Running: ./testmodel.py --libraries=/home/hudson/saved_omc/libraries/.openmodelica/libraries --ompython_omhome=/usr Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_.conf.json
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo): time 0.0009495/0.0009495, allocations: 92.22 kB / 19.65 MB, free: 276 kB / 13.93 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo): time 0.0009475/0.0009475, allocations: 173 kB / 23.03 MB, free: 1.543 MB / 18.57 MB
"
[Timeout remaining time 180]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo): time 1.081/1.081, allocations: 177.1 MB / 203.4 MB, free: 5.633 MB / 186.7 MB
"
[Timeout remaining time 179]
loadFile("/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo", uses=false) [Timeout 180]
"Notification: Performance of loadFile(/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo): time 0.1056/0.1056, allocations: 17.47 MB / 277.4 MB, free: 11.54 MB / 266.7 MB
"
[Timeout remaining time 180]
Using package Chemical with version 2.0.1 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/package.mo)
Using package Modelica with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Modelica 4.1.0+maint.om/package.mo)
Using package Complex with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/Complex 4.1.0+maint.om/package.mo)
Using package ModelicaServices with version 4.1.0 (/home/hudson/saved_omc/libraries/.openmodelica/libraries/ModelicaServices 4.1.0+maint.om/package.mo)
Running command: translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_")
translateModel(Chemical.Examples.debug.EnzymeKinetics2_,tolerance=1e-06,outputFormat="empty",numberOfIntervals=2500,variableFilter="",fileNamePrefix="Chemical_master_Chemical.Examples.debug.EnzymeKinetics2_") [Timeout 660]
"Notification: Performance of FrontEnd - loaded program: time 1.814e-06/1.814e-06, allocations: 0 / 353.6 MB, free: 9.844 MB / 282.7 MB
Notification: Performance of FrontEnd - Absyn->SCode: time 2.825e-05/3.007e-05, allocations: 2.312 kB / 353.6 MB, free: 9.84 MB / 282.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Warning: An inner declaration for outer component system could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1343:7-1343:66:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"system\" component but
an inner \"system\" component is not defined.
For simulation drag Modelica.Fluid.System into your model
to specify system properties.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Warning: An inner declaration for outer component dropOfCommons could not be found and was automatically generated.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Boundaries.mo:1361:7-1361:76:writable] Notification: The diagnostics message for the missing inner is: 
Your model is using an outer \"dropOfCommons\" component but
an inner \"dropOfCommons\" component is not defined.
Use Chemical.DropOfCommons in your model
to specify system properties.
Notification: Performance of NFInst.instantiate(Chemical.Examples.debug.EnzymeKinetics2_): time 0.03631/0.03634, allocations: 36.1 MB / 389.7 MB, free: 5.844 MB / 314.7 MB
Notification: Performance of NFInst.instExpressions: time 0.01406/0.0504, allocations: 11.02 MB / 400.7 MB, free: 10.78 MB / 330.7 MB
Notification: Performance of NFInst.updateImplicitVariability: time 0.002283/0.05268, allocations: 87.31 kB / 400.8 MB, free: 10.7 MB / 330.7 MB
Notification: Performance of NFTyping.typeComponents: time 0.004138/0.05682, allocations: 2.001 MB / 402.8 MB, free: 8.684 MB / 330.7 MB
Notification: Performance of NFTyping.typeBindings: time 0.00462/0.06144, allocations: 1.54 MB / 404.3 MB, free: 7.133 MB / 330.7 MB
Notification: Performance of NFTyping.typeClassSections: time 0.006244/0.06768, allocations: 4.333 MB / 408.6 MB, free: 2.781 MB / 330.7 MB
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1332:3-1332:55:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.MM has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1333:3-1333:87:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.Hf has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1334:3-1334:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.H0 has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1336:3-1336:82:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.alow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1337:3-1337:79:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.blow has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1338:3-1338:84:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.ahigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 7)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1339:3-1339:81:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.bhigh has no value, and is fixed during initialization (fixed=true), using available start value (start=fill(0.0, 3)) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1341:3-1342:83:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.z has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1344:3-1344:89:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.phase has no value, and is fixed during initialization (fixed=true), using available start value (start=Chemical.Interfaces.Phase.Gas) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1347:3-1347:140:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmBase has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
[/home/hudson/saved_omc/libraries/.openmodelica/libraries/Chemical master/Interfaces.mo:1348:3-1348:137:writable] Warning: Parameter chemicalReaction.nextProducts[1].data.VmExcess has no value, and is fixed during initialization (fixed=true), using available start value (start=0.0) as default value.
