear and system jacobian parts: time 0.002967/0.03494, allocations: 2.298 MB / 0.6876 GB, free: 10.33 MB / 0.5262 GB Notification: Performance of simCode: some other stuff during SimCode phase: time 0.0001456/0.03509, allocations: 173.8 kB / 0.6877 GB, free: 10.25 MB / 0.5262 GB Notification: Performance of simCode: alias equations: time 0.00025/0.03534, allocations: 92.52 kB / 0.6878 GB, free: 10.23 MB / 0.5262 GB Notification: Performance of simCode: all other stuff during SimCode phase: time 0.000144/0.03548, allocations: 67.91 kB / 0.6879 GB, free: 10.22 MB / 0.5262 GB Notification: Performance of SimCode: time 1.152e-06/0.03548, allocations: 3.938 kB / 0.6879 GB, free: 10.21 MB / 0.5262 GB Notification: Performance of Templates: time 0.01458/0.05007, allocations: 14.73 MB / 0.7023 GB, free: 15.58 MB / 0.5418 GB " [Timeout remaining time 660] make -j1 -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.makefile [Timeout 660] (rm -f Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; mkfifo Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe ; head -c 1048576 < Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe >> ../files/Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.sim & ./Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment -abortSlowSimulation -alarm=240 -lv LOG_STATS > Pharmacolibrary_Pharmacolibrary.Examples.Paracetamol_Experiment.pipe 2>&1) [Timeout 240] [Calling sys.exit(0), Time elapsed: 4.848678457085043]