Notification: Performance of NFFlatten.flatten: time 0.1517/0.2194, allocations: 3.628 MB / 412.3 MB, free: 36.11 MB / 330.7 MB
Notification: Performance of NFFlatten.resolveConnections: time 0.001126/0.2206, allocations: 0.548 MB / 412.8 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of NFEvalConstants.evaluate: time 0.00346/0.224, allocations: 2.051 MB / 414.9 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of NFSimplifyModel.simplify: time 0.002939/0.227, allocations: 1.633 MB / 416.5 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of NFPackage.collectConstants: time 0.0009978/0.228, allocations: 315.2 kB / 416.8 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of NFFlatten.collectFunctions: time 0.005251/0.2332, allocations: 2.049 MB / 418.8 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of NFScalarize.scalarize: time 0.001553/0.2348, allocations: 1.095 MB / 419.9 MB, free: 35.97 MB / 330.7 MB
Notification: Performance of NFVerifyModel.verify: time 0.002966/0.2377, allocations: 1.152 MB / 421.1 MB, free: 35.92 MB / 330.7 MB
Notification: Performance of NFConvertDAE.convert: time 0.00852/0.2462, allocations: 4.854 MB / 425.9 MB, free: 35.11 MB / 330.7 MB
Notification: Performance of FrontEnd - DAE generated: time 7.123e-06/0.2462, allocations: 0 / 425.9 MB, free: 35.11 MB / 330.7 MB
Notification: Performance of FrontEnd: time 1.743e-06/0.2462, allocations: 0 / 425.9 MB, free: 35.11 MB / 330.7 MB
Notification: Performance of Transformations before backend: time 0.0001653/0.2464, allocations: 0 / 425.9 MB, free: 35.11 MB / 330.7 MB
Notification: Model statistics after passing the front-end and creating the data structures used by the back-end:
 * Number of equations: 960
 * Number of variables: 960
Notification: Performance of Generate backend data structure: time 0.006851/0.2533, allocations: 4.717 MB / 430.7 MB, free: 32.46 MB / 330.7 MB
Notification: Performance of prepare preOptimizeDAE: time 5.13e-05/0.2533, allocations: 9.531 kB / 430.7 MB, free: 32.46 MB / 330.7 MB
Notification: Performance of preOpt normalInlineFunction (simulation): time 0.002298/0.2556, allocations: 1.706 MB / 432.4 MB, free: 31.79 MB / 330.7 MB
Notification: Performance of preOpt evaluateParameters (simulation): time 0.002403/0.258, allocations: 1.979 MB / 434.4 MB, free: 30.72 MB / 330.7 MB
Notification: Performance of preOpt simplifyIfEquations (simulation): time 0.0003016/0.2583, allocations: 0.5058 MB / 434.9 MB, free: 30.3 MB / 330.7 MB
Notification: Performance of preOpt expandDerOperator (simulation): time 0.0002872/0.2586, allocations: 299.3 kB / 435.2 MB, free: 30.21 MB / 330.7 MB
Notification: Performance of preOpt clockPartitioning (simulation): time 0.005199/0.2638, allocations: 4.437 MB / 439.6 MB, free: 28.49 MB / 330.7 MB
Notification: Performance of preOpt findStateOrder (simulation): time 4.115e-05/0.2638, allocations: 4.125 kB / 439.6 MB, free: 28.48 MB / 330.7 MB
Notification: Performance of preOpt replaceEdgeChange (simulation): time 0.0001381/0.264, allocations: 119.6 kB / 439.7 MB, free: 28.38 MB / 330.7 MB
Notification: Performance of preOpt inlineArrayEqn (simulation): time 0.0002897/0.2643, allocations: 476.5 kB / 440.2 MB, free: 27.91 MB / 330.7 MB
Notification: Performance of preOpt removeEqualRHS (simulation): time 0.005746/0.27, allocations: 5.697 MB / 445.9 MB, free: 22.21 MB / 330.7 MB
Notification: Performance of preOpt removeSimpleEquations (simulation): time 0.01865/0.2887, allocations: 15.7 MB / 461.6 MB, free: 6.738 MB / 330.7 MB
Notification: Performance of preOpt comSubExp (simulation): time 0.002185/0.2909, allocations: 1.28 MB / 462.9 MB, free: 5.457 MB / 330.7 MB
Notification: Performance of preOpt resolveLoops (simulation): time 0.001382/0.2922, allocations: 0.8717 MB / 463.7 MB, free: 4.582 MB / 330.7 MB
Notification: Performance of preOpt evalFunc (simulation): time 0.01274/0.305, allocations: 9.873 MB / 473.6 MB, free: 10.76 MB / 346.7 MB
Notification: Performance of preOpt encapsulateWhenConditions (simulation): time 4.491e-05/0.305, allocations: 46.7 kB / 473.6 MB, free: 10.7 MB / 346.7 MB
Notification: Performance of pre-optimization done (n=188): time 6.452e-06/0.305, allocations: 0 / 473.6 MB, free: 10.7 MB / 346.7 MB
Error: Internal error It is not possible to select continuous time states because Number of Equations 58 greater than number of States 57 to select from.
Error: Internal error Selection of DummyDerivatives failed due to negative system rank of -1!
           There are 31 unassigned equations and 30 potential states.
Error: Internal error - IndexReduction.selectDummyDerivatives2new failed!
Error: Internal error - IndexReduction.processComps4New failed!
Error: Internal error - IndexReduction.dynamicStateSelectionWork failed!
"
[Timeout remaining time 660]
[Calling sys.exit(0), Time elapsed: 2.186158189084381